RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 XPO4Q9C0E2 1151 aaKnown RBP3.82□□□□□ -1.8
PRPF4-203ENST00000488937 GREM2Q9H772 168 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 SEC61A2Q9H9S3 476 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 LMBRD1Q9NUN5 540 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 PNPOQ9NVS9 261 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 HSPBP1Q9NZL4 362 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 DSEQ9UL01 958 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 C19orf53Q9UNZ5 99 aaPredicted RBP3.82□□□□□ -1.8
PRPF4-203ENST00000488937 SCAF8Q9UPN6 1271 aaKnown RBP3.82□□□□□ -1.8
PRPF4-203ENST00000488937 ZNF711Q9Y462 761 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 TELO2Q9Y4R8 837 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 UBA6A0AVT1 1052 aaPredicted RBP3.81□□□□□ -1.8
PRPF4-203ENST00000488937 TRIM64A6NGJ6 449 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 TRIM64BA6NI03 449 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 FAM90A27PA6NNH2 459 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 H3BUI4 141 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 KRIT1O00522 736 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 PODXLO00592 558 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 FOXP2O15409 715 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 HTATSF1O43719 755 aaKnown RBP3.81□□□□□ -1.8
PRPF4-203ENST00000488937 NARSO43776 548 aaKnown RBP3.81□□□□□ -1.8
PRPF4-203ENST00000488937 HSPA4LO95757 839 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 STARD3NLO95772 234 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 SCGB1D1O95968 90 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 PRLP01236 227 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 MT-ND5P03915 603 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 TK1P04183 234 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 NR2F1P10589 423 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 MYL4P12829 197 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 IDEP14735 1019 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 JUPP14923 745 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 RPS16P62249 146 aaKnown RBP3.81□□□□□ -1.8
PRPF4-203ENST00000488937 NEXNQ0ZGT2 675 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 DLGAP5Q15398 846 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 LSM12Q3MHD2 195 aaKnown RBP3.81□□□□□ -1.8
PRPF4-203ENST00000488937 CCDC157Q569K6 752 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 C3orf38Q5JPI3 329 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 SNX30Q5VWJ9 437 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 ZNF449Q6P9G9 518 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 UNQ6494/PRO21346Q6UXR6 183 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 TMTC3Q6ZXV5 915 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 KCTD1Q719H9 257 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 STK32CQ86UX6 486 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 HSCBQ8IWL3 235 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 BRSK2Q8IWQ3 736 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 RPAP2Q8IXW5 612 aaPredicted RBP3.81□□□□□ -1.8
PRPF4-203ENST00000488937 TEX11Q8IYF3 940 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 NGEFQ8N5V2 710 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 ARL6IP6Q8N6S5 226 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 VGLL2Q8N8G2 317 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 ARRDC4Q8NCT1 418 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 PIP4K2CQ8TBX8 421 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 DPF2Q92785 391 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 SNX21Q969T3 373 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 SNX22Q96L94 193 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 CD244Q9BZW8 370 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 MLXIPQ9HAP2 919 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 SMURF2Q9HAU4 748 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 TRPV4Q9HBA0 871 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 KCND1Q9NSA2 647 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 DTLQ9NZJ0 730 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 EPS15L1Q9UBC2 864 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 ASH2LQ9UBL3 628 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 HERC5Q9UII4 1024 aaKnown RBP3.81□□□□□ -1.8
PRPF4-203ENST00000488937 TMCC3Q9ULS5 477 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 PCDHB4Q9Y5E5 795 aa3.81□□□□□ -1.8
PRPF4-203ENST00000488937 LMTK3Q96Q04 1460 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 SOS1Q07889 1333 aaPredicted RBP3.8□□□□□ -1.8
PRPF4-203ENST00000488937 MYPNQ86TC9 1320 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 A0A087WZ62 844 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 ST20-MTHFSA0A0A6YYL1 179 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 FAM171A2A8MVW0 826 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 GOLGA6L22H0YM25 854 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 THAP12O43422 761 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 KCNQ3O43525 872 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 B4GALT4O60513 344 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 ATP6V1B1P15313 513 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 PTPN1P18031 435 aaKnown RBP3.8□□□□□ -1.8
PRPF4-203ENST00000488937 MAPK4P31152 587 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 IL13P35225 146 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 GPR15P49685 360 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 FLT3LGP49771 235 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 POLE2P56282 527 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 HERVK_113P62684 666 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 CCT2P78371 535 aaKnown RBP3.8□□□□□ -1.8
PRPF4-203ENST00000488937 CDC42EP1Q00587 391 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 CR1LQ2VPA4 569 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 CCDC178Q5BJE1 867 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 DNAJC21Q5F1R6 531 aaKnown RBP3.8□□□□□ -1.8
PRPF4-203ENST00000488937 TTC38Q5R3I4 469 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 ZNF362Q5T0B9 420 aaPredicted RBP3.8□□□□□ -1.8
PRPF4-203ENST00000488937 ANKRD45Q5TZF3 282 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 EMC10Q5UCC4 262 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 ARL6IP4Q66PJ3 421 aaKnown RBP3.8□□□□□ -1.8
PRPF4-203ENST00000488937 TIGD7Q6NT04 549 aaPredicted RBP3.8□□□□□ -1.8
PRPF4-203ENST00000488937 GALNTL5Q7Z4T8 443 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 PRPF39Q86UA1 669 aaKnown RBP3.8□□□□□ -1.8
PRPF4-203ENST00000488937 MICU3Q86XE3 530 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 CELF5Q8N6W0 485 aaKnown RBP3.8□□□□□ -1.8
PRPF4-203ENST00000488937 OR1N1Q8NGS0 311 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms