RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 GPR15P49685 360 aa10.06□□□□□ -0.8
SNX17-207ENST00000489402 ALCAMQ13740 583 aa10.06□□□□□ -0.8
SNX17-207ENST00000489402 ZNF268Q14587 947 aaPredicted RBP10.06□□□□□ -0.8
SNX17-207ENST00000489402 FBXO43Q4G163 708 aa10.06□□□□□ -0.8
SNX17-207ENST00000489402 INTS6LQ5JSJ4 861 aaKnown RBP10.06□□□□□ -0.8
SNX17-207ENST00000489402 L1TD1Q5T7N2 865 aaKnown RBP10.06□□□□□ -0.8
SNX17-207ENST00000489402 SPATA2LQ8IUW3 424 aaPredicted RBP10.06□□□□□ -0.8
SNX17-207ENST00000489402 PDCL2Q8N4E4 241 aa10.06□□□□□ -0.8
SNX17-207ENST00000489402 CAMKK1Q8N5S9 505 aa10.06□□□□□ -0.8
SNX17-207ENST00000489402 CSGALNACT2Q8N6G5 542 aa10.06□□□□□ -0.8
SNX17-207ENST00000489402 LRRC52Q8N7C0 313 aa10.06□□□□□ -0.8
SNX17-207ENST00000489402 FSIP1Q8NA03 581 aa10.06□□□□□ -0.8
SNX17-207ENST00000489402 TTC16Q8NEE8 873 aa10.06□□□□□ -0.8
SNX17-207ENST00000489402 SPATA18Q8TC71 538 aa10.06□□□□□ -0.8
SNX17-207ENST00000489402 NOC3LQ8WTT2 800 aaKnown RBP10.06□□□□□ -0.8
SNX17-207ENST00000489402 SAAL1Q96ER3 474 aa10.06□□□□□ -0.8
SNX17-207ENST00000489402 TRMT2BQ96GJ1 504 aaKnown RBP10.06□□□□□ -0.8
SNX17-207ENST00000489402 EPSTI1Q96J88 318 aa10.06□□□□□ -0.8
SNX17-207ENST00000489402 P2RY13Q9BPV8 354 aa10.06□□□□□ -0.8
SNX17-207ENST00000489402 ARRDC1-AS1Q9H2J1 176 aa10.06□□□□□ -0.8
SNX17-207ENST00000489402 TMEM206Q9H813 350 aa10.06□□□□□ -0.8
SNX17-207ENST00000489402 RBAKQ9NYW8 714 aaPredicted RBP10.06□□□□□ -0.8
SNX17-207ENST00000489402 TBC1D7Q9P0N9 293 aa10.06□□□□□ -0.8
SNX17-207ENST00000489402 ITGA11Q9UKX5 1188 aa10.06□□□□□ -0.8
SNX17-207ENST00000489402 L1RE1Q9UN81 338 aa10.06□□□□□ -0.8
SNX17-207ENST00000489402 PCDHB13Q9Y5F0 798 aa10.06□□□□□ -0.8
SNX17-207ENST00000489402 ASPMQ8IZT6 3477 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 SPAG17Q6Q759 2223 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 KMT2BQ9UMN6 2715 aaPredicted RBP10.05□□□□□ -0.8
SNX17-207ENST00000489402 TRAV19A0A0A6YYK7 116 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 RNF40O75150 1001 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 NOL4O94818 638 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 EPN2O95208 641 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 EGFP01133 1207 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 CKMP06732 381 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 USP17L7P0C7H9 530 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 ZNF806P0C7X5 589 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 ARSAP15289 507 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 PDCP20941 246 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 GARTP22102 1010 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 ACAT1P24752 427 aaKnown RBP10.05□□□□□ -0.8
SNX17-207ENST00000489402 PCSK1P29120 753 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 IFNAR2P48551 515 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 LHX1P48742 406 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 LIMK1P53667 647 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 FAM160A1Q05DH4 1040 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 MYO1EQ12965 1108 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 NR1H3Q13133 447 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 KCNB1Q14721 858 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 MTF1Q14872 753 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 DDR2Q16832 855 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 SDHAF4Q5VUM1 108 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 KBTBD6Q86V97 674 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 SCN4BQ8IWT1 228 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 ADGRF2Q8IZF7 708 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 TOP6BLQ8N6T0 577 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 C1orf127Q8N9H9 656 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 SPDYE1Q8NFV5 336 aaPredicted RBP10.05□□□□□ -0.8
SNX17-207ENST00000489402 ATP2A3Q93084 1043 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 ACDQ96AP0 544 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 ANKRD36BP1Q96IX9 119 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 STRA6Q9BX79 667 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 ECT2Q9H8V3 914 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 FBRSL1Q9HCM7 1045 aaKnown RBP10.05□□□□□ -0.8
SNX17-207ENST00000489402 OLFML3Q9NRN5 406 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 DUS2Q9NX74 493 aaKnown RBP10.05□□□□□ -0.8
SNX17-207ENST00000489402 GTF3C4Q9UKN8 822 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 PCDHGA5Q9Y5G8 931 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 SNX9Q9Y5X1 595 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 CLIC4Q9Y696 253 aa10.05□□□□□ -0.8
SNX17-207ENST00000489402 HELZP42694 1942 aaKnown RBP10.04□□□□□ -0.8
SNX17-207ENST00000489402 GOLGA8IPA6NC78 632 aa10.04□□□□□ -0.8
SNX17-207ENST00000489402 MYMKA6NI61 221 aa10.04□□□□□ -0.8
SNX17-207ENST00000489402 GOLGA8JA6NMD2 632 aa10.04□□□□□ -0.8
SNX17-207ENST00000489402 KIAA0391O15091 583 aaKnown RBP10.04□□□□□ -0.8
SNX17-207ENST00000489402 TADA3O75528 432 aa10.04□□□□□ -0.8
SNX17-207ENST00000489402 CYP2F1P24903 491 aa10.04□□□□□ -0.8
SNX17-207ENST00000489402 GJA4P35212 333 aa10.04□□□□□ -0.8
SNX17-207ENST00000489402 STAT6P42226 847 aa10.04□□□□□ -0.8
SNX17-207ENST00000489402 RAP1GAPP47736 663 aa10.04□□□□□ -0.8
SNX17-207ENST00000489402 PDE6CP51160 858 aa10.04□□□□□ -0.8
SNX17-207ENST00000489402 GALK1P51570 392 aa10.04□□□□□ -0.8
SNX17-207ENST00000489402 CASP5P51878 434 aa10.04□□□□□ -0.8
SNX17-207ENST00000489402 RBP5P82980 135 aa10.04□□□□□ -0.8
SNX17-207ENST00000489402 PSMD2Q13200 908 aa10.04□□□□□ -0.8
SNX17-207ENST00000489402 SF3A2Q15428 464 aaKnown RBP10.04□□□□□ -0.8
SNX17-207ENST00000489402 ELF2Q15723 593 aa10.04□□□□□ -0.8
SNX17-207ENST00000489402 CCDC6Q16204 474 aa10.04□□□□□ -0.8
SNX17-207ENST00000489402 ST3GAL2Q16842 350 aa10.04□□□□□ -0.8
SNX17-207ENST00000489402 CFAP221Q4G0U5 840 aa10.04□□□□□ -0.8
SNX17-207ENST00000489402 C4orf50Q6ZRC1 276 aa10.04□□□□□ -0.8
SNX17-207ENST00000489402 CCDC73Q6ZRK6 1079 aa10.04□□□□□ -0.8
SNX17-207ENST00000489402 STXBP4Q6ZWJ1 553 aa10.04□□□□□ -0.8
SNX17-207ENST00000489402 RPLP0P6Q8NHW5 317 aa10.04□□□□□ -0.8
SNX17-207ENST00000489402 CCDC26Q8TAB7 109 aa10.04□□□□□ -0.8
SNX17-207ENST00000489402 OSCP1Q8WVF1 389 aa10.04□□□□□ -0.8
SNX17-207ENST00000489402 CD101Q93033 1021 aa10.04□□□□□ -0.8
SNX17-207ENST00000489402 DNAJC19Q96DA6 116 aa10.04□□□□□ -0.8
SNX17-207ENST00000489402 FUBP3Q96I24 572 aaKnown RBP eCLIP10.04□□□□□ -0.8
SNX17-207ENST00000489402 CHAMP1Q96JM3 812 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms