RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 MXRA7P84157 204 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 DUSP8Q13202 625 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 RIN1Q13671 783 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 IDI1Q13907 227 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 NFYCQ13952 458 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 NBPF8Q3BBV2 869 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 CRB2Q5IJ48 1285 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 FAM26FQ5R3K3 315 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 CATSPERGQ6ZRH7 1159 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 MMS22LQ6ZRQ5 1243 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 USP37Q86T82 979 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 KBTBD2Q8IY47 623 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 CACNA2D3Q8IZS8 1091 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 SDR16C5Q8N3Y7 309 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 SLC17A8Q8NDX2 589 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 GCC1Q96CN9 775 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 LCORQ96JN0 433 aaPredicted RBP4.73□□□□□ -1.65
PTCD3-216ENST00000487043 TCF25Q9BQ70 676 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 MAGEH1Q9H213 219 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 ITM2CQ9NQX7 267 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 RLIMQ9NVW2 624 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 FBXO34Q9NWN3 711 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 DACT1Q9NYF0 836 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 ZNF212Q9UDV6 495 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 HDAC9Q9UKV0 1011 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 AGAP1Q9UPQ3 857 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 MYRFQ9Y2G1 1151 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 PLEKHM1Q9Y4G2 1056 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 CFAP65Q6ZU64 1925 aaKnown RBP4.73□□□□□ -1.65
PTCD3-216ENST00000487043 CLTCQ00610 1675 aaKnown RBP4.73□□□□□ -1.65
PTCD3-216ENST00000487043 UHRF1BP1Q6BDS2 1440 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 CLTCL1P53675 1640 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 FAM234BA2RU67 622 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 CDHR4A6H8M9 788 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 C9orf118A6NHY6 69 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 AREL1O15033 823 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 NPC1O15118 1278 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 AGFG2O95081 481 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 AGR2O95994 175 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 TXNP10599 105 aaKnown RBP4.72□□□□□ -1.65
PTCD3-216ENST00000487043 KLRC1P26715 233 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 ITGA8P53708 1063 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 LMOD3Q0VAK6 560 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 PPFIA1Q13136 1202 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 PRKG1Q13976 671 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 UBXN2BQ14CS0 331 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 SLC4A8Q2Y0W8 1093 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 KRTAP5-3Q6L8H2 238 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 PDSS2Q86YH6 399 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 CLASRPQ8N2M8 674 aaKnown RBP4.72□□□□□ -1.65
PTCD3-216ENST00000487043 CCDC150Q8NCX0 1101 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 FAM46DQ8NEK8 389 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 SHCBP1Q8NEM2 672 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 TMIEQ8NEW7 156 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 TBC1D15Q8TC07 691 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 IPO4Q8TEX9 1081 aaKnown RBP4.72□□□□□ -1.65
PTCD3-216ENST00000487043 TRAPPC12Q8WVT3 735 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 IPCEF1Q8WWN9 437 aaPredicted RBP4.72□□□□□ -1.65
PTCD3-216ENST00000487043 RAPGEF4Q8WZA2 1011 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 CFHR4Q92496 578 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 MBD6Q96DN6 1003 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 SORBS1Q9BX66 1292 aaKnown RBP4.72□□□□□ -1.65
PTCD3-216ENST00000487043 EIF2AQ9BY44 585 aaKnown RBP4.72□□□□□ -1.65
PTCD3-216ENST00000487043 MAGEB5Q9BZ81 275 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 IMPG2Q9BZV3 1241 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 TINAGL1Q9GZM7 467 aaPredicted RBP4.72□□□□□ -1.65
PTCD3-216ENST00000487043 MS4A7Q9GZW8 240 aaPredicted RBP4.72□□□□□ -1.65
PTCD3-216ENST00000487043 GPR35Q9HC97 309 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 TM7SF3Q9NS93 570 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 RRN3Q9NYV6 651 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 XPR1Q9UBH6 696 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 MID2Q9UJV3 735 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 HDAC5Q9UQL6 1122 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 TBC1D30Q9Y2I9 924 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 PAXBP1Q9Y5B6 917 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 KIF1BO60333 1816 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 RPGRIP1LQ68CZ1 1315 aa4.72□□□□□ -1.65
PTCD3-216ENST00000487043 PREX1Q8TCU6 1659 aa4.71□□□□□ -1.66
PTCD3-216ENST00000487043 SYNMO15061 1565 aa4.71□□□□□ -1.66
PTCD3-216ENST00000487043 UGGT1Q9NYU2 1555 aa4.71□□□□□ -1.66
PTCD3-216ENST00000487043 ERVK-7P63135 1459 aa4.71□□□□□ -1.66
PTCD3-216ENST00000487043 A0A087WWL8 130 aa4.71□□□□□ -1.66
PTCD3-216ENST00000487043 MROH6A6NGR9 719 aa4.71□□□□□ -1.66
PTCD3-216ENST00000487043 AQP12BA6NM10 295 aa4.71□□□□□ -1.66
PTCD3-216ENST00000487043 TBKBP1A7MCY6 615 aa4.71□□□□□ -1.66
PTCD3-216ENST00000487043 CLCA1A8K7I4 914 aa4.71□□□□□ -1.66
PTCD3-216ENST00000487043 B5MCH6 92 aa4.71□□□□□ -1.66
PTCD3-216ENST00000487043 TRIM38O00635 465 aa4.71□□□□□ -1.66
PTCD3-216ENST00000487043 KIF20AO95235 890 aa4.71□□□□□ -1.66
PTCD3-216ENST00000487043 DHRS4L1P0CG22 281 aa4.71□□□□□ -1.66
PTCD3-216ENST00000487043 SLC6A2P23975 617 aa4.71□□□□□ -1.66
PTCD3-216ENST00000487043 IL1R2P27930 398 aa4.71□□□□□ -1.66
PTCD3-216ENST00000487043 SPARCL1Q14515 664 aa4.71□□□□□ -1.66
PTCD3-216ENST00000487043 POSTNQ15063 836 aa4.71□□□□□ -1.66
PTCD3-216ENST00000487043 TAF5Q15542 800 aa4.71□□□□□ -1.66
PTCD3-216ENST00000487043 RAB30Q15771 203 aa4.71□□□□□ -1.66
PTCD3-216ENST00000487043 BMT2Q1RMZ1 405 aa4.71□□□□□ -1.66
PTCD3-216ENST00000487043 AMOTQ4VCS5 1084 aa4.71□□□□□ -1.66
PTCD3-216ENST00000487043 ATXN7L2Q5T6C5 722 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-216ENST00000487043 LVRNQ6Q4G3 990 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms