RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 TXNDC8Q6A555 127 aa15□□□□□ -0.01
VTI1A-206ENST00000489142 SCARA5Q6ZMJ2 495 aa15□□□□□ -0.01
VTI1A-206ENST00000489142 MFSD6LQ8IWD5 586 aa15□□□□□ -0.01
VTI1A-206ENST00000489142 MAB21L3Q8N8X9 362 aa15□□□□□ -0.01
VTI1A-206ENST00000489142 OR6B3Q8NGW1 331 aa15□□□□□ -0.01
VTI1A-206ENST00000489142 GOLGA5Q8TBA6 731 aa15□□□□□ -0.01
VTI1A-206ENST00000489142 DEPDC1BQ8WUY9 529 aa15□□□□□ -0.01
VTI1A-206ENST00000489142 DNASE1L2Q92874 299 aa15□□□□□ -0.01
VTI1A-206ENST00000489142 IRF7Q92985 503 aa15□□□□□ -0.01
VTI1A-206ENST00000489142 SLC46A2Q9BY10 475 aa15□□□□□ -0.01
VTI1A-206ENST00000489142 XYLT2Q9H1B5 865 aa15□□□□□ -0.01
VTI1A-206ENST00000489142 IRF2BPLQ9H1B7 796 aa15□□□□□ -0.01
VTI1A-206ENST00000489142 DPEP3Q9H4B8 488 aa15□□□□□ -0.01
VTI1A-206ENST00000489142 TASP1Q9H6P5 420 aa15□□□□□ -0.01
VTI1A-206ENST00000489142 PIAS3Q9Y6X2 628 aa15□□□□□ -0.01
VTI1A-206ENST00000489142 DPYSL4O14531 572 aa14.99□□□□□ -0.01
VTI1A-206ENST00000489142 GFRA3O60609 400 aa14.99□□□□□ -0.01
VTI1A-206ENST00000489142 F11P03951 625 aa14.99□□□□□ -0.01
VTI1A-206ENST00000489142 MYL1P05976 194 aa14.99□□□□□ -0.01
VTI1A-206ENST00000489142 BDNFP23560 247 aa14.99□□□□□ -0.01
VTI1A-206ENST00000489142 FAM171BQ6P995 826 aa14.99□□□□□ -0.01
VTI1A-206ENST00000489142 DPH6Q7L8W6 267 aa14.99□□□□□ -0.01
VTI1A-206ENST00000489142 SMYD4Q8IYR2 804 aaPredicted RBP14.99□□□□□ -0.01
VTI1A-206ENST00000489142 SPATA18Q8TC71 538 aa14.99□□□□□ -0.01
VTI1A-206ENST00000489142 PARD3BQ8TEW8 1205 aa14.99□□□□□ -0.01
VTI1A-206ENST00000489142 SNX25Q9H3E2 840 aa14.99□□□□□ -0.01
VTI1A-206ENST00000489142 SMYD3Q9H7B4 428 aa14.99□□□□□ -0.01
VTI1A-206ENST00000489142 ABCB6Q9NP58 842 aa14.99□□□□□ -0.01
VTI1A-206ENST00000489142 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.99□□□□□ -0.01
VTI1A-206ENST00000489142 SPATA6Q9NWH7 488 aaPredicted RBP14.99□□□□□ -0.01
VTI1A-206ENST00000489142 MAGEC2Q9UBF1 373 aaPredicted RBP14.99□□□□□ -0.01
VTI1A-206ENST00000489142 CDH9Q9ULB4 789 aa14.99□□□□□ -0.01
VTI1A-206ENST00000489142 CCL26Q9Y258 94 aa14.99□□□□□ -0.01
VTI1A-206ENST00000489142 ZFHX2Q9C0A1 2572 aaPredicted RBP14.99□□□□□ -0.01
VTI1A-206ENST00000489142 ARNTLO00327 626 aa14.98□□□□□ -0.01
VTI1A-206ENST00000489142 PDXKO00764 312 aa14.98□□□□□ -0.01
VTI1A-206ENST00000489142 TADA3O75528 432 aa14.98□□□□□ -0.01
VTI1A-206ENST00000489142 RHOBTB3O94955 611 aa14.98□□□□□ -0.01
VTI1A-206ENST00000489142 VNN1O95497 513 aa14.98□□□□□ -0.01
VTI1A-206ENST00000489142 CSH1P0DML2 217 aa14.98□□□□□ -0.01
VTI1A-206ENST00000489142 CSH2P0DML3 217 aa14.98□□□□□ -0.01
VTI1A-206ENST00000489142 GNL1P36915 607 aaPredicted RBP14.98□□□□□ -0.01
VTI1A-206ENST00000489142 NBL1P41271 181 aa14.98□□□□□ -0.01
VTI1A-206ENST00000489142 CDH8P55286 799 aa14.98□□□□□ -0.01
VTI1A-206ENST00000489142 RPL10AP62906 217 aaKnown RBP14.98□□□□□ -0.01
VTI1A-206ENST00000489142 TNK2Q07912 1038 aa14.98□□□□□ -0.01
VTI1A-206ENST00000489142 PNOCQ13519 176 aa14.98□□□□□ -0.01
VTI1A-206ENST00000489142 ZNF699Q32M78 642 aa14.98□□□□□ -0.01
VTI1A-206ENST00000489142 CFAP221Q4G0U5 840 aa14.98□□□□□ -0.01
VTI1A-206ENST00000489142 ZNF852Q6ZMS4 543 aa14.98□□□□□ -0.01
VTI1A-206ENST00000489142 ASCL5Q7RTU5 278 aa14.98□□□□□ -0.01
VTI1A-206ENST00000489142 C1orf210Q8IVY1 113 aa14.98□□□□□ -0.01
VTI1A-206ENST00000489142 TTC16Q8NEE8 873 aa14.98□□□□□ -0.01
VTI1A-206ENST00000489142 ERCC4Q92889 916 aaPredicted RBP14.98□□□□□ -0.01
VTI1A-206ENST00000489142 CCDC47Q96A33 483 aaKnown RBP14.98□□□□□ -0.01
VTI1A-206ENST00000489142 PCED1BQ96HM7 432 aa14.98□□□□□ -0.01
VTI1A-206ENST00000489142 BCO2Q9BYV7 579 aa14.98□□□□□ -0.01
VTI1A-206ENST00000489142 TRPC7Q9HCX4 862 aa14.98□□□□□ -0.01
VTI1A-206ENST00000489142 GTSE1Q9NYZ3 720 aa14.98□□□□□ -0.01
VTI1A-206ENST00000489142 R4GN57 208 aa14.98□□□□□ -0.01
VTI1A-206ENST00000489142 HELZP42694 1942 aaKnown RBP14.98□□□□□ -0.01
VTI1A-206ENST00000489142 F5P12259 2224 aa14.97□□□□□ -0.01
VTI1A-206ENST00000489142 CALUO43852 315 aaPredicted RBP14.97□□□□□ -0.01
VTI1A-206ENST00000489142 NOL4O94818 638 aa14.97□□□□□ -0.01
VTI1A-206ENST00000489142 C4BPAP04003 597 aaKnown RBP14.97□□□□□ -0.01
VTI1A-206ENST00000489142 TRIM49P0CI25 452 aa14.97□□□□□ -0.01
VTI1A-206ENST00000489142 TRIM49CP0CI26 452 aa14.97□□□□□ -0.01
VTI1A-206ENST00000489142 CCNE1P24864 410 aa14.97□□□□□ -0.01
VTI1A-206ENST00000489142 GRIK1P39086 918 aa14.97□□□□□ -0.01
VTI1A-206ENST00000489142 CACNA2D1P54289 1103 aa14.97□□□□□ -0.01
VTI1A-206ENST00000489142 FCHO2Q0JRZ9 810 aa14.97□□□□□ -0.01
VTI1A-206ENST00000489142 ORC1Q13415 861 aa14.97□□□□□ -0.01
VTI1A-206ENST00000489142 NCOA4Q13772 614 aa14.97□□□□□ -0.01
VTI1A-206ENST00000489142 C1orf220Q5T0J3 134 aa14.97□□□□□ -0.01
VTI1A-206ENST00000489142 C4orf50Q6ZRC1 276 aa14.97□□□□□ -0.01
VTI1A-206ENST00000489142 SLC9A9Q8IVB4 645 aa14.97□□□□□ -0.01
VTI1A-206ENST00000489142 MAML2Q8IZL2 1156 aaPredicted RBP14.97□□□□□ -0.01
VTI1A-206ENST00000489142 CMTM8Q8IZV2 173 aa14.97□□□□□ -0.01
VTI1A-206ENST00000489142 RIN3Q8TB24 985 aa14.97□□□□□ -0.01
VTI1A-206ENST00000489142 CSGALNACT1Q8TDX6 532 aa14.97□□□□□ -0.01
VTI1A-206ENST00000489142 FAM3CQ92520 227 aa14.97□□□□□ -0.01
VTI1A-206ENST00000489142 SYAP1Q96A49 352 aaPredicted RBP14.97□□□□□ -0.01
VTI1A-206ENST00000489142 E2F7Q96AV8 911 aa14.97□□□□□ -0.01
VTI1A-206ENST00000489142 FUBP3Q96I24 572 aaKnown RBP eCLIP14.97□□□□□ -0.01
VTI1A-206ENST00000489142 SDCBP2Q9H190 292 aa14.97□□□□□ -0.01
VTI1A-206ENST00000489142 FANCMQ8IYD8 2048 aa14.97□□□□□ -0.01
VTI1A-206ENST00000489142 MYH10P35580 1976 aa14.96□□□□□ -0.01
VTI1A-206ENST00000489142 A8MXQ7 604 aa14.96□□□□□ -0.01
VTI1A-206ENST00000489142 CLDN5O00501 218 aa14.96□□□□□ -0.01
VTI1A-206ENST00000489142 CHADO15335 359 aa14.96□□□□□ -0.01
VTI1A-206ENST00000489142 TACC1O75410 805 aa14.96□□□□□ -0.01
VTI1A-206ENST00000489142 SP9P0CG40 484 aa14.96□□□□□ -0.01
VTI1A-206ENST00000489142 NR2F2P24468 414 aa14.96□□□□□ -0.01
VTI1A-206ENST00000489142 AVPR1AP37288 418 aa14.96□□□□□ -0.01
VTI1A-206ENST00000489142 KPNA1P52294 538 aaPredicted RBP14.96□□□□□ -0.01
VTI1A-206ENST00000489142 USP46P62068 366 aa14.96□□□□□ -0.01
VTI1A-206ENST00000489142 CLDN10P78369 228 aa14.96□□□□□ -0.01
VTI1A-206ENST00000489142 FZD5Q13467 585 aa14.96□□□□□ -0.01
VTI1A-206ENST00000489142 SPOPLQ6IQ16 392 aa14.96□□□□□ -0.01
VTI1A-206ENST00000489142 FMR1NBQ8N0W7 255 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms