RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 AQP5P55064 265 aa16.95■□□□□ 0.3
MCF2L-229ENST00000488765 SMAD1Q15797 465 aaKnown RBP16.95■□□□□ 0.3
MCF2L-229ENST00000488765 ANKRD20A4Q4UJ75 823 aa16.95■□□□□ 0.3
MCF2L-229ENST00000488765 SLC2A7Q6PXP3 512 aa16.95■□□□□ 0.3
MCF2L-229ENST00000488765 ZNF512Q96ME7 567 aaPredicted RBP16.95■□□□□ 0.3
MCF2L-229ENST00000488765 MMP19Q99542 508 aa16.95■□□□□ 0.3
MCF2L-229ENST00000488765 SLC13A1Q9BZW2 595 aa16.95■□□□□ 0.3
MCF2L-229ENST00000488765 TYW1Q9NV66 732 aaKnown RBP16.95■□□□□ 0.3
MCF2L-229ENST00000488765 TRNAU1APQ9NX07 287 aaKnown RBP16.95■□□□□ 0.3
MCF2L-229ENST00000488765 COL14A1Q05707 1796 aaKnown RBP16.95■□□□□ 0.3
MCF2L-229ENST00000488765 USP17L15C9J2P7 530 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 USP17L13C9JLJ4 530 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 USP17L11C9JVI0 530 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 USP17L18D6R9N7 530 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 USP17L22D6RA61 530 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 USP17L17D6RBQ6 530 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 USP17L19D6RCP7 530 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 USP17L20D6RJB6 530 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 ATP9BO43861 1147 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 FXR2P51116 673 aaKnown RBP eCLIP16.94■□□□□ 0.3
MCF2L-229ENST00000488765 MAPK10P53779 464 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 USP17L24Q0WX57 530 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 TRMT5Q32P41 509 aaKnown RBP16.94■□□□□ 0.3
MCF2L-229ENST00000488765 BRIP1Q9BX63 1249 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 PAIP1Q9H074 479 aaKnown RBP16.94■□□□□ 0.3
MCF2L-229ENST00000488765 BHMT2Q9H2M3 363 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 RANBP17Q9H2T7 1088 aaKnown RBP16.94■□□□□ 0.3
MCF2L-229ENST00000488765 CD209Q9NNX6 404 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 EURLQ9NYK6 297 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 SMG5Q9UPR3 1016 aaKnown RBP16.94■□□□□ 0.3
MCF2L-229ENST00000488765 ADAM23O75077 832 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 SRGAP2CP0DJJ0 459 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 SRGAP2BP0DMP2 458 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 GCLMP48507 274 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 GEMIN4P57678 1058 aaKnown RBP16.94■□□□□ 0.3
MCF2L-229ENST00000488765 CNGA3Q16281 694 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 SLC10A5Q5PT55 438 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 NET1Q7Z628 596 aaPredicted RBP16.94■□□□□ 0.3
MCF2L-229ENST00000488765 LRRC47Q8N1G4 583 aaKnown RBP16.94■□□□□ 0.3
MCF2L-229ENST00000488765 TTC25Q96NG3 672 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 SENP6Q9GZR1 1112 aaPredicted RBP16.94■□□□□ 0.3
MCF2L-229ENST00000488765 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.94■□□□□ 0.3
MCF2L-229ENST00000488765 POLLQ9UGP5 575 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 TMEM98Q9Y2Y6 226 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 ASTN1O14525 1302 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 PRPF4O43172 522 aaKnown RBP eCLIP16.94■□□□□ 0.31e-6■■□□□ 11.8
MCF2L-229ENST00000488765 LPXNO60711 386 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 PORP16435 677 aaPredicted RBP16.94■□□□□ 0.3
MCF2L-229ENST00000488765 HIC1Q14526 733 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 KIF22Q14807 665 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 TMCO4Q5TGY1 634 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 CCDC80Q76M96 950 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 ANKS1BQ7Z6G8 1248 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 DEPTORQ8TB45 409 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 CLIP3Q96DZ5 547 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 WNT8AQ9H1J5 351 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 ZBTB21Q9ULJ3 1066 aa16.94■□□□□ 0.3
MCF2L-229ENST00000488765 FRMPD4Q14CM0 1322 aa16.93■□□□□ 0.3
MCF2L-229ENST00000488765 CNTNAP4Q9C0A0 1308 aa16.93■□□□□ 0.3
MCF2L-229ENST00000488765 A8MU76 341 aa16.93■□□□□ 0.3
MCF2L-229ENST00000488765 CALUO43852 315 aaPredicted RBP16.93■□□□□ 0.3
MCF2L-229ENST00000488765 OXSR1O95747 527 aaPredicted RBP16.93■□□□□ 0.3
MCF2L-229ENST00000488765 RBP3P10745 1247 aa16.93■□□□□ 0.3
MCF2L-229ENST00000488765 ATF7P17544 494 aaPredicted RBP16.93■□□□□ 0.3
MCF2L-229ENST00000488765 RELAQ04206 551 aa16.93■□□□□ 0.3
MCF2L-229ENST00000488765 CYP1B1Q16678 543 aa16.93■□□□□ 0.3
MCF2L-229ENST00000488765 HSF5Q4G112 596 aaPredicted RBP16.93■□□□□ 0.3
MCF2L-229ENST00000488765 RSPH3Q86UC2 560 aa16.93■□□□□ 0.3
MCF2L-229ENST00000488765 HEPHQ9BQS7 1158 aa16.93■□□□□ 0.3
MCF2L-229ENST00000488765 DCLK3Q9C098 648 aa16.93■□□□□ 0.3
MCF2L-229ENST00000488765 RRN3Q9NYV6 651 aa16.93■□□□□ 0.3
MCF2L-229ENST00000488765 SAE1Q9UBE0 346 aaPredicted RBP16.93■□□□□ 0.3
MCF2L-229ENST00000488765 TELO2Q9Y4R8 837 aa16.93■□□□□ 0.3
MCF2L-229ENST00000488765 MAD1L1Q9Y6D9 718 aa16.93■□□□□ 0.3
MCF2L-229ENST00000488765 NHSL1Q5SYE7 1610 aa16.93■□□□□ 0.3
MCF2L-229ENST00000488765 EIF2B2P49770 351 aaKnown RBP16.93■□□□□ 0.3
MCF2L-229ENST00000488765 EDRF1Q3B7T1 1238 aa16.93■□□□□ 0.3
MCF2L-229ENST00000488765 LZICQ8WZA0 190 aa16.93■□□□□ 0.3
MCF2L-229ENST00000488765 APEX2Q9UBZ4 518 aa16.93■□□□□ 0.3
MCF2L-229ENST00000488765 MTO1Q9Y2Z2 717 aaKnown RBP16.93■□□□□ 0.3
MCF2L-229ENST00000488765 FAM155BO75949 473 aa16.92■□□□□ 0.3
MCF2L-229ENST00000488765 HOXD11P31277 338 aaPredicted RBP16.92■□□□□ 0.3
MCF2L-229ENST00000488765 RCVRNP35243 200 aa16.92■□□□□ 0.3
MCF2L-229ENST00000488765 PHEXP78562 749 aa16.92■□□□□ 0.3
MCF2L-229ENST00000488765 EFHC1Q5JVL4 640 aa16.92■□□□□ 0.3
MCF2L-229ENST00000488765 DIS3LQ8TF46 1054 aaKnown RBP16.92■□□□□ 0.3
MCF2L-229ENST00000488765 KCNN1Q92952 543 aa16.92■□□□□ 0.3
MCF2L-229ENST00000488765 PPP1R10Q96QC0 940 aaKnown RBP16.92■□□□□ 0.3
MCF2L-229ENST00000488765 DBNDD1Q9H9R9 158 aa16.92■□□□□ 0.3
MCF2L-229ENST00000488765 DTNAQ9Y4J8 743 aa16.92■□□□□ 0.3
MCF2L-229ENST00000488765 COL16A1Q07092 1604 aaPredicted RBP16.92■□□□□ 0.3
MCF2L-229ENST00000488765 A0A088AWK7 358 aa16.92■□□□□ 0.3
MCF2L-229ENST00000488765 ZC3H11AO75152 810 aaKnown RBP eCLIP16.92■□□□□ 0.3
MCF2L-229ENST00000488765 ARSEP51690 589 aa16.92■□□□□ 0.3
MCF2L-229ENST00000488765 RAP1GDS1P52306 607 aa16.92■□□□□ 0.3
MCF2L-229ENST00000488765 SLC5A3P53794 718 aa16.92■□□□□ 0.3
MCF2L-229ENST00000488765 TMPRSS15P98073 1019 aa16.92■□□□□ 0.3
MCF2L-229ENST00000488765 C3orf62Q6ZUJ4 267 aa16.92■□□□□ 0.3
MCF2L-229ENST00000488765 NOP9Q86U38 636 aaKnown RBP16.92■□□□□ 0.3
MCF2L-229ENST00000488765 ZNF276Q8N554 614 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms