RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 SYT15Q9BQS2 421 aa12.78□□□□□ -0.36
CCHCR1-215ENST00000488920 MRPL45Q9BRJ2 306 aaKnown RBP12.78□□□□□ -0.36
CCHCR1-215ENST00000488920 SEMA4AQ9H3S1 761 aa12.78□□□□□ -0.36
CCHCR1-215ENST00000488920 CRTAC1Q9NQ79 661 aa12.78□□□□□ -0.36
CCHCR1-215ENST00000488920 EXOC1Q9NV70 894 aa12.78□□□□□ -0.36
CCHCR1-215ENST00000488920 OBP2AQ9NY56 170 aa12.78□□□□□ -0.36
CCHCR1-215ENST00000488920 GTSE1Q9NYZ3 720 aa12.78□□□□□ -0.36
CCHCR1-215ENST00000488920 CGNQ9P2M7 1197 aaKnown RBP12.78□□□□□ -0.36
CCHCR1-215ENST00000488920 MAGEC2Q9UBF1 373 aaPredicted RBP12.78□□□□□ -0.36
CCHCR1-215ENST00000488920 FBXO4Q9UKT5 387 aa12.78□□□□□ -0.36
CCHCR1-215ENST00000488920 CDH9Q9ULB4 789 aa12.78□□□□□ -0.36
CCHCR1-215ENST00000488920 CCL26Q9Y258 94 aa12.78□□□□□ -0.36
CCHCR1-215ENST00000488920 CFAP54Q96N23 3096 aa12.77□□□□□ -0.36
CCHCR1-215ENST00000488920 TSC2P49815 1807 aa12.77□□□□□ -0.37
CCHCR1-215ENST00000488920 PHACTR2O75167 634 aa12.77□□□□□ -0.37
CCHCR1-215ENST00000488920 NOL4O94818 638 aa12.77□□□□□ -0.37
CCHCR1-215ENST00000488920 WARSP23381 471 aaKnown RBP12.77□□□□□ -0.37
CCHCR1-215ENST00000488920 AVPR1AP37288 418 aa12.77□□□□□ -0.37
CCHCR1-215ENST00000488920 NDUFA8P51970 172 aa12.77□□□□□ -0.37
CCHCR1-215ENST00000488920 MYL6P60660 151 aa12.77□□□□□ -0.37
CCHCR1-215ENST00000488920 CYP27A1Q02318 531 aa12.77□□□□□ -0.37
CCHCR1-215ENST00000488920 PSMD2Q13200 908 aa12.77□□□□□ -0.37
CCHCR1-215ENST00000488920 TRPC3Q13507 836 aa12.77□□□□□ -0.37
CCHCR1-215ENST00000488920 ZNF528Q3MIS6 628 aa12.77□□□□□ -0.37
CCHCR1-215ENST00000488920 WDR72Q3MJ13 1102 aa12.77□□□□□ -0.37
CCHCR1-215ENST00000488920 CFAP221Q4G0U5 840 aa12.77□□□□□ -0.37
CCHCR1-215ENST00000488920 ARHGAP29Q52LW3 1261 aa12.77□□□□□ -0.37
CCHCR1-215ENST00000488920 ZC3H14Q6PJT7 736 aaKnown RBP12.77□□□□□ -0.37
CCHCR1-215ENST00000488920 MON1AQ86VX9 555 aa12.77□□□□□ -0.37
CCHCR1-215ENST00000488920 CELF5Q8N6W0 485 aaKnown RBP12.77□□□□□ -0.37
CCHCR1-215ENST00000488920 GOLGA5Q8TBA6 731 aa12.77□□□□□ -0.37
CCHCR1-215ENST00000488920 PLEKHO2Q8TD55 490 aa12.77□□□□□ -0.37
CCHCR1-215ENST00000488920 MRPS31Q92665 395 aaKnown RBP12.77□□□□□ -0.37
CCHCR1-215ENST00000488920 USP13Q92995 863 aaPredicted RBP12.77□□□□□ -0.37
CCHCR1-215ENST00000488920 MYLPFQ96A32 169 aa12.77□□□□□ -0.37
CCHCR1-215ENST00000488920 FUBP3Q96I24 572 aaKnown RBP eCLIP12.77□□□□□ -0.37
CCHCR1-215ENST00000488920 SNX25Q9H3E2 840 aa12.77□□□□□ -0.37
CCHCR1-215ENST00000488920 C8orf33Q9H7E9 229 aaPredicted RBP12.77□□□□□ -0.37
CCHCR1-215ENST00000488920 GKN1Q9NS71 199 aa12.77□□□□□ -0.37
CCHCR1-215ENST00000488920 THG1LQ9NWX6 298 aaKnown RBP12.77□□□□□ -0.37
CCHCR1-215ENST00000488920 NXF1Q9UBU9 619 aaKnown RBP12.77□□□□□ -0.37
CCHCR1-215ENST00000488920 USP25Q9UHP3 1055 aa12.77□□□□□ -0.37
CCHCR1-215ENST00000488920 HPSEQ9Y251 543 aa12.77□□□□□ -0.37
CCHCR1-215ENST00000488920 SPECC1L-ADORA2AF8WAN1 911 aa12.76□□□□□ -0.37
CCHCR1-215ENST00000488920 CHRNB1P11230 501 aa12.76□□□□□ -0.37
CCHCR1-215ENST00000488920 BDNFP23560 247 aa12.76□□□□□ -0.37
CCHCR1-215ENST00000488920 DDX6P26196 483 aaKnown RBP eCLIP12.76□□□□□ -0.37
CCHCR1-215ENST00000488920 GRIK1P39086 918 aa12.76□□□□□ -0.37
CCHCR1-215ENST00000488920 MAGEA11P43364 429 aa12.76□□□□□ -0.37
CCHCR1-215ENST00000488920 SYKP43405 635 aa12.76□□□□□ -0.37
CCHCR1-215ENST00000488920 MLLT6P55198 1093 aaPredicted RBP12.76□□□□□ -0.37
CCHCR1-215ENST00000488920 TNNC1P63316 161 aa12.76□□□□□ -0.37
CCHCR1-215ENST00000488920 MDH1BQ5I0G3 518 aa12.76□□□□□ -0.37
CCHCR1-215ENST00000488920 TXNDC11Q6PKC3 985 aa12.76□□□□□ -0.37
CCHCR1-215ENST00000488920 C4orf50Q6ZRC1 276 aa12.76□□□□□ -0.37
CCHCR1-215ENST00000488920 OR6B3Q8NGW1 331 aa12.76□□□□□ -0.37
CCHCR1-215ENST00000488920 ATRIPQ8WXE1 791 aa12.76□□□□□ -0.37
CCHCR1-215ENST00000488920 ELMO3Q96BJ8 720 aa12.76□□□□□ -0.37
CCHCR1-215ENST00000488920 MYRFLQ96LU7 910 aa12.76□□□□□ -0.37
CCHCR1-215ENST00000488920 CYP2S1Q96SQ9 504 aa12.76□□□□□ -0.37
CCHCR1-215ENST00000488920 CHRDQ9H2X0 955 aa12.76□□□□□ -0.37
CCHCR1-215ENST00000488920 TRPC7Q9HCX4 862 aa12.76□□□□□ -0.37
CCHCR1-215ENST00000488920 RBM12Q9NTZ6 932 aaKnown RBP12.76□□□□□ -0.37
CCHCR1-215ENST00000488920 TDP1Q9NUW8 608 aa12.76□□□□□ -0.37
CCHCR1-215ENST00000488920 DMAC2Q9NW81 257 aa12.76□□□□□ -0.37
CCHCR1-215ENST00000488920 UXTQ9UBK9 157 aaPredicted RBP12.76□□□□□ -0.37
CCHCR1-215ENST00000488920 ZMYM5Q9UJ78 669 aa12.76□□□□□ -0.37
CCHCR1-215ENST00000488920 NME7Q9Y5B8 376 aa12.76□□□□□ -0.37
CCHCR1-215ENST00000488920 PTPRZ1P23471 2315 aaPredicted RBP12.76□□□□□ -0.37
CCHCR1-215ENST00000488920 KINO60870 393 aaKnown RBP12.75□□□□□ -0.37
CCHCR1-215ENST00000488920 TACC1O75410 805 aa12.75□□□□□ -0.37
CCHCR1-215ENST00000488920 TADA3O75528 432 aa12.75□□□□□ -0.37
CCHCR1-215ENST00000488920 RPN1P04843 607 aaKnown RBP12.75□□□□□ -0.37
CCHCR1-215ENST00000488920 PRR29P0C7W0 189 aa12.75□□□□□ -0.37
CCHCR1-215ENST00000488920 PTPN1P18031 435 aaKnown RBP12.75□□□□□ -0.37
CCHCR1-215ENST00000488920 CTHP32929 405 aa12.75□□□□□ -0.37
CCHCR1-215ENST00000488920 PLCB2Q00722 1185 aa12.75□□□□□ -0.37
CCHCR1-215ENST00000488920 BIRC3Q13489 604 aa12.75□□□□□ -0.37
CCHCR1-215ENST00000488920 MAPRE1Q15691 268 aaKnown RBP12.75□□□□□ -0.37
CCHCR1-215ENST00000488920 ITPRIPL2Q3MIP1 535 aa12.75□□□□□ -0.37
CCHCR1-215ENST00000488920 RALGPS2Q86X27 583 aaPredicted RBP12.75□□□□□ -0.37
CCHCR1-215ENST00000488920 TTC16Q8NEE8 873 aa12.75□□□□□ -0.37
CCHCR1-215ENST00000488920 MYCBPAPQ8TBZ2 947 aa12.75□□□□□ -0.37
CCHCR1-215ENST00000488920 PARD3BQ8TEW8 1205 aa12.75□□□□□ -0.37
CCHCR1-215ENST00000488920 TRMT2BQ96GJ1 504 aaKnown RBP12.75□□□□□ -0.37
CCHCR1-215ENST00000488920 MSANTD3Q96H12 275 aa12.75□□□□□ -0.37
CCHCR1-215ENST00000488920 PCED1BQ96HM7 432 aa12.75□□□□□ -0.37
CCHCR1-215ENST00000488920 SLC22A12Q96S37 553 aa12.75□□□□□ -0.37
CCHCR1-215ENST00000488920 XYLT2Q9H1B5 865 aa12.75□□□□□ -0.37
CCHCR1-215ENST00000488920 KCTD10Q9H3F6 313 aa12.75□□□□□ -0.37
CCHCR1-215ENST00000488920 DPEP3Q9H4B8 488 aa12.75□□□□□ -0.37
CCHCR1-215ENST00000488920 PRMT8Q9NR22 394 aaPredicted RBP12.75□□□□□ -0.37
CCHCR1-215ENST00000488920 ZSCAN32Q9NX65 697 aa12.75□□□□□ -0.37
CCHCR1-215ENST00000488920 FAM237AA0A1B0GTK4 181 aa12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 LRRIQ3A6PVS8 624 aaPredicted RBP12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 CLSTN1O94985 981 aa12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 C4BPAP04003 597 aaKnown RBP12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 NR3C1P04150 777 aa12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 MYL1P05976 194 aa12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 FAM163BP0C2L3 166 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms