RNA–Protein interactions for RNA: ENST00000489318.1

C9orf3-220, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-220ENST00000489318 CARNS1A5YM72 827 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 I3L4J1 428 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 BUB1BO60566 1050 aaPredicted RBP12.15□□□□□ -0.46
C9orf3-220ENST00000489318 OAZ2O95190 189 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 ATP1A1P05023 1023 aaKnown RBP12.15□□□□□ -0.46
C9orf3-220ENST00000489318 GALTP07902 379 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 PDGFRBP09619 1106 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 CCDC130P13994 396 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 PRLRP16471 622 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 PTPN1P18031 435 aaKnown RBP12.15□□□□□ -0.46
C9orf3-220ENST00000489318 FGFR3P22607 806 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 PLA2G4AP47712 749 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 PSMC1P62191 440 aaKnown RBP12.15□□□□□ -0.46
C9orf3-220ENST00000489318 FPGSQ05932 587 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 ELAVL2Q12926 359 aaKnown RBP12.15□□□□□ -0.46
C9orf3-220ENST00000489318 MAMLD1Q13495 774 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 TUBB2AQ13885 445 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 MEI1Q5TIA1 1274 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 OVOS1Q6IE37 1185 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 FAM171BQ6P995 826 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 PAQR9Q6ZVX9 377 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 C16orf59Q7L2K0 433 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 ERICH1Q86X53 443 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 METTL23Q86XA0 190 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 MYCBPAPQ8TBZ2 947 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 SLC2A14Q8TDB8 520 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 HASPINQ8TF76 798 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 ZNF592Q92610 1267 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 CPXM1Q96SM3 734 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 TUBB2BQ9BVA1 445 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 COLEC11Q9BWP8 271 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 TLR10Q9BXR5 811 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 MIS12Q9H081 205 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 MRPL47Q9HD33 250 aaKnown RBP12.15□□□□□ -0.46
C9orf3-220ENST00000489318 HCSTQ9UBK5 93 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 HESX1Q9UBX0 185 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 PRKAG2Q9UGJ0 569 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 LCMT1Q9UIC8 334 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 PRG3Q9Y2Y8 225 aaPredicted RBP12.15□□□□□ -0.46
C9orf3-220ENST00000489318 TIMM13Q9Y5L4 95 aaPredicted RBP12.15□□□□□ -0.46
C9orf3-220ENST00000489318 MRFAP1Q9Y605 127 aa12.15□□□□□ -0.46
C9orf3-220ENST00000489318 SF3B1O75533 1304 aaKnown RBP eCLIP12.14□□□□□ -0.47
C9orf3-220ENST00000489318 XPO1O14980 1071 aaKnown RBP12.14□□□□□ -0.47
C9orf3-220ENST00000489318 ATP2C2O75185 946 aa12.14□□□□□ -0.47
C9orf3-220ENST00000489318 ERBB2P04626 1255 aa12.14□□□□□ -0.47
C9orf3-220ENST00000489318 ALDH2P05091 517 aa12.14□□□□□ -0.47
C9orf3-220ENST00000489318 ACAT1P24752 427 aaKnown RBP12.14□□□□□ -0.47
C9orf3-220ENST00000489318 NOP2P46087 812 aaKnown RBP12.14□□□□□ -0.47
C9orf3-220ENST00000489318 NAP1L1P55209 391 aaKnown RBP12.14□□□□□ -0.47
C9orf3-220ENST00000489318 TAP1Q03518 808 aa12.14□□□□□ -0.47
C9orf3-220ENST00000489318 YWHAHQ04917 246 aaPredicted RBP12.14□□□□□ -0.47
C9orf3-220ENST00000489318 PDE4CQ08493 712 aa12.14□□□□□ -0.47
C9orf3-220ENST00000489318 MRPL58Q14197 206 aaKnown RBP12.14□□□□□ -0.47
C9orf3-220ENST00000489318 ZNF268Q14587 947 aaPredicted RBP12.14□□□□□ -0.47
C9orf3-220ENST00000489318 FUT10Q6P4F1 479 aa12.14□□□□□ -0.47
C9orf3-220ENST00000489318 PSRC1Q6PGN9 363 aaPredicted RBP12.14□□□□□ -0.47
C9orf3-220ENST00000489318 TMEM110Q86TL2 294 aa12.14□□□□□ -0.47
C9orf3-220ENST00000489318 NT5DC3Q86UY8 548 aa12.14□□□□□ -0.47
C9orf3-220ENST00000489318 FAM35AQ86V20 835 aa12.14□□□□□ -0.47
C9orf3-220ENST00000489318 XYLT1Q86Y38 959 aa12.14□□□□□ -0.47
C9orf3-220ENST00000489318 OR10T2Q8NGX3 314 aa12.14□□□□□ -0.47
C9orf3-220ENST00000489318 IPO4Q8TEX9 1081 aaKnown RBP12.14□□□□□ -0.47
C9orf3-220ENST00000489318 MCRS1Q96EZ8 462 aa12.14□□□□□ -0.47
C9orf3-220ENST00000489318 PCED1BQ96HM7 432 aa12.14□□□□□ -0.47
C9orf3-220ENST00000489318 LPIN3Q9BQK8 851 aa12.14□□□□□ -0.47
C9orf3-220ENST00000489318 PARVAQ9NVD7 372 aa12.14□□□□□ -0.47
C9orf3-220ENST00000489318 SNX12Q9UMY4 172 aa12.14□□□□□ -0.47
C9orf3-220ENST00000489318 PLXNA3P51805 1871 aa12.14□□□□□ -0.47
C9orf3-220ENST00000489318 MYBPHLA2RUH7 354 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 ENC1O14682 589 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 ACRP10323 421 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 NPR3P17342 541 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 ADORA2BP29275 332 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 MAN1A1P33908 653 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 SCNN1AP37088 669 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 BCAR1P56945 870 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 HTRA4P83105 476 aaPredicted RBP12.13□□□□□ -0.47
C9orf3-220ENST00000489318 MAPRE1Q15691 268 aaKnown RBP12.13□□□□□ -0.47
C9orf3-220ENST00000489318 CCDC142Q17RM4 750 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 C2CD6Q53TS8 623 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 MDH1BQ5I0G3 518 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 PMF1Q6P1K2 205 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 LLGL2Q6P1M3 1020 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 CLEC20AQ6ZU45 233 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 DAAM2Q86T65 1068 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 TMEM173Q86WV6 379 aaPredicted RBP12.13□□□□□ -0.47
C9orf3-220ENST00000489318 ZDHHC17Q8IUH5 632 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 C7orf61Q8IZ16 206 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 THEM5Q8N1Q8 247 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 UBA3Q8TBC4 463 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 FNIP1Q8TF40 1166 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 BCL7CQ8WUZ0 217 aaPredicted RBP12.13□□□□□ -0.47
C9orf3-220ENST00000489318 KCTD13Q8WZ19 329 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 BADQ92934 168 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 C18orf8Q96DM3 657 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 HES6Q96HZ4 224 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 HSFY1Q96LI6 401 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 HTATIP2Q9BUP3 242 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 DUSP16Q9BY84 665 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 OXCT2Q9BYC2 517 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms