RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 GLULP15104 373 aa26.72■■□□□ 1.87
HMGN1-217ENST00000489072 CD72P21854 359 aa26.72■■□□□ 1.87
HMGN1-217ENST00000489072 GDI1P31150 447 aa26.72■■□□□ 1.87
HMGN1-217ENST00000489072 NLRP12P59046 1061 aa26.72■■□□□ 1.87
HMGN1-217ENST00000489072 RPL10AP62906 217 aaKnown RBP26.72■■□□□ 1.87
HMGN1-217ENST00000489072 NFIL3Q16649 462 aa26.72■■□□□ 1.87
HMGN1-217ENST00000489072 SMYD4Q8IYR2 804 aaPredicted RBP26.72■■□□□ 1.87
HMGN1-217ENST00000489072 TMC2Q8TDI7 906 aa26.72■■□□□ 1.87
HMGN1-217ENST00000489072 SYAP1Q96A49 352 aaPredicted RBP26.72■■□□□ 1.87
HMGN1-217ENST00000489072 LRRC3BQ96PB8 259 aa26.72■■□□□ 1.87
HMGN1-217ENST00000489072 SNX25Q9H3E2 840 aa26.72■■□□□ 1.87
HMGN1-217ENST00000489072 TASP1Q9H6P5 420 aa26.72■■□□□ 1.87
HMGN1-217ENST00000489072 VRTNQ9H8Y1 702 aa26.72■■□□□ 1.87
HMGN1-217ENST00000489072 NXF1Q9UBU9 619 aaKnown RBP26.72■■□□□ 1.87
HMGN1-217ENST00000489072 MTF2Q9Y483 593 aaPredicted RBP26.72■■□□□ 1.87
HMGN1-217ENST00000489072 PRAMEF12O95522 483 aa26.71■■□□□ 1.87
HMGN1-217ENST00000489072 FAM163BP0C2L3 166 aa26.71■■□□□ 1.87
HMGN1-217ENST00000489072 CSH1P0DML2 217 aa26.71■■□□□ 1.87
HMGN1-217ENST00000489072 CSH2P0DML3 217 aa26.71■■□□□ 1.87
HMGN1-217ENST00000489072 NR2F2P24468 414 aa26.71■■□□□ 1.87
HMGN1-217ENST00000489072 GNL1P36915 607 aaPredicted RBP26.71■■□□□ 1.87
HMGN1-217ENST00000489072 MAGEA11P43364 429 aa26.71■■□□□ 1.87
HMGN1-217ENST00000489072 NCOA4Q13772 614 aa26.71■■□□□ 1.87
HMGN1-217ENST00000489072 ZCWPW2Q504Y3 356 aa26.71■■□□□ 1.87
HMGN1-217ENST00000489072 TPRG1Q6ZUI0 275 aa26.71■■□□□ 1.87
HMGN1-217ENST00000489072 ALYREFQ86V81 257 aaKnown RBP26.71■■□□□ 1.87
HMGN1-217ENST00000489072 SCN4BQ8IWT1 228 aa26.71■■□□□ 1.87
HMGN1-217ENST00000489072 OR6B3Q8NGW1 331 aa26.71■■□□□ 1.87
HMGN1-217ENST00000489072 ATOH1Q92858 354 aaPredicted RBP26.71■■□□□ 1.87
HMGN1-217ENST00000489072 E2F7Q96AV8 911 aa26.71■■□□□ 1.87
HMGN1-217ENST00000489072 GCNAQ96QF7 691 aa26.71■■□□□ 1.87
HMGN1-217ENST00000489072 SLC46A2Q9BY10 475 aa26.71■■□□□ 1.87
HMGN1-217ENST00000489072 SMYD3Q9H7B4 428 aa26.71■■□□□ 1.87
HMGN1-217ENST00000489072 MAGED2Q9UNF1 606 aaPredicted RBP26.71■■□□□ 1.87
HMGN1-217ENST00000489072 FRMD4BQ9Y2L6 1034 aa26.71■■□□□ 1.87
HMGN1-217ENST00000489072 MYO15AQ9UKN7 3530 aa26.7■■□□□ 1.87
HMGN1-217ENST00000489072 ZFHX2Q9C0A1 2572 aaPredicted RBP26.7■■□□□ 1.87
HMGN1-217ENST00000489072 SLC38A8A6NNN8 435 aa26.7■■□□□ 1.86
HMGN1-217ENST00000489072 AKAP3O75969 853 aa26.7■■□□□ 1.86
HMGN1-217ENST00000489072 NOL4O94818 638 aa26.7■■□□□ 1.86
HMGN1-217ENST00000489072 FAM160A1Q05DH4 1040 aa26.7■■□□□ 1.86
HMGN1-217ENST00000489072 ZNF699Q32M78 642 aa26.7■■□□□ 1.86
HMGN1-217ENST00000489072 ZACNQ401N2 412 aa26.7■■□□□ 1.86
HMGN1-217ENST00000489072 C4orf50Q6ZRC1 276 aa26.7■■□□□ 1.86
HMGN1-217ENST00000489072 IRF7Q92985 503 aa26.7■■□□□ 1.86
HMGN1-217ENST00000489072 CCDC34Q96HJ3 373 aa26.7■■□□□ 1.86
HMGN1-217ENST00000489072 IRF2BPLQ9H1B7 796 aa26.7■■□□□ 1.86
HMGN1-217ENST00000489072 DPEP3Q9H4B8 488 aa26.7■■□□□ 1.86
HMGN1-217ENST00000489072 MAGEC2Q9UBF1 373 aaPredicted RBP26.7■■□□□ 1.86
HMGN1-217ENST00000489072 ANAPC1Q9H1A4 1944 aa26.7■■□□□ 1.86
HMGN1-217ENST00000489072 ARNTLO00327 626 aa26.69■■□□□ 1.86
HMGN1-217ENST00000489072 MAPK13O15264 365 aa26.69■■□□□ 1.86
HMGN1-217ENST00000489072 TADA3O75528 432 aa26.69■■□□□ 1.86
HMGN1-217ENST00000489072 BDNFP23560 247 aa26.69■■□□□ 1.86
HMGN1-217ENST00000489072 WEE1P30291 646 aa26.69■■□□□ 1.86
HMGN1-217ENST00000489072 MRE11P49959 708 aa26.69■■□□□ 1.86
HMGN1-217ENST00000489072 FCHO2Q0JRZ9 810 aa26.69■■□□□ 1.86
HMGN1-217ENST00000489072 UBXN2BQ14CS0 331 aa26.69■■□□□ 1.86
HMGN1-217ENST00000489072 MAPRE1Q15691 268 aaKnown RBP26.69■■□□□ 1.86
HMGN1-217ENST00000489072 MDH1BQ5I0G3 518 aa26.69■■□□□ 1.86
HMGN1-217ENST00000489072 MYCBPAPQ8TBZ2 947 aa26.69■■□□□ 1.86
HMGN1-217ENST00000489072 ERCC4Q92889 916 aaPredicted RBP26.69■■□□□ 1.86
HMGN1-217ENST00000489072 PCED1BQ96HM7 432 aa26.69■■□□□ 1.86
HMGN1-217ENST00000489072 SMG9Q9H0W8 520 aaKnown RBP26.69■■□□□ 1.86
HMGN1-217ENST00000489072 LTB4R2Q9NPC1 389 aa26.69■■□□□ 1.86
HMGN1-217ENST00000489072 TRPV5Q9NQA5 729 aa26.69■■□□□ 1.86
HMGN1-217ENST00000489072 USP34Q70CQ2 3546 aa26.69■■□□□ 1.86
HMGN1-217ENST00000489072 KIF26AQ9ULI4 1882 aaPredicted RBP26.68■■□□□ 1.86
HMGN1-217ENST00000489072 ZNF263O14978 683 aa26.68■■□□□ 1.86
HMGN1-217ENST00000489072 CDH8P55286 799 aa26.68■■□□□ 1.86
HMGN1-217ENST00000489072 CYP27A1Q02318 531 aa26.68■■□□□ 1.86
HMGN1-217ENST00000489072 ANGPT1Q15389 498 aa26.68■■□□□ 1.86
HMGN1-217ENST00000489072 SV2AQ7L0J3 742 aa26.68■■□□□ 1.86
HMGN1-217ENST00000489072 TRMT2BQ96GJ1 504 aaKnown RBP26.68■■□□□ 1.86
HMGN1-217ENST00000489072 MYRFLQ96LU7 910 aa26.68■■□□□ 1.86
HMGN1-217ENST00000489072 SDCBP2Q9H190 292 aa26.68■■□□□ 1.86
HMGN1-217ENST00000489072 DMDP11532 3685 aa26.68■■□□□ 1.86
HMGN1-217ENST00000489072 FAM170BA6NMN3 283 aa26.67■■□□□ 1.86
HMGN1-217ENST00000489072 IKBKBO14920 756 aa26.67■■□□□ 1.86
HMGN1-217ENST00000489072 PTPN1P18031 435 aaKnown RBP26.67■■□□□ 1.86
HMGN1-217ENST00000489072 RAP1GAPP47736 663 aa26.67■■□□□ 1.86
HMGN1-217ENST00000489072 VAMP7P51809 220 aa26.67■■□□□ 1.86
HMGN1-217ENST00000489072 ZNF667Q5HYK9 610 aa26.67■■□□□ 1.86
HMGN1-217ENST00000489072 VSTM1Q6UX27 236 aa26.67■■□□□ 1.86
HMGN1-217ENST00000489072 SCARA5Q6ZMJ2 495 aa26.67■■□□□ 1.86
HMGN1-217ENST00000489072 CMTM8Q8IZV2 173 aa26.67■■□□□ 1.86
HMGN1-217ENST00000489072 OBP2AQ9NY56 170 aa26.67■■□□□ 1.86
HMGN1-217ENST00000489072 A8MXQ7 604 aa26.66■■□□□ 1.86
HMGN1-217ENST00000489072 DPYSL4O14531 572 aa26.66■■□□□ 1.86
HMGN1-217ENST00000489072 CHADO15335 359 aa26.66■■□□□ 1.86
HMGN1-217ENST00000489072 TRIM49P0CI25 452 aa26.66■■□□□ 1.86
HMGN1-217ENST00000489072 TRIM49CP0CI26 452 aa26.66■■□□□ 1.86
HMGN1-217ENST00000489072 TARSP26639 723 aaKnown RBP26.66■■□□□ 1.86
HMGN1-217ENST00000489072 ADAM9Q13443 819 aa26.66■■□□□ 1.86
HMGN1-217ENST00000489072 TXNDC8Q6A555 127 aa26.66■■□□□ 1.86
HMGN1-217ENST00000489072 YAF2Q8IY57 180 aa26.66■■□□□ 1.86
HMGN1-217ENST00000489072 FAM186BQ8IYM0 893 aa26.66■■□□□ 1.86
HMGN1-217ENST00000489072 MAB21L3Q8N8X9 362 aa26.66■■□□□ 1.86
HMGN1-217ENST00000489072 SPATA20Q8TB22 786 aa26.66■■□□□ 1.86
HMGN1-217ENST00000489072 OSBPL6Q9BZF3 934 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms