RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 TRMT2BQ96GJ1 504 aaKnown RBP13.32□□□□□ -0.28
CPSF3-204ENST00000489403 CNTNAP3BQ96NU0 1288 aa13.32□□□□□ -0.28
CPSF3-204ENST00000489403 CNTNAP3Q9BZ76 1288 aa13.32□□□□□ -0.28
CPSF3-204ENST00000489403 MTMR12Q9C0I1 747 aa13.32□□□□□ -0.28
CPSF3-204ENST00000489403 PCIF1Q9H4Z3 704 aa13.32□□□□□ -0.28
CPSF3-204ENST00000489403 PDE11AQ9HCR9 933 aa13.32□□□□□ -0.28
CPSF3-204ENST00000489403 ABCB6Q9NP58 842 aa13.32□□□□□ -0.28
CPSF3-204ENST00000489403 GDAP2Q9NXN4 497 aa13.32□□□□□ -0.28
CPSF3-204ENST00000489403 SIX4Q9UIU6 781 aa13.32□□□□□ -0.28
CPSF3-204ENST00000489403 GTF3C4Q9UKN8 822 aa13.32□□□□□ -0.28
CPSF3-204ENST00000489403 PCDHB13Q9Y5F0 798 aa13.32□□□□□ -0.28
CPSF3-204ENST00000489403 SNX9Q9Y5X1 595 aa13.32□□□□□ -0.28
CPSF3-204ENST00000489403 MYO16Q9Y6X6 1858 aa13.31□□□□□ -0.28
CPSF3-204ENST00000489403 GABRDO14764 452 aa13.31□□□□□ -0.28
CPSF3-204ENST00000489403 RNF40O75150 1001 aa13.31□□□□□ -0.28
CPSF3-204ENST00000489403 EGFP01133 1207 aa13.31□□□□□ -0.28
CPSF3-204ENST00000489403 KRT19P08727 400 aa13.31□□□□□ -0.28
CPSF3-204ENST00000489403 TMEM191BP0C7N4 346 aa13.31□□□□□ -0.28
CPSF3-204ENST00000489403 PDCP20941 246 aa13.31□□□□□ -0.28
CPSF3-204ENST00000489403 STAT6P42226 847 aa13.31□□□□□ -0.28
CPSF3-204ENST00000489403 RPL10AP62906 217 aaKnown RBP13.31□□□□□ -0.28
CPSF3-204ENST00000489403 USP4Q13107 963 aa13.31□□□□□ -0.28
CPSF3-204ENST00000489403 ALCAMQ13740 583 aa13.31□□□□□ -0.28
CPSF3-204ENST00000489403 LMBRD2Q68DH5 695 aaPredicted RBP13.31□□□□□ -0.28
CPSF3-204ENST00000489403 NAIF1Q69YI7 327 aaPredicted RBP13.31□□□□□ -0.28
CPSF3-204ENST00000489403 CCDC73Q6ZRK6 1079 aa13.31□□□□□ -0.28
CPSF3-204ENST00000489403 ADGRF2Q8IZF7 708 aa13.31□□□□□ -0.28
CPSF3-204ENST00000489403 SYCP3Q8IZU3 236 aa13.31□□□□□ -0.28
CPSF3-204ENST00000489403 TOP6BLQ8N6T0 577 aa13.31□□□□□ -0.28
CPSF3-204ENST00000489403 NOC3LQ8WTT2 800 aaKnown RBP13.31□□□□□ -0.28
CPSF3-204ENST00000489403 TMEM206Q9H813 350 aa13.31□□□□□ -0.28
CPSF3-204ENST00000489403 FBRSL1Q9HCM7 1045 aaKnown RBP13.31□□□□□ -0.28
CPSF3-204ENST00000489403 PANK4Q9NVE7 773 aa13.31□□□□□ -0.28
CPSF3-204ENST00000489403 UXTQ9UBK9 157 aaPredicted RBP13.31□□□□□ -0.28
CPSF3-204ENST00000489403 ATG2BQ96BY7 2078 aa13.31□□□□□ -0.28
CPSF3-204ENST00000489403 KIAA1549LQ6ZVL6 1849 aa13.31□□□□□ -0.28
CPSF3-204ENST00000489403 HELZP42694 1942 aaKnown RBP13.31□□□□□ -0.28
CPSF3-204ENST00000489403 CCDC163A0A0D9SF12 145 aa13.3□□□□□ -0.28
CPSF3-204ENST00000489403 AXIN1O15169 862 aa13.3□□□□□ -0.28
CPSF3-204ENST00000489403 PRPF6O94906 941 aaKnown RBP13.3□□□□□ -0.28
CPSF3-204ENST00000489403 ADRB1P08588 477 aa13.3□□□□□ -0.28
CPSF3-204ENST00000489403 SYT1P21579 422 aa13.3□□□□□ -0.28
CPSF3-204ENST00000489403 GJA4P35212 333 aa13.3□□□□□ -0.28
CPSF3-204ENST00000489403 RBP5P82980 135 aa13.3□□□□□ -0.28
CPSF3-204ENST00000489403 FAM160A1Q05DH4 1040 aa13.3□□□□□ -0.28
CPSF3-204ENST00000489403 MTF1Q14872 753 aa13.3□□□□□ -0.28
CPSF3-204ENST00000489403 PDGFRLQ15198 375 aa13.3□□□□□ -0.28
CPSF3-204ENST00000489403 ZNF77Q15935 545 aa13.3□□□□□ -0.28
CPSF3-204ENST00000489403 SOWAHAQ2M3V2 549 aa13.3□□□□□ -0.28
CPSF3-204ENST00000489403 CFAP221Q4G0U5 840 aa13.3□□□□□ -0.28
CPSF3-204ENST00000489403 CC2D1AQ6P1N0 951 aaPredicted RBP13.3□□□□□ -0.28
CPSF3-204ENST00000489403 SPATA2LQ8IUW3 424 aaPredicted RBP13.3□□□□□ -0.28
CPSF3-204ENST00000489403 GPD1LQ8N335 351 aa13.3□□□□□ -0.28
CPSF3-204ENST00000489403 GLIS3Q8NEA6 775 aa13.3□□□□□ -0.28
CPSF3-204ENST00000489403 SPATA18Q8TC71 538 aa13.3□□□□□ -0.28
CPSF3-204ENST00000489403 GAB3Q8WWW8 586 aa13.3□□□□□ -0.28
CPSF3-204ENST00000489403 FUBP3Q96I24 572 aaKnown RBP eCLIP13.3□□□□□ -0.28
CPSF3-204ENST00000489403 ANKRD36BP1Q96IX9 119 aa13.3□□□□□ -0.28
CPSF3-204ENST00000489403 MYRFLQ96LU7 910 aa13.3□□□□□ -0.28
CPSF3-204ENST00000489403 USP28Q96RU2 1077 aa13.3□□□□□ -0.28
CPSF3-204ENST00000489403 SLC22A12Q96S37 553 aa13.3□□□□□ -0.28
CPSF3-204ENST00000489403 PANK2Q9BZ23 570 aa13.3□□□□□ -0.28
CPSF3-204ENST00000489403 TRPC7Q9HCX4 862 aa13.3□□□□□ -0.28
CPSF3-204ENST00000489403 POLR3BQ9NW08 1133 aaPredicted RBP13.3□□□□□ -0.28
CPSF3-204ENST00000489403 SLC8A2Q9UPR5 921 aa13.3□□□□□ -0.28
CPSF3-204ENST00000489403 MORC2Q9Y6X9 1032 aaPredicted RBP13.3□□□□□ -0.28
CPSF3-204ENST00000489403 PTPRDP23468 1912 aa13.3□□□□□ -0.28
CPSF3-204ENST00000489403 PTPRJQ12913 1337 aa13.3□□□□□ -0.28
CPSF3-204ENST00000489403 NCOR2Q9Y618 2525 aa13.3□□□□□ -0.28
CPSF3-204ENST00000489403 ATG13O75143 517 aa13.29□□□□□ -0.28
CPSF3-204ENST00000489403 RPP40O75818 363 aaKnown RBP13.29□□□□□ -0.28
CPSF3-204ENST00000489403 EPN2O95208 641 aa13.29□□□□□ -0.28
CPSF3-204ENST00000489403 DRD1P21728 446 aa13.29□□□□□ -0.28
CPSF3-204ENST00000489403 PCSK1P29120 753 aa13.29□□□□□ -0.28
CPSF3-204ENST00000489403 LHX1P48742 406 aa13.29□□□□□ -0.28
CPSF3-204ENST00000489403 GALK1P51570 392 aa13.29□□□□□ -0.28
CPSF3-204ENST00000489403 AMPD2Q01433 879 aa13.29□□□□□ -0.28
CPSF3-204ENST00000489403 CCDC6Q16204 474 aa13.29□□□□□ -0.28
CPSF3-204ENST00000489403 PPM1JQ5JR12 505 aa13.29□□□□□ -0.28
CPSF3-204ENST00000489403 FAM171BQ6P995 826 aa13.29□□□□□ -0.28
CPSF3-204ENST00000489403 LIMS2Q7Z4I7 341 aa13.29□□□□□ -0.28
CPSF3-204ENST00000489403 SCN4BQ8IWT1 228 aa13.29□□□□□ -0.28
CPSF3-204ENST00000489403 OR5B17Q8NGF7 314 aa13.29□□□□□ -0.28
CPSF3-204ENST00000489403 OSCP1Q8WVF1 389 aa13.29□□□□□ -0.28
CPSF3-204ENST00000489403 KBTBD7Q8WVZ9 684 aa13.29□□□□□ -0.28
CPSF3-204ENST00000489403 CYP2S1Q96SQ9 504 aa13.29□□□□□ -0.28
CPSF3-204ENST00000489403 P2RY13Q9BPV8 354 aa13.29□□□□□ -0.28
CPSF3-204ENST00000489403 ARRDC1-AS1Q9H2J1 176 aa13.29□□□□□ -0.28
CPSF3-204ENST00000489403 ECT2Q9H8V3 914 aa13.29□□□□□ -0.28
CPSF3-204ENST00000489403 DUS2Q9NX74 493 aaKnown RBP13.29□□□□□ -0.28
CPSF3-204ENST00000489403 WNT6Q9Y6F9 365 aa13.29□□□□□ -0.28
CPSF3-204ENST00000489403 SPAG17Q6Q759 2223 aa13.28□□□□□ -0.28
CPSF3-204ENST00000489403 TRAV19A0A0A6YYK7 116 aa13.28□□□□□ -0.28
CPSF3-204ENST00000489403 C2orf78A6NCI8 922 aa13.28□□□□□ -0.28
CPSF3-204ENST00000489403 KIAA0391O15091 583 aaKnown RBP13.28□□□□□ -0.28
CPSF3-204ENST00000489403 FOXD2O60548 495 aaPredicted RBP13.28□□□□□ -0.28
CPSF3-204ENST00000489403 ATP2C2O75185 946 aa13.28□□□□□ -0.28
CPSF3-204ENST00000489403 CKMP06732 381 aa13.28□□□□□ -0.28
CPSF3-204ENST00000489403 USP17L7P0C7H9 530 aa13.28□□□□□ -0.28
CPSF3-204ENST00000489403 CCDC192P0DO97 292 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms