RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 WARSP23381 471 aaKnown RBP24.63■■□□□ 1.53
COL9A3-213ENST00000489045 LMO2P25791 158 aa24.63■■□□□ 1.53
COL9A3-213ENST00000489045 SYKP43405 635 aa24.63■■□□□ 1.53
COL9A3-213ENST00000489045 PSMD2Q13200 908 aa24.63■■□□□ 1.53
COL9A3-213ENST00000489045 FAM171BQ6P995 826 aa24.63■■□□□ 1.53
COL9A3-213ENST00000489045 ZNF687Q8N1G0 1237 aa24.63■■□□□ 1.53
COL9A3-213ENST00000489045 FAM3CQ92520 227 aa24.63■■□□□ 1.53
COL9A3-213ENST00000489045 ZNF516Q92618 1163 aa24.63■■□□□ 1.53
COL9A3-213ENST00000489045 FUBP3Q96I24 572 aaKnown RBP eCLIP24.63■■□□□ 1.53
COL9A3-213ENST00000489045 ZFYVE19Q96K21 471 aa24.63■■□□□ 1.53
COL9A3-213ENST00000489045 SMG9Q9H0W8 520 aaKnown RBP24.63■■□□□ 1.53
COL9A3-213ENST00000489045 CDH9Q9ULB4 789 aa24.63■■□□□ 1.53
COL9A3-213ENST00000489045 WDR87Q6ZQQ6 2873 aa24.62■■□□□ 1.53
COL9A3-213ENST00000489045 CASP4P49662 377 aa24.62■■□□□ 1.53
COL9A3-213ENST00000489045 NDUFA8P51970 172 aa24.62■■□□□ 1.53
COL9A3-213ENST00000489045 ARHGAP29Q52LW3 1261 aa24.62■■□□□ 1.53
COL9A3-213ENST00000489045 SCN4BQ8IWT1 228 aa24.62■■□□□ 1.53
COL9A3-213ENST00000489045 CMTM8Q8IZV2 173 aa24.62■■□□□ 1.53
COL9A3-213ENST00000489045 PLEKHO2Q8TD55 490 aa24.62■■□□□ 1.53
COL9A3-213ENST00000489045 BPIFB1Q8TDL5 484 aa24.62■■□□□ 1.53
COL9A3-213ENST00000489045 ZMYM5Q9UJ78 669 aa24.62■■□□□ 1.53
COL9A3-213ENST00000489045 ATP6V1DQ9Y5K8 247 aa24.62■■□□□ 1.53
COL9A3-213ENST00000489045 FAM237AA0A1B0GTK4 181 aa24.61■■□□□ 1.53
COL9A3-213ENST00000489045 SLC38A8A6NNN8 435 aa24.61■■□□□ 1.53
COL9A3-213ENST00000489045 NOL4O94818 638 aa24.61■■□□□ 1.53
COL9A3-213ENST00000489045 MYL1P05976 194 aa24.61■■□□□ 1.53
COL9A3-213ENST00000489045 PDGFRBP09619 1106 aa24.61■■□□□ 1.53
COL9A3-213ENST00000489045 KPNA1P52294 538 aaPredicted RBP24.61■■□□□ 1.53
COL9A3-213ENST00000489045 TRPC3Q13507 836 aa24.61■■□□□ 1.53
COL9A3-213ENST00000489045 ZC3H14Q6PJT7 736 aaKnown RBP24.61■■□□□ 1.53
COL9A3-213ENST00000489045 C4orf50Q6ZRC1 276 aa24.61■■□□□ 1.53
COL9A3-213ENST00000489045 MAB21L3Q8N8X9 362 aa24.61■■□□□ 1.53
COL9A3-213ENST00000489045 MYLPFQ96A32 169 aa24.61■■□□□ 1.53
COL9A3-213ENST00000489045 TRMT2BQ96GJ1 504 aaKnown RBP24.61■■□□□ 1.53
COL9A3-213ENST00000489045 MRPL45Q9BRJ2 306 aaKnown RBP24.61■■□□□ 1.53
COL9A3-213ENST00000489045 KCTD10Q9H3F6 313 aa24.61■■□□□ 1.53
COL9A3-213ENST00000489045 CRTAC1Q9NQ79 661 aa24.61■■□□□ 1.53
COL9A3-213ENST00000489045 FBXO4Q9UKT5 387 aa24.61■■□□□ 1.53
COL9A3-213ENST00000489045 PTPRZ1P23471 2315 aaPredicted RBP24.61■■□□□ 1.53
COL9A3-213ENST00000489045 CFAP54Q96N23 3096 aa24.6■■□□□ 1.53
COL9A3-213ENST00000489045 TADA3O75528 432 aa24.6■■□□□ 1.53
COL9A3-213ENST00000489045 RPN1P04843 607 aaKnown RBP24.6■■□□□ 1.53
COL9A3-213ENST00000489045 PRR29P0C7W0 189 aa24.6■■□□□ 1.53
COL9A3-213ENST00000489045 CCNE1P24864 410 aa24.6■■□□□ 1.53
COL9A3-213ENST00000489045 DDX6P26196 483 aaKnown RBP eCLIP24.6■■□□□ 1.53
COL9A3-213ENST00000489045 AVPR1AP37288 418 aa24.6■■□□□ 1.53
COL9A3-213ENST00000489045 MAGEA11P43364 429 aa24.6■■□□□ 1.53
COL9A3-213ENST00000489045 SOX9P48436 509 aa24.6■■□□□ 1.53
COL9A3-213ENST00000489045 MLLT6P55198 1093 aaPredicted RBP24.6■■□□□ 1.53
COL9A3-213ENST00000489045 TNNC1P63316 161 aa24.6■■□□□ 1.53
COL9A3-213ENST00000489045 WDR72Q3MJ13 1102 aa24.6■■□□□ 1.53
COL9A3-213ENST00000489045 TXNDC8Q6A555 127 aa24.6■■□□□ 1.53
COL9A3-213ENST00000489045 CELF5Q8N6W0 485 aaKnown RBP24.6■■□□□ 1.53
COL9A3-213ENST00000489045 TTC8Q8TAM2 541 aa24.6■■□□□ 1.53
COL9A3-213ENST00000489045 MRPS31Q92665 395 aaKnown RBP24.6■■□□□ 1.53
COL9A3-213ENST00000489045 MSANTD3Q96H12 275 aa24.6■■□□□ 1.53
COL9A3-213ENST00000489045 SCAND2PQ9GZW5 306 aaPredicted RBP24.6■■□□□ 1.53
COL9A3-213ENST00000489045 SNX25Q9H3E2 840 aa24.6■■□□□ 1.53
COL9A3-213ENST00000489045 MAGEC2Q9UBF1 373 aaPredicted RBP24.6■■□□□ 1.53
COL9A3-213ENST00000489045 UXTQ9UBK9 157 aaPredicted RBP24.6■■□□□ 1.53
COL9A3-213ENST00000489045 HELZP42694 1942 aaKnown RBP24.6■■□□□ 1.53
COL9A3-213ENST00000489045 GVINP1Q7Z2Y8 2422 aa24.59■■□□□ 1.53
COL9A3-213ENST00000489045 PHACTR2O75167 634 aa24.59■■□□□ 1.53
COL9A3-213ENST00000489045 TACC1O75410 805 aa24.59■■□□□ 1.53
COL9A3-213ENST00000489045 MYL6P60660 151 aa24.59■■□□□ 1.53
COL9A3-213ENST00000489045 CSTF1Q05048 431 aaKnown RBP24.59■■□□□ 1.53
COL9A3-213ENST00000489045 MAPRE1Q15691 268 aaKnown RBP24.59■■□□□ 1.53
COL9A3-213ENST00000489045 SLC9A9Q8IVB4 645 aa24.59■■□□□ 1.53
COL9A3-213ENST00000489045 FSIP1Q8NA03 581 aa24.59■■□□□ 1.53
COL9A3-213ENST00000489045 PARD3BQ8TEW8 1205 aa24.59■■□□□ 1.53
COL9A3-213ENST00000489045 MYRFLQ96LU7 910 aa24.59■■□□□ 1.53
COL9A3-213ENST00000489045 SEMA4AQ9H3S1 761 aa24.59■■□□□ 1.53
COL9A3-213ENST00000489045 C8orf33Q9H7E9 229 aaPredicted RBP24.59■■□□□ 1.53
COL9A3-213ENST00000489045 DMAC2Q9NW81 257 aa24.59■■□□□ 1.53
COL9A3-213ENST00000489045 GTSE1Q9NYZ3 720 aa24.59■■□□□ 1.53
COL9A3-213ENST00000489045 NME7Q9Y5B8 376 aa24.59■■□□□ 1.53
COL9A3-213ENST00000489045 LRRIQ3A6PVS8 624 aaPredicted RBP24.58■■□□□ 1.53
COL9A3-213ENST00000489045 PDXKO00764 312 aa24.58■■□□□ 1.53
COL9A3-213ENST00000489045 STAU1O95793 577 aaKnown RBP24.58■■□□□ 1.53
COL9A3-213ENST00000489045 GNL1P36915 607 aaPredicted RBP24.58■■□□□ 1.53
COL9A3-213ENST00000489045 PLCB2Q00722 1185 aa24.58■■□□□ 1.53
COL9A3-213ENST00000489045 CYP27A1Q02318 531 aa24.58■■□□□ 1.53
COL9A3-213ENST00000489045 MTAPQ13126 283 aa24.58■■□□□ 1.53
COL9A3-213ENST00000489045 BIRC3Q13489 604 aa24.58■■□□□ 1.53
COL9A3-213ENST00000489045 ZNF528Q3MIS6 628 aa24.58■■□□□ 1.53
COL9A3-213ENST00000489045 TDRD10Q5VZ19 366 aaKnown RBP24.58■■□□□ 1.53
COL9A3-213ENST00000489045 ADSSL1Q8N142 457 aa24.58■■□□□ 1.53
COL9A3-213ENST00000489045 OR6B3Q8NGW1 331 aa24.58■■□□□ 1.53
COL9A3-213ENST00000489045 USP13Q92995 863 aaPredicted RBP24.58■■□□□ 1.53
COL9A3-213ENST00000489045 PCED1BQ96HM7 432 aa24.58■■□□□ 1.53
COL9A3-213ENST00000489045 XYLT2Q9H1B5 865 aa24.58■■□□□ 1.53
COL9A3-213ENST00000489045 CHRDQ9H2X0 955 aa24.58■■□□□ 1.53
COL9A3-213ENST00000489045 GOLPH3LQ9H4A5 285 aa24.58■■□□□ 1.53
COL9A3-213ENST00000489045 LMAN1LQ9HAT1 526 aa24.58■■□□□ 1.53
COL9A3-213ENST00000489045 NXF1Q9UBU9 619 aaKnown RBP24.58■■□□□ 1.53
COL9A3-213ENST00000489045 CCL26Q9Y258 94 aa24.58■■□□□ 1.53
COL9A3-213ENST00000489045 ZNF292O60281 2723 aa24.58■■□□□ 1.53
COL9A3-213ENST00000489045 A0A1W2PQ27 194 aa24.57■■□□□ 1.52
COL9A3-213ENST00000489045 A0A1W2PQ64 194 aa24.57■■□□□ 1.52
COL9A3-213ENST00000489045 A0A1W2PQD8 194 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms