RNA–Protein interactions for RNA: ENST00000490564.1

NINJ1-205, Transcript of ninjurin 1, humanhuman

TSL 1 (best)

Gene NINJ1, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-205ENST00000490564 DEPDC1BQ8WUY9 529 aa11.17□□□□□ -0.62
NINJ1-205ENST00000490564 DNASE1L2Q92874 299 aa11.17□□□□□ -0.62
NINJ1-205ENST00000490564 SMARCE1Q969G3 411 aa11.17□□□□□ -0.62
NINJ1-205ENST00000490564 MYLPFQ96A32 169 aa11.17□□□□□ -0.62
NINJ1-205ENST00000490564 E2F7Q96AV8 911 aa11.17□□□□□ -0.62
NINJ1-205ENST00000490564 ELMO3Q96BJ8 720 aa11.17□□□□□ -0.62
NINJ1-205ENST00000490564 GCNAQ96QF7 691 aa11.17□□□□□ -0.62
NINJ1-205ENST00000490564 GTPBP4Q9BZE4 634 aaKnown RBP11.17□□□□□ -0.62
NINJ1-205ENST00000490564 SNX25Q9H3E2 840 aa11.17□□□□□ -0.62
NINJ1-205ENST00000490564 TBC1D17Q9HA65 648 aa11.17□□□□□ -0.62
NINJ1-205ENST00000490564 MAGEC2Q9UBF1 373 aaPredicted RBP11.17□□□□□ -0.62
NINJ1-205ENST00000490564 NXF1Q9UBU9 619 aaKnown RBP11.17□□□□□ -0.62
NINJ1-205ENST00000490564 PCDHA5Q9Y5H7 936 aa11.17□□□□□ -0.62
NINJ1-205ENST00000490564 DMDP11532 3685 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 SLC38A8A6NNN8 435 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 SOBPA7XYQ1 873 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 HEPACAM2A8MVW5 462 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 GALR2O43603 387 aaPredicted RBP11.16□□□□□ -0.62
NINJ1-205ENST00000490564 PI15O43692 258 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 GADD45BO75293 160 aaPredicted RBP11.16□□□□□ -0.62
NINJ1-205ENST00000490564 F11P03951 625 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 KRT13P13646 458 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 PSMC3P17980 439 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 VIPR2P41587 438 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 PTPN5P54829 565 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 NLRP12P59046 1061 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 CYP4F8P98187 520 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 PRKCQQ04759 706 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 GRM2Q14416 872 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 MLF2Q15773 248 aaPredicted RBP11.16□□□□□ -0.62
NINJ1-205ENST00000490564 DDR2Q16832 855 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 SGSM1Q2NKQ1 1148 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 SLC44A4Q53GD3 710 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 GPR158Q5T848 1215 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 SDHAF4Q5VUM1 108 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 VSTM1Q6UX27 236 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 TMEM150AQ86TG1 271 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 MFSD6LQ8IWD5 586 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 ZC3H3Q8IXZ2 948 aaKnown RBP11.16□□□□□ -0.62
NINJ1-205ENST00000490564 STKLD1Q8NE28 680 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 TAF4BQ92750 862 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 ERCC4Q92889 916 aaPredicted RBP11.16□□□□□ -0.62
NINJ1-205ENST00000490564 TRMT2BQ96GJ1 504 aaKnown RBP11.16□□□□□ -0.62
NINJ1-205ENST00000490564 PCED1BQ96HM7 432 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 SHDQ96IW2 340 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 MYRFLQ96LU7 910 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 CEP295NLQ96MC4 621 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 DDX23Q9BUQ8 820 aaKnown RBP11.16□□□□□ -0.62
NINJ1-205ENST00000490564 TRMT61BQ9BVS5 477 aaKnown RBP11.16□□□□□ -0.62
NINJ1-205ENST00000490564 DPEP3Q9H4B8 488 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 SLITRK6Q9H5Y7 841 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 TASP1Q9H6P5 420 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 SMYD3Q9H7B4 428 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 TRPV5Q9NQA5 729 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 OBP2AQ9NY56 170 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 UXTQ9UBK9 157 aaPredicted RBP11.16□□□□□ -0.62
NINJ1-205ENST00000490564 ZMYM5Q9UJ78 669 aa11.16□□□□□ -0.62
NINJ1-205ENST00000490564 A8MXQ7 604 aa11.15□□□□□ -0.62
NINJ1-205ENST00000490564 STK25O00506 426 aa11.15□□□□□ -0.62
NINJ1-205ENST00000490564 CETN3O15182 167 aa11.15□□□□□ -0.62
NINJ1-205ENST00000490564 KINO60870 393 aaKnown RBP11.15□□□□□ -0.62
NINJ1-205ENST00000490564 ASS1P00966 412 aaKnown RBP11.15□□□□□ -0.62
NINJ1-205ENST00000490564 HLA-DRAP01903 254 aa11.15□□□□□ -0.62
NINJ1-205ENST00000490564 TRIM49P0CI25 452 aa11.15□□□□□ -0.62
NINJ1-205ENST00000490564 TRIM49CP0CI26 452 aa11.15□□□□□ -0.62
NINJ1-205ENST00000490564 P4HA1P13674 534 aa11.15□□□□□ -0.62
NINJ1-205ENST00000490564 PTPN1P18031 435 aaKnown RBP11.15□□□□□ -0.62
NINJ1-205ENST00000490564 RFX1P22670 979 aa11.15□□□□□ -0.62
NINJ1-205ENST00000490564 BDNFP23560 247 aa11.15□□□□□ -0.62
NINJ1-205ENST00000490564 DDX6P26196 483 aaKnown RBP eCLIP11.15□□□□□ -0.62
NINJ1-205ENST00000490564 PIK3CAP42336 1068 aa11.15□□□□□ -0.62
NINJ1-205ENST00000490564 CDH8P55286 799 aa11.15□□□□□ -0.62
NINJ1-205ENST00000490564 CYP27A1Q02318 531 aa11.15□□□□□ -0.62
NINJ1-205ENST00000490564 NHLH1Q02575 133 aa11.15□□□□□ -0.62
NINJ1-205ENST00000490564 PPP3CAQ08209 521 aa11.15□□□□□ -0.62
NINJ1-205ENST00000490564 MDH1BQ5I0G3 518 aa11.15□□□□□ -0.62
NINJ1-205ENST00000490564 ARID3BQ8IVW6 561 aaPredicted RBP11.15□□□□□ -0.62
NINJ1-205ENST00000490564 ADSSL1Q8N142 457 aa11.15□□□□□ -0.62
NINJ1-205ENST00000490564 B3GALNT2Q8NCR0 500 aa11.15□□□□□ -0.62
NINJ1-205ENST00000490564 IRF7Q92985 503 aa11.15□□□□□ -0.62
NINJ1-205ENST00000490564 RSPRY1Q96DX4 576 aa11.15□□□□□ -0.62
NINJ1-205ENST00000490564 SPATA17Q96L03 361 aa11.15□□□□□ -0.62
NINJ1-205ENST00000490564 TSG101Q99816 390 aa11.15□□□□□ -0.62
NINJ1-205ENST00000490564 SDCBP2Q9H190 292 aa11.15□□□□□ -0.62
NINJ1-205ENST00000490564 TMEM8AQ9HCN3 771 aa11.15□□□□□ -0.62
NINJ1-205ENST00000490564 CHMP5Q9NZZ3 219 aa11.15□□□□□ -0.62
NINJ1-205ENST00000490564 MAN1B1Q9UKM7 699 aa11.15□□□□□ -0.62
NINJ1-205ENST00000490564 MAGED2Q9UNF1 606 aaPredicted RBP11.15□□□□□ -0.62
NINJ1-205ENST00000490564 KANSL1LA0AUZ9 987 aa11.14□□□□□ -0.63
NINJ1-205ENST00000490564 ARNTLO00327 626 aa11.14□□□□□ -0.63
NINJ1-205ENST00000490564 TRIM66O15016 1216 aa11.14□□□□□ -0.63
NINJ1-205ENST00000490564 CHADO15335 359 aa11.14□□□□□ -0.63
NINJ1-205ENST00000490564 TADA3O75528 432 aa11.14□□□□□ -0.63
NINJ1-205ENST00000490564 CLSTN1O94985 981 aa11.14□□□□□ -0.63
NINJ1-205ENST00000490564 EPB41P11171 864 aaKnown RBP11.14□□□□□ -0.63
NINJ1-205ENST00000490564 GDI1P31150 447 aa11.14□□□□□ -0.63
NINJ1-205ENST00000490564 GTF2H1P32780 548 aa11.14□□□□□ -0.63
NINJ1-205ENST00000490564 GRIK1P39086 918 aa11.14□□□□□ -0.63
NINJ1-205ENST00000490564 PPP1R2P41236 205 aa11.14□□□□□ -0.63
NINJ1-205ENST00000490564 ASPAP45381 313 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms