RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 PCSK4Q6UW60 755 aa5.89□□□□□ -1.47
BRCA1-217ENST00000487825 Q6ZVL8 140 aa5.89□□□□□ -1.47
BRCA1-217ENST00000487825 FAM43AQ8N2R8 423 aa5.89□□□□□ -1.47
BRCA1-217ENST00000487825 GPR156Q8NFN8 814 aa5.89□□□□□ -1.47
BRCA1-217ENST00000487825 TBC1D16Q8TBP0 767 aa5.89□□□□□ -1.47
BRCA1-217ENST00000487825 RAET1EQ8TD07 263 aa5.89□□□□□ -1.47
BRCA1-217ENST00000487825 BRI3BPQ8WY22 251 aa5.89□□□□□ -1.47
BRCA1-217ENST00000487825 PHACTR3Q96KR7 559 aa5.89□□□□□ -1.47
BRCA1-217ENST00000487825 UTP14AQ9BVJ6 771 aaKnown RBP5.89□□□□□ -1.47
BRCA1-217ENST00000487825 C1QTNF1Q9BXJ1 281 aa5.89□□□□□ -1.47
BRCA1-217ENST00000487825 AKIP1Q9NQ31 210 aa5.89□□□□□ -1.47
BRCA1-217ENST00000487825 ANKFY1Q9P2R3 1169 aa5.89□□□□□ -1.47
BRCA1-217ENST00000487825 CHST2Q9Y4C5 530 aa5.89□□□□□ -1.47
BRCA1-217ENST00000487825 HS3ST4Q9Y661 456 aa5.89□□□□□ -1.47
BRCA1-217ENST00000487825 ADGRA2Q96PE1 1338 aa5.89□□□□□ -1.47
BRCA1-217ENST00000487825 MYH3P11055 1940 aa5.89□□□□□ -1.47
BRCA1-217ENST00000487825 RNASET2O00584 256 aaKnown RBP5.88□□□□□ -1.47
BRCA1-217ENST00000487825 CLSTN1O94985 981 aa5.88□□□□□ -1.47
BRCA1-217ENST00000487825 EYA4O95677 639 aa5.88□□□□□ -1.47
BRCA1-217ENST00000487825 FOSL2P15408 326 aa5.88□□□□□ -1.47
BRCA1-217ENST00000487825 ZSCAN20P17040 1043 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-217ENST00000487825 SRSF2Q01130 221 aaKnown RBP5.88□□□□□ -1.47
BRCA1-217ENST00000487825 ADRM1Q16186 407 aa5.88□□□□□ -1.47
BRCA1-217ENST00000487825 KRTAP15-1Q3LI76 137 aa5.88□□□□□ -1.47
BRCA1-217ENST00000487825 NECAB2Q7Z6G3 386 aa5.88□□□□□ -1.47
BRCA1-217ENST00000487825 ANKRD13AQ8IZ07 590 aa5.88□□□□□ -1.47
BRCA1-217ENST00000487825 DIS3LQ8TF46 1054 aaKnown RBP5.88□□□□□ -1.47
BRCA1-217ENST00000487825 FATE1Q969F0 183 aa5.88□□□□□ -1.47
BRCA1-217ENST00000487825 OPTNQ96CV9 577 aa5.88□□□□□ -1.47
BRCA1-217ENST00000487825 AHCYL2Q96HN2 611 aaKnown RBP5.88□□□□□ -1.47
BRCA1-217ENST00000487825 ACE2Q9BYF1 805 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-217ENST00000487825 ZCCHC17Q9NP64 241 aaKnown RBP5.88□□□□□ -1.47
BRCA1-217ENST00000487825 DMRT3Q9NQL9 472 aa5.88□□□□□ -1.47
BRCA1-217ENST00000487825 MYO9BQ13459 2157 aa5.88□□□□□ -1.47
BRCA1-217ENST00000487825 COL3A1P02461 1466 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-217ENST00000487825 PTPRFP10586 1907 aa5.87□□□□□ -1.47
BRCA1-217ENST00000487825 USP34Q70CQ2 3546 aa5.87□□□□□ -1.47
BRCA1-217ENST00000487825 CFAP54Q96N23 3096 aa5.87□□□□□ -1.47
BRCA1-217ENST00000487825 CCL15-CCL14A0A0B4J2E2 113 aa5.87□□□□□ -1.47
BRCA1-217ENST00000487825 PPFIA4O75335 1185 aa5.87□□□□□ -1.47
BRCA1-217ENST00000487825 TFRCP02786 760 aaKnown RBP5.87□□□□□ -1.47
BRCA1-217ENST00000487825 RBP3P10745 1247 aa5.87□□□□□ -1.47
BRCA1-217ENST00000487825 MTHFD2P13995 350 aa5.87□□□□□ -1.47
BRCA1-217ENST00000487825 CPEP16870 476 aa5.87□□□□□ -1.47
BRCA1-217ENST00000487825 MGAT1P26572 445 aa5.87□□□□□ -1.47
BRCA1-217ENST00000487825 HOXD10P28358 340 aa5.87□□□□□ -1.47
BRCA1-217ENST00000487825 ECHS1P30084 290 aa5.87□□□□□ -1.47
BRCA1-217ENST00000487825 PSMC4P43686 418 aa5.87□□□□□ -1.47
BRCA1-217ENST00000487825 FLT3LGP49771 235 aa5.87□□□□□ -1.47
BRCA1-217ENST00000487825 MMP14P50281 582 aa5.87□□□□□ -1.47
BRCA1-217ENST00000487825 PURAQ00577 322 aaKnown RBP5.87□□□□□ -1.47
BRCA1-217ENST00000487825 CCL15Q16663 113 aa5.87□□□□□ -1.47
BRCA1-217ENST00000487825 PDCD4Q53EL6 469 aaKnown RBP5.87□□□□□ -1.47
BRCA1-217ENST00000487825 MUM1L1Q5H9M0 696 aa5.87□□□□□ -1.47
BRCA1-217ENST00000487825 KCNK18Q7Z418 384 aa5.87□□□□□ -1.47
BRCA1-217ENST00000487825 TRMT2AQ8IZ69 625 aaKnown RBP5.87□□□□□ -1.47
BRCA1-217ENST00000487825 NGEFQ8N5V2 710 aa5.87□□□□□ -1.47
BRCA1-217ENST00000487825 USP38Q8NB14 1042 aa5.87□□□□□ -1.47
BRCA1-217ENST00000487825 OR7D4Q8NG98 312 aa5.87□□□□□ -1.47
BRCA1-217ENST00000487825 GPR150Q8NGU9 434 aa5.87□□□□□ -1.47
BRCA1-217ENST00000487825 ZFP28Q8NHY6 868 aa5.87□□□□□ -1.47
BRCA1-217ENST00000487825 WDR66Q8TBY9 1149 aa5.87□□□□□ -1.47
BRCA1-217ENST00000487825 COG1Q8WTW3 980 aa5.87□□□□□ -1.47
BRCA1-217ENST00000487825 STON2Q8WXE9 905 aa5.87□□□□□ -1.47
BRCA1-217ENST00000487825 CELF1Q92879 486 aaKnown RBP5.87□□□□□ -1.47
BRCA1-217ENST00000487825 ZG16BQ96DA0 208 aa5.87□□□□□ -1.47
BRCA1-217ENST00000487825 MYEOVQ96EZ4 313 aa5.87□□□□□ -1.47
BRCA1-217ENST00000487825 ZBED3Q96IU2 234 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-217ENST00000487825 UHRF1Q96T88 793 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-217ENST00000487825 P2RX7Q99572 595 aaKnown RBP5.87□□□□□ -1.47
BRCA1-217ENST00000487825 DEFB129Q9H1M3 183 aa5.87□□□□□ -1.47
BRCA1-217ENST00000487825 DNAJC28Q9NX36 388 aa5.87□□□□□ -1.47
BRCA1-217ENST00000487825 USP15Q9Y4E8 981 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-217ENST00000487825 A0A1B0GUL6 1792 aa5.86□□□□□ -1.47
BRCA1-217ENST00000487825 ZNF804BA4D1E1 1349 aa5.86□□□□□ -1.47
BRCA1-217ENST00000487825 SH3TC1Q8TE82 1336 aa5.86□□□□□ -1.47
BRCA1-217ENST00000487825 MYO3BQ8WXR4 1341 aa5.86□□□□□ -1.47
BRCA1-217ENST00000487825 CXorf49A8MYA2 514 aaPredicted RBP5.86□□□□□ -1.47
BRCA1-217ENST00000487825 WDHD1O75717 1129 aaPredicted RBP5.86□□□□□ -1.47
BRCA1-217ENST00000487825 PRKD3O94806 890 aa5.86□□□□□ -1.47
BRCA1-217ENST00000487825 UFL1O94874 794 aa5.86□□□□□ -1.47
BRCA1-217ENST00000487825 CHN2P52757 468 aa5.86□□□□□ -1.47
BRCA1-217ENST00000487825 PER3P56645 1201 aa5.86□□□□□ -1.47
BRCA1-217ENST00000487825 RAP2BP61225 183 aa5.86□□□□□ -1.47
BRCA1-217ENST00000487825 FAM47AQ5JRC9 791 aa5.86□□□□□ -1.47
BRCA1-217ENST00000487825 ATXN7L2Q5T6C5 722 aaPredicted RBP5.86□□□□□ -1.47
BRCA1-217ENST00000487825 C17orf99Q6UX52 265 aa5.86□□□□□ -1.47
BRCA1-217ENST00000487825 DEFB118Q96PH6 123 aa5.86□□□□□ -1.47
BRCA1-217ENST00000487825 WDR11Q9BZH6 1224 aa5.86□□□□□ -1.47
BRCA1-217ENST00000487825 TTYH1Q9H313 450 aaPredicted RBP5.86□□□□□ -1.47
BRCA1-217ENST00000487825 LDAHQ9H6V9 325 aa5.86□□□□□ -1.47
BRCA1-217ENST00000487825 GREM2Q9H772 168 aa5.86□□□□□ -1.47
BRCA1-217ENST00000487825 BCO1Q9HAY6 547 aa5.86□□□□□ -1.47
BRCA1-217ENST00000487825 ZBTB21Q9ULJ3 1066 aa5.86□□□□□ -1.47
BRCA1-217ENST00000487825 MAP3K2Q9Y2U5 619 aa5.86□□□□□ -1.47
BRCA1-217ENST00000487825 PLXNB2O15031 1838 aa5.85□□□□□ -1.47
BRCA1-217ENST00000487825 UNC119BA6NIH7 251 aa5.85□□□□□ -1.47
BRCA1-217ENST00000487825 TMEM200CA6NKL6 621 aa5.85□□□□□ -1.47
BRCA1-217ENST00000487825 DRGXA6NNA5 263 aa5.85□□□□□ -1.47
BRCA1-217ENST00000487825 GPR39O43194 453 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms