RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 CSH2P0DML3 217 aa20.82■□□□□ 0.92
TNFRSF1B-202ENST00000489921 SATB1Q01826 763 aa20.82■□□□□ 0.92
TNFRSF1B-202ENST00000489921 TAF12Q16514 161 aa20.82■□□□□ 0.92
TNFRSF1B-202ENST00000489921 DUOXA2Q1HG44 320 aa20.82■□□□□ 0.92
TNFRSF1B-202ENST00000489921 CFAP221Q4G0U5 840 aa20.82■□□□□ 0.92
TNFRSF1B-202ENST00000489921 DPH6Q7L8W6 267 aa20.82■□□□□ 0.92
TNFRSF1B-202ENST00000489921 RALGPS2Q86X27 583 aaPredicted RBP20.82■□□□□ 0.92
TNFRSF1B-202ENST00000489921 WDR49Q8IV35 697 aa20.82■□□□□ 0.92
TNFRSF1B-202ENST00000489921 CELF5Q8N6W0 485 aaKnown RBP20.82■□□□□ 0.92
TNFRSF1B-202ENST00000489921 RDH13Q8NBN7 331 aa20.82■□□□□ 0.92
TNFRSF1B-202ENST00000489921 TRMT2BQ96GJ1 504 aaKnown RBP20.82■□□□□ 0.92
TNFRSF1B-202ENST00000489921 MYRFLQ96LU7 910 aa20.82■□□□□ 0.92
TNFRSF1B-202ENST00000489921 GCNAQ96QF7 691 aa20.82■□□□□ 0.92
TNFRSF1B-202ENST00000489921 FAM126AQ9BYI3 521 aaPredicted RBP20.82■□□□□ 0.92
TNFRSF1B-202ENST00000489921 KIAA1586Q9HCI6 787 aa20.82■□□□□ 0.92
TNFRSF1B-202ENST00000489921 C2orf42Q9NWW7 574 aa20.82■□□□□ 0.92
TNFRSF1B-202ENST00000489921 NME7Q9Y5B8 376 aa20.82■□□□□ 0.92
TNFRSF1B-202ENST00000489921 ID4P47928 161 aa20.81■□□□□ 0.92
TNFRSF1B-202ENST00000489921 CUL4BQ13620 913 aa20.81■□□□□ 0.92
TNFRSF1B-202ENST00000489921 CCINQ13939 588 aa20.81■□□□□ 0.92
TNFRSF1B-202ENST00000489921 SURF1Q15526 300 aa20.81■□□□□ 0.92
TNFRSF1B-202ENST00000489921 SNRNP35Q16560 246 aaKnown RBP20.81■□□□□ 0.92
TNFRSF1B-202ENST00000489921 C1orf228Q6PIY5 440 aa20.81■□□□□ 0.92
TNFRSF1B-202ENST00000489921 Q6ZS52 159 aa20.81■□□□□ 0.92
TNFRSF1B-202ENST00000489921 TRAPPC11Q7Z392 1133 aa20.81■□□□□ 0.92
TNFRSF1B-202ENST00000489921 MON1AQ86VX9 555 aa20.81■□□□□ 0.92
TNFRSF1B-202ENST00000489921 ZNF516Q92618 1163 aa20.81■□□□□ 0.92
TNFRSF1B-202ENST00000489921 MAGEF1Q9HAY2 307 aa20.81■□□□□ 0.92
TNFRSF1B-202ENST00000489921 CRTAC1Q9NQ79 661 aa20.81■□□□□ 0.92
TNFRSF1B-202ENST00000489921 HPS4Q9NQG7 708 aa20.81■□□□□ 0.92
TNFRSF1B-202ENST00000489921 GKN1Q9NS71 199 aa20.81■□□□□ 0.92
TNFRSF1B-202ENST00000489921 ZMYM5Q9UJ78 669 aa20.81■□□□□ 0.92
TNFRSF1B-202ENST00000489921 RCOR1Q9UKL0 485 aa20.81■□□□□ 0.92
TNFRSF1B-202ENST00000489921 MAGED2Q9UNF1 606 aaPredicted RBP20.81■□□□□ 0.92
TNFRSF1B-202ENST00000489921 SOBPA7XYQ1 873 aa20.8■□□□□ 0.92
TNFRSF1B-202ENST00000489921 TNNC2P02585 160 aa20.8■□□□□ 0.92
TNFRSF1B-202ENST00000489921 PDIA4P13667 645 aaKnown RBP20.8■□□□□ 0.92
TNFRSF1B-202ENST00000489921 DDX6P26196 483 aaKnown RBP eCLIP20.8■□□□□ 0.92
TNFRSF1B-202ENST00000489921 PCSK1P29120 753 aa20.8■□□□□ 0.92
TNFRSF1B-202ENST00000489921 HOXC13P31276 330 aa20.8■□□□□ 0.92
TNFRSF1B-202ENST00000489921 RPL10AP62906 217 aaKnown RBP20.8■□□□□ 0.92
TNFRSF1B-202ENST00000489921 PLCB2Q00722 1185 aa20.8■□□□□ 0.92
TNFRSF1B-202ENST00000489921 MYO1EQ12965 1108 aa20.8■□□□□ 0.92
TNFRSF1B-202ENST00000489921 PSMD6Q15008 389 aa20.8■□□□□ 0.92
TNFRSF1B-202ENST00000489921 PON2Q15165 354 aa20.8■□□□□ 0.92
TNFRSF1B-202ENST00000489921 BMT2Q1RMZ1 405 aa20.8■□□□□ 0.92
TNFRSF1B-202ENST00000489921 NELFCDQ8IXH7 590 aa20.8■□□□□ 0.92
TNFRSF1B-202ENST00000489921 GRAMD1CQ8IYS0 662 aa20.8■□□□□ 0.92
TNFRSF1B-202ENST00000489921 SPEM1Q8N4L4 309 aa20.8■□□□□ 0.92
TNFRSF1B-202ENST00000489921 RMDN1Q96DB5 314 aa20.8■□□□□ 0.92
TNFRSF1B-202ENST00000489921 FUBP3Q96I24 572 aaKnown RBP eCLIP20.8■□□□□ 0.92
TNFRSF1B-202ENST00000489921 SLC22A12Q96S37 553 aa20.8■□□□□ 0.92
TNFRSF1B-202ENST00000489921 SLC39A2Q9NP94 309 aa20.8■□□□□ 0.92
TNFRSF1B-202ENST00000489921 TDP1Q9NUW8 608 aa20.8■□□□□ 0.92
TNFRSF1B-202ENST00000489921 UBE4BO95155 1302 aa20.79■□□□□ 0.92
TNFRSF1B-202ENST00000489921 PVALEFA0A1B0GWK0 134 aa20.79■□□□□ 0.92
TNFRSF1B-202ENST00000489921 K7ESF4 209 aa20.79■□□□□ 0.92
TNFRSF1B-202ENST00000489921 KLRC4O43908 158 aa20.79■□□□□ 0.92
TNFRSF1B-202ENST00000489921 WARSP23381 471 aaKnown RBP20.79■□□□□ 0.92
TNFRSF1B-202ENST00000489921 MAGEA11P43364 429 aa20.79■□□□□ 0.92
TNFRSF1B-202ENST00000489921 CXCL12P48061 93 aa20.79■□□□□ 0.92
TNFRSF1B-202ENST00000489921 ME1P48163 572 aa20.79■□□□□ 0.92
TNFRSF1B-202ENST00000489921 CCR3P51677 355 aa20.79■□□□□ 0.92
TNFRSF1B-202ENST00000489921 PSMC1P62191 440 aaKnown RBP20.79■□□□□ 0.92
TNFRSF1B-202ENST00000489921 DNM1Q05193 864 aaKnown RBP20.79■□□□□ 0.92
TNFRSF1B-202ENST00000489921 CYP24A1Q07973 514 aa20.79■□□□□ 0.92
TNFRSF1B-202ENST00000489921 DMWDQ09019 674 aa20.79■□□□□ 0.92
TNFRSF1B-202ENST00000489921 TRIM68Q6AZZ1 485 aa20.79■□□□□ 0.92
TNFRSF1B-202ENST00000489921 ATL3Q6DD88 541 aa20.79■□□□□ 0.92
TNFRSF1B-202ENST00000489921 HSCBQ8IWL3 235 aa20.79■□□□□ 0.92
TNFRSF1B-202ENST00000489921 CYP2S1Q96SQ9 504 aa20.79■□□□□ 0.92
TNFRSF1B-202ENST00000489921 SYT15Q9BQS2 421 aa20.79■□□□□ 0.92
TNFRSF1B-202ENST00000489921 CDH9Q9ULB4 789 aa20.79■□□□□ 0.92
TNFRSF1B-202ENST00000489921 PAPSS2O95340 614 aaPredicted RBP20.78■□□□□ 0.92
TNFRSF1B-202ENST00000489921 PDGFRBP09619 1106 aa20.78■□□□□ 0.92
TNFRSF1B-202ENST00000489921 TGM1P22735 817 aa20.78■□□□□ 0.92
TNFRSF1B-202ENST00000489921 AVPR1AP37288 418 aa20.78■□□□□ 0.92
TNFRSF1B-202ENST00000489921 AFMP43652 599 aa20.78■□□□□ 0.92
TNFRSF1B-202ENST00000489921 CYP2J2P51589 502 aa20.78■□□□□ 0.92
TNFRSF1B-202ENST00000489921 SNRPFP62306 86 aaKnown RBP20.78■□□□□ 0.92
TNFRSF1B-202ENST00000489921 ZNF268Q14587 947 aaPredicted RBP20.78■□□□□ 0.92
TNFRSF1B-202ENST00000489921 ITPRIPL2Q3MIP1 535 aa20.78■□□□□ 0.92
TNFRSF1B-202ENST00000489921 SPATA2LQ8IUW3 424 aaPredicted RBP20.78■□□□□ 0.92
TNFRSF1B-202ENST00000489921 C12orf56Q8IXR9 622 aa20.78■□□□□ 0.92
TNFRSF1B-202ENST00000489921 XXYLT1Q8NBI6 393 aa20.78■□□□□ 0.92
TNFRSF1B-202ENST00000489921 PLEKHO2Q8TD55 490 aa20.78■□□□□ 0.92
TNFRSF1B-202ENST00000489921 CGRRF1Q99675 332 aa20.78■□□□□ 0.92
TNFRSF1B-202ENST00000489921 MRPL45Q9BRJ2 306 aaKnown RBP20.78■□□□□ 0.92
TNFRSF1B-202ENST00000489921 THG1LQ9NWX6 298 aaKnown RBP20.78■□□□□ 0.92
TNFRSF1B-202ENST00000489921 SMG5Q9UPR3 1016 aaKnown RBP20.78■□□□□ 0.92
TNFRSF1B-202ENST00000489921 HELZP42694 1942 aaKnown RBP20.78■□□□□ 0.92
TNFRSF1B-202ENST00000489921 ACTN4O43707 911 aaKnown RBP20.77■□□□□ 0.92
TNFRSF1B-202ENST00000489921 DLATP10515 647 aaKnown RBP20.77■□□□□ 0.92
TNFRSF1B-202ENST00000489921 NRLP54845 237 aa20.77■□□□□ 0.92
TNFRSF1B-202ENST00000489921 RUNX3Q13761 415 aa20.77■□□□□ 0.92
TNFRSF1B-202ENST00000489921 LRRC32Q14392 662 aa20.77■□□□□ 0.92
TNFRSF1B-202ENST00000489921 DGKKQ5KSL6 1271 aa20.77■□□□□ 0.92
TNFRSF1B-202ENST00000489921 SPRYD3Q8NCJ5 442 aa20.77■□□□□ 0.92
TNFRSF1B-202ENST00000489921 MRPS31Q92665 395 aaKnown RBP20.77■□□□□ 0.92
TNFRSF1B-202ENST00000489921 MYLPFQ96A32 169 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms