RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 PJA2O43164 708 aa19.2■□□□□ 0.66
POLR2J3-205ENST00000489144 SEPT4O43236 478 aa19.2■□□□□ 0.66
POLR2J3-205ENST00000489144 TACC1O75410 805 aa19.2■□□□□ 0.66
POLR2J3-205ENST00000489144 ASGR1P07306 291 aa19.2■□□□□ 0.66
POLR2J3-205ENST00000489144 KCNA10Q16322 511 aa19.2■□□□□ 0.66
POLR2J3-205ENST00000489144 DUOXA2Q1HG44 320 aa19.2■□□□□ 0.66
POLR2J3-205ENST00000489144 CFAP58Q5T655 872 aa19.2■□□□□ 0.66
POLR2J3-205ENST00000489144 ERICH1Q86X53 443 aa19.2■□□□□ 0.66
POLR2J3-205ENST00000489144 LZICQ8WZA0 190 aa19.2■□□□□ 0.66
POLR2J3-205ENST00000489144 GCOM2Q9BZD3 368 aaPredicted RBP19.2■□□□□ 0.66
POLR2J3-205ENST00000489144 UTP6Q9NYH9 597 aaKnown RBP19.2■□□□□ 0.66
POLR2J3-205ENST00000489144 TRIP11Q15643 1979 aa19.2■□□□□ 0.66
POLR2J3-205ENST00000489144 ITGB3P05106 788 aa19.2■□□□□ 0.66
POLR2J3-205ENST00000489144 H2AFZP0C0S5 128 aa19.2■□□□□ 0.66
POLR2J3-205ENST00000489144 FMO1Q01740 532 aa19.2■□□□□ 0.66
POLR2J3-205ENST00000489144 TRPC3Q13507 836 aa19.2■□□□□ 0.66
POLR2J3-205ENST00000489144 CUL2Q13617 745 aa19.2■□□□□ 0.66
POLR2J3-205ENST00000489144 H2AFVQ71UI9 128 aa19.2■□□□□ 0.66
POLR2J3-205ENST00000489144 CAGE1Q8TC20 777 aa19.2■□□□□ 0.66
POLR2J3-205ENST00000489144 NOX5Q96PH1 765 aa19.2■□□□□ 0.66
POLR2J3-205ENST00000489144 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.2■□□□□ 0.66
POLR2J3-205ENST00000489144 TUBGCP4Q9UGJ1 667 aa19.2■□□□□ 0.66
POLR2J3-205ENST00000489144 NENFQ9UMX5 172 aa19.2■□□□□ 0.66
POLR2J3-205ENST00000489144 CDH8P55286 799 aa19.19■□□□□ 0.66
POLR2J3-205ENST00000489144 MCCD1P59942 119 aaPredicted RBP19.19■□□□□ 0.66
POLR2J3-205ENST00000489144 RNASE9P60153 205 aaKnown RBP19.19■□□□□ 0.66
POLR2J3-205ENST00000489144 MMGT1Q8N4V1 131 aa19.19■□□□□ 0.66
POLR2J3-205ENST00000489144 C1orf127Q8N9H9 656 aa19.19■□□□□ 0.66
POLR2J3-205ENST00000489144 SIX4Q9UIU6 781 aa19.19■□□□□ 0.66
POLR2J3-205ENST00000489144 LRRC42Q9Y546 428 aa19.19■□□□□ 0.66
POLR2J3-205ENST00000489144 SMIM35A0A1B0GVV1 85 aa19.19■□□□□ 0.66
POLR2J3-205ENST00000489144 GRID2IPA4D2P6 1211 aa19.19■□□□□ 0.66
POLR2J3-205ENST00000489144 CEP104O60308 925 aa19.19■□□□□ 0.66
POLR2J3-205ENST00000489144 FTLP02792 175 aaPredicted RBP19.19■□□□□ 0.66
POLR2J3-205ENST00000489144 DARSP14868 501 aaKnown RBP19.19■□□□□ 0.66
POLR2J3-205ENST00000489144 RFX1P22670 979 aa19.19■□□□□ 0.66
POLR2J3-205ENST00000489144 PDE6CP51160 858 aa19.19■□□□□ 0.66
POLR2J3-205ENST00000489144 GJA9P57773 515 aa19.19■□□□□ 0.66
POLR2J3-205ENST00000489144 SNX17Q15036 470 aa19.19■□□□□ 0.66
POLR2J3-205ENST00000489144 FAM187BQ17R55 369 aa19.19■□□□□ 0.66
POLR2J3-205ENST00000489144 RAET1EQ8TD07 263 aa19.19■□□□□ 0.66
POLR2J3-205ENST00000489144 FAM200BP0CF97 657 aa19.18■□□□□ 0.66
POLR2J3-205ENST00000489144 KBTBD12Q3ZCT8 623 aa19.18■□□□□ 0.66
POLR2J3-205ENST00000489144 TRIM68Q6AZZ1 485 aa19.18■□□□□ 0.66
POLR2J3-205ENST00000489144 ZNF662Q6ZS27 426 aa19.18■□□□□ 0.66
POLR2J3-205ENST00000489144 ZNF410Q86VK4 478 aa19.18■□□□□ 0.66
POLR2J3-205ENST00000489144 SESTD1Q86VW0 696 aa19.18■□□□□ 0.66
POLR2J3-205ENST00000489144 IFNLR1Q8IU57 520 aaPredicted RBP19.18■□□□□ 0.66
POLR2J3-205ENST00000489144 HINFPQ9BQA5 517 aa19.18■□□□□ 0.66
POLR2J3-205ENST00000489144 CORO1BQ9BR76 489 aa19.18■□□□□ 0.66
POLR2J3-205ENST00000489144 RNF39Q9H2S5 420 aa19.18■□□□□ 0.66
POLR2J3-205ENST00000489144 SRRDQ9UH36 339 aa19.18■□□□□ 0.66
POLR2J3-205ENST00000489144 ADAMTS4O75173 837 aa19.18■□□□□ 0.66
POLR2J3-205ENST00000489144 ACO1P21399 889 aaKnown RBP19.18■□□□□ 0.66
POLR2J3-205ENST00000489144 MRPS25P82663 173 aaKnown RBP19.18■□□□□ 0.66
POLR2J3-205ENST00000489144 ZNF699Q32M78 642 aa19.18■□□□□ 0.66
POLR2J3-205ENST00000489144 CCDC92Q53HC0 331 aaPredicted RBP19.18■□□□□ 0.66
POLR2J3-205ENST00000489144 HDAC7Q8WUI4 952 aa19.18■□□□□ 0.66
POLR2J3-205ENST00000489144 CPA5Q8WXQ8 436 aa19.18■□□□□ 0.66
POLR2J3-205ENST00000489144 BRD8Q9H0E9 1235 aa19.18■□□□□ 0.66
POLR2J3-205ENST00000489144 TNNC2P02585 160 aa19.17■□□□□ 0.66
POLR2J3-205ENST00000489144 MCF2P10911 925 aa19.17■□□□□ 0.66
POLR2J3-205ENST00000489144 SP100P23497 879 aaPredicted RBP19.17■□□□□ 0.66
POLR2J3-205ENST00000489144 GCNT1Q02742 428 aa19.17■□□□□ 0.66
POLR2J3-205ENST00000489144 PAK2Q13177 524 aa19.17■□□□□ 0.66
POLR2J3-205ENST00000489144 CMPK2Q5EBM0 449 aa19.17■□□□□ 0.66
POLR2J3-205ENST00000489144 ANKRD36BP1Q96IX9 119 aa19.17■□□□□ 0.66
POLR2J3-205ENST00000489144 MS4A14Q96JA4 679 aa19.17■□□□□ 0.66
POLR2J3-205ENST00000489144 BTBD6Q96KE9 485 aa19.17■□□□□ 0.66
POLR2J3-205ENST00000489144 ADPGKQ9BRR6 497 aa19.17■□□□□ 0.66
POLR2J3-205ENST00000489144 MTG1Q9BT17 334 aaPredicted RBP19.17■□□□□ 0.66
POLR2J3-205ENST00000489144 IMPG2Q9BZV3 1241 aa19.17■□□□□ 0.66
POLR2J3-205ENST00000489144 LUC7LQ9NQ29 371 aaKnown RBP19.17■□□□□ 0.66
POLR2J3-205ENST00000489144 DMGDHQ9UI17 866 aaKnown RBP19.17■□□□□ 0.66
POLR2J3-205ENST00000489144 TMEM110-MUSTN1A8MSY1 372 aa19.17■□□□□ 0.66
POLR2J3-205ENST00000489144 PPEF2O14830 753 aa19.17■□□□□ 0.66
POLR2J3-205ENST00000489144 TMCC1O94876 653 aa19.17■□□□□ 0.66
POLR2J3-205ENST00000489144 ASS1P00966 412 aaKnown RBP19.17■□□□□ 0.66
POLR2J3-205ENST00000489144 POU5F1BQ06416 359 aa19.17■□□□□ 0.66
POLR2J3-205ENST00000489144 RNF220Q5VTB9 566 aa19.17■□□□□ 0.66
POLR2J3-205ENST00000489144 CPNE8Q86YQ8 564 aa19.17■□□□□ 0.66
POLR2J3-205ENST00000489144 DDX1Q92499 740 aaKnown RBP19.17■□□□□ 0.66
POLR2J3-205ENST00000489144 C18orf25Q96B23 403 aaPredicted RBP19.17■□□□□ 0.66
POLR2J3-205ENST00000489144 ZMAT2Q96NC0 199 aaKnown RBP19.17■□□□□ 0.66
POLR2J3-205ENST00000489144 ACAP3Q96P50 834 aa19.17■□□□□ 0.66
POLR2J3-205ENST00000489144 KATNAL1Q9BW62 490 aa19.17■□□□□ 0.66
POLR2J3-205ENST00000489144 COG5Q9UP83 839 aa19.17■□□□□ 0.66
POLR2J3-205ENST00000489144 Q9Y3F1 56 aa19.17■□□□□ 0.66
POLR2J3-205ENST00000489144 PDE2AO00408 941 aaPredicted RBP19.16■□□□□ 0.66
POLR2J3-205ENST00000489144 POLR2BP30876 1174 aaKnown RBP19.16■□□□□ 0.66
POLR2J3-205ENST00000489144 C2orf54Q08AI8 447 aa19.16■□□□□ 0.66
POLR2J3-205ENST00000489144 NFX1Q12986 1120 aaKnown RBP19.16■□□□□ 0.66
POLR2J3-205ENST00000489144 BTG3Q14201 252 aaPredicted RBP19.16■□□□□ 0.66
POLR2J3-205ENST00000489144 WDR72Q3MJ13 1102 aa19.16■□□□□ 0.66
POLR2J3-205ENST00000489144 TMEM154Q6P9G4 183 aa19.16■□□□□ 0.66
POLR2J3-205ENST00000489144 ZBTB8BQ8NAP8 495 aaPredicted RBP19.16■□□□□ 0.66
POLR2J3-205ENST00000489144 RBBP8NLQ8NC74 664 aaPredicted RBP19.16■□□□□ 0.66
POLR2J3-205ENST00000489144 SLC35G2Q8TBE7 412 aa19.16■□□□□ 0.66
POLR2J3-205ENST00000489144 KIF12Q96FN5 646 aa19.16■□□□□ 0.66
POLR2J3-205ENST00000489144 XYLT2Q9H1B5 865 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms