RNA–Protein interactions for RNA: ENST00000488628.1

SUN1-233, Transcript of Sad1 and UNC84 domain containing 1, human

TSL 4

Gene SUN1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUN1-233	ENST00000488628	EXOC3	O60645	756 aa		18.3	■□□□□ 0.52
SUN1-233	ENST00000488628	TADA3	O75528	432 aa		18.3	■□□□□ 0.52
SUN1-233	ENST00000488628	PRR29	P0C7W0	189 aa		18.3	■□□□□ 0.52
SUN1-233	ENST00000488628	WARS	P23381	471 aa	Known RBP	18.3	■□□□□ 0.52
SUN1-233	ENST00000488628	CCNE1	P24864	410 aa		18.3	■□□□□ 0.52
SUN1-233	ENST00000488628	PCSK1	P29120	753 aa		18.3	■□□□□ 0.52
SUN1-233	ENST00000488628	NDUFA8	P51970	172 aa		18.3	■□□□□ 0.52
SUN1-233	ENST00000488628	WDR44	Q5JSH3	913 aa		18.3	■□□□□ 0.52
SUN1-233	ENST00000488628	TXNDC8	Q6A555	127 aa		18.3	■□□□□ 0.52
SUN1-233	ENST00000488628	DPH6	Q7L8W6	267 aa		18.3	■□□□□ 0.52
SUN1-233	ENST00000488628	MAB21L3	Q8N8X9	362 aa		18.3	■□□□□ 0.52
SUN1-233	ENST00000488628	FAM3C	Q92520	227 aa		18.3	■□□□□ 0.52
SUN1-233	ENST00000488628	ELMO3	Q96BJ8	720 aa		18.3	■□□□□ 0.52
SUN1-233	ENST00000488628	GCNA	Q96QF7	691 aa		18.3	■□□□□ 0.52
SUN1-233	ENST00000488628	MMS19	Q96T76	1030 aa		18.3	■□□□□ 0.52
SUN1-233	ENST00000488628	SYT15	Q9BQS2	421 aa		18.3	■□□□□ 0.52
SUN1-233	ENST00000488628	ABCB6	Q9NP58	842 aa		18.3	■□□□□ 0.52
SUN1-233	ENST00000488628	EXOC1	Q9NV70	894 aa		18.3	■□□□□ 0.52
SUN1-233	ENST00000488628	DMAC2	Q9NW81	257 aa		18.3	■□□□□ 0.52
SUN1-233	ENST00000488628	CCL26	Q9Y258	94 aa		18.3	■□□□□ 0.52
SUN1-233	ENST00000488628	FAM237A	A0A1B0GTK4	181 aa		18.29	■□□□□ 0.52
SUN1-233	ENST00000488628	MAN2B1	O00754	1011 aa		18.29	■□□□□ 0.52
SUN1-233	ENST00000488628	DPYSL4	O14531	572 aa		18.29	■□□□□ 0.52
SUN1-233	ENST00000488628	WEE1	P30291	646 aa		18.29	■□□□□ 0.52
SUN1-233	ENST00000488628	RPS9	P46781	194 aa	Known RBP	18.29	■□□□□ 0.52
SUN1-233	ENST00000488628	MYL6	P60660	151 aa		18.29	■□□□□ 0.52
SUN1-233	ENST00000488628	TNK2	Q07912	1038 aa		18.29	■□□□□ 0.52
SUN1-233	ENST00000488628	MTAP	Q13126	283 aa		18.29	■□□□□ 0.52
SUN1-233	ENST00000488628	CFAP221	Q4G0U5	840 aa		18.29	■□□□□ 0.52
SUN1-233	ENST00000488628	TSSK4	Q6SA08	328 aa		18.29	■□□□□ 0.52
SUN1-233	ENST00000488628	SPATA2L	Q8IUW3	424 aa	Predicted RBP	18.29	■□□□□ 0.52
SUN1-233	ENST00000488628	SCN4B	Q8IWT1	228 aa		18.29	■□□□□ 0.52
SUN1-233	ENST00000488628	CMTM8	Q8IZV2	173 aa		18.29	■□□□□ 0.52
SUN1-233	ENST00000488628	RIN3	Q8TB24	985 aa		18.29	■□□□□ 0.52
SUN1-233	ENST00000488628	CSGALNACT1	Q8TDX6	532 aa		18.29	■□□□□ 0.52
SUN1-233	ENST00000488628	MYLPF	Q96A32	169 aa		18.29	■□□□□ 0.52
SUN1-233	ENST00000488628	KCTD10	Q9H3F6	313 aa		18.29	■□□□□ 0.52
SUN1-233	ENST00000488628	GOLPH3L	Q9H4A5	285 aa		18.29	■□□□□ 0.52
SUN1-233	ENST00000488628	GDPD2	Q9HCC8	539 aa		18.29	■□□□□ 0.52
SUN1-233	ENST00000488628	OBP2A	Q9NY56	170 aa		18.29	■□□□□ 0.52
SUN1-233	ENST00000488628	GTSE1	Q9NYZ3	720 aa		18.29	■□□□□ 0.52
SUN1-233	ENST00000488628	CGN	Q9P2M7	1197 aa	Known RBP	18.29	■□□□□ 0.52
SUN1-233	ENST00000488628	MRPS17	Q9Y2R5	130 aa	Known RBP	18.29	■□□□□ 0.52
SUN1-233	ENST00000488628	DMXL1	Q9Y485	3027 aa		18.29	■□□□□ 0.52
SUN1-233	ENST00000488628	LAMTOR5	O43504	91 aa		18.28	■□□□□ 0.52
SUN1-233	ENST00000488628	NOL4	O94818	638 aa		18.28	■□□□□ 0.52
SUN1-233	ENST00000488628	CSH1	P0DML2	217 aa		18.28	■□□□□ 0.52
SUN1-233	ENST00000488628	CSH2	P0DML3	217 aa		18.28	■□□□□ 0.52
SUN1-233	ENST00000488628	SYK	P43405	635 aa		18.28	■□□□□ 0.52
SUN1-233	ENST00000488628	RPL10A	P62906	217 aa	Known RBP	18.28	■□□□□ 0.52
SUN1-233	ENST00000488628	CSTF1	Q05048	431 aa	Known RBP	18.28	■□□□□ 0.52
SUN1-233	ENST00000488628	TXNDC11	Q6PKC3	985 aa		18.28	■□□□□ 0.52
SUN1-233	ENST00000488628	BPIFB1	Q8TDL5	484 aa		18.28	■□□□□ 0.52
SUN1-233	ENST00000488628	USP13	Q92995	863 aa	Predicted RBP	18.28	■□□□□ 0.52
SUN1-233	ENST00000488628	XYLT2	Q9H1B5	865 aa		18.28	■□□□□ 0.52
SUN1-233	ENST00000488628	LMAN1L	Q9HAT1	526 aa		18.28	■□□□□ 0.52
SUN1-233	ENST00000488628	USP25	Q9UHP3	1055 aa		18.28	■□□□□ 0.52
SUN1-233	ENST00000488628	CDH9	Q9ULB4	789 aa		18.28	■□□□□ 0.52
SUN1-233	ENST00000488628	LRRIQ3	A6PVS8	624 aa	Predicted RBP	18.27	■□□□□ 0.52
SUN1-233	ENST00000488628	NCAM2	O15394	837 aa		18.27	■□□□□ 0.52
SUN1-233	ENST00000488628	RPN1	P04843	607 aa	Known RBP	18.27	■□□□□ 0.52
SUN1-233	ENST00000488628	CHRNB1	P11230	501 aa		18.27	■□□□□ 0.52
SUN1-233	ENST00000488628	BDNF	P23560	247 aa		18.27	■□□□□ 0.52
SUN1-233	ENST00000488628	GNL1	P36915	607 aa	Predicted RBP	18.27	■□□□□ 0.52
SUN1-233	ENST00000488628	MAGEA9	P43362	315 aa		18.27	■□□□□ 0.52
SUN1-233	ENST00000488628	KPNA1	P52294	538 aa	Predicted RBP	18.27	■□□□□ 0.52
SUN1-233	ENST00000488628	DLG4	P78352	724 aa		18.27	■□□□□ 0.52
SUN1-233	ENST00000488628	PSMD2	Q13200	908 aa		18.27	■□□□□ 0.52
SUN1-233	ENST00000488628	WDR72	Q3MJ13	1102 aa		18.27	■□□□□ 0.52
SUN1-233	ENST00000488628	ARHGAP29	Q52LW3	1261 aa		18.27	■□□□□ 0.52
SUN1-233	ENST00000488628	TDRD10	Q5VZ19	366 aa	Known RBP	18.27	■□□□□ 0.52
SUN1-233	ENST00000488628	ADSSL1	Q8N142	457 aa		18.27	■□□□□ 0.52
SUN1-233	ENST00000488628	FSIP1	Q8NA03	581 aa		18.27	■□□□□ 0.52
SUN1-233	ENST00000488628	PARD3B	Q8TEW8	1205 aa		18.27	■□□□□ 0.52
SUN1-233	ENST00000488628	FUBP3	Q96I24	572 aa	Known RBP eCLIP	18.27	■□□□□ 0.52
SUN1-233	ENST00000488628	MYRFL	Q96LU7	910 aa		18.27	■□□□□ 0.52
SUN1-233	ENST00000488628	SLC22A12	Q96S37	553 aa		18.27	■□□□□ 0.52
SUN1-233	ENST00000488628	DPEP3	Q9H4B8	488 aa		18.27	■□□□□ 0.52
SUN1-233	ENST00000488628	RBM12	Q9NTZ6	932 aa	Known RBP	18.27	■□□□□ 0.52
SUN1-233	ENST00000488628	MAGEC2	Q9UBF1	373 aa	Predicted RBP	18.27	■□□□□ 0.52
SUN1-233	ENST00000488628	HELZ	P42694	1942 aa	Known RBP	18.26	■□□□□ 0.51
SUN1-233	ENST00000488628	SPECC1L-ADORA2A	F8WAN1	911 aa		18.26	■□□□□ 0.51
SUN1-233	ENST00000488628	TACC1	O75410	805 aa		18.26	■□□□□ 0.51
SUN1-233	ENST00000488628	MAGEA11	P43364	429 aa		18.26	■□□□□ 0.51
SUN1-233	ENST00000488628	CYP27A1	Q02318	531 aa		18.26	■□□□□ 0.51
SUN1-233	ENST00000488628	TRPC3	Q13507	836 aa		18.26	■□□□□ 0.51
SUN1-233	ENST00000488628	GAS6	Q14393	721 aa		18.26	■□□□□ 0.51
SUN1-233	ENST00000488628	MDH1B	Q5I0G3	518 aa		18.26	■□□□□ 0.51
SUN1-233	ENST00000488628	MON1A	Q86VX9	555 aa		18.26	■□□□□ 0.51
SUN1-233	ENST00000488628	SLC9A9	Q8IVB4	645 aa		18.26	■□□□□ 0.51
SUN1-233	ENST00000488628	CELF5	Q8N6W0	485 aa	Known RBP	18.26	■□□□□ 0.51
SUN1-233	ENST00000488628	OR6B3	Q8NGW1	331 aa		18.26	■□□□□ 0.51
SUN1-233	ENST00000488628	TRMT2B	Q96GJ1	504 aa	Known RBP	18.26	■□□□□ 0.51
SUN1-233	ENST00000488628	PCED1B	Q96HM7	432 aa		18.26	■□□□□ 0.51
SUN1-233	ENST00000488628	CYP2S1	Q96SQ9	504 aa		18.26	■□□□□ 0.51
SUN1-233	ENST00000488628	CHRD	Q9H2X0	955 aa		18.26	■□□□□ 0.51
SUN1-233	ENST00000488628	SNX25	Q9H3E2	840 aa		18.26	■□□□□ 0.51
SUN1-233	ENST00000488628	GKN1	Q9NS71	199 aa		18.26	■□□□□ 0.51
SUN1-233	ENST00000488628	NXF1	Q9UBU9	619 aa	Known RBP	18.26	■□□□□ 0.51
SUN1-233	ENST00000488628	FBXO4	Q9UKT5	387 aa		18.26	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms