RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 PDPRQ8NCN5 879 aa4.35□□□□□ -1.71
SNRNP27-204ENST00000487029 MORC4Q8TE76 937 aa4.35□□□□□ -1.71
SNRNP27-204ENST00000487029 BOD1Q96IK1 185 aa4.35□□□□□ -1.71
SNRNP27-204ENST00000487029 TRIM54Q9BYV2 358 aa4.35□□□□□ -1.71
SNRNP27-204ENST00000487029 BRD9Q9H8M2 597 aa4.35□□□□□ -1.71
SNRNP27-204ENST00000487029 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.35□□□□□ -1.71
SNRNP27-204ENST00000487029 FBXO34Q9NWN3 711 aa4.35□□□□□ -1.71
SNRNP27-204ENST00000487029 MED16Q9Y2X0 877 aa4.35□□□□□ -1.71
SNRNP27-204ENST00000487029 SNX13Q9Y5W8 968 aa4.35□□□□□ -1.71
SNRNP27-204ENST00000487029 USP19O94966 1318 aa4.35□□□□□ -1.71
SNRNP27-204ENST00000487029 PRSS29PA6NIE9 313 aa4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 RASA4BC9J798 803 aa4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 TP73O15350 636 aa4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 RASA4O43374 803 aa4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 GNAI2P04899 355 aa4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 RARBP10826 455 aa4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 ZKSCAN1P17029 563 aaPredicted RBP4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 FGFR4P22455 802 aa4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 PRIM2P49643 509 aa4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 CASP5P51878 434 aa4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 ARFIP2P53365 341 aa4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 SUMO3P55854 103 aaPredicted RBP4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 NOMO3P69849 1222 aa4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 FMO1Q01740 532 aa4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 HABP2Q14520 560 aaPredicted RBP4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 LONRF3Q496Y0 759 aa4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 TOGARAM2Q6ZUX3 1019 aa4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 GRASPQ7Z6J2 395 aaPredicted RBP4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 DPP9Q86TI2 863 aa4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 SPICE1Q8N0Z3 855 aa4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 FITM2Q8N6M3 262 aa4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 OR6B3Q8NGW1 331 aa4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 PTCD3Q96EY7 689 aaKnown RBP4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 CCDC138Q96M89 665 aa4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 UROC1Q96N76 676 aa4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 P2RX7Q99572 595 aaKnown RBP4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 GSTO2Q9H4Y5 243 aa4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 UNKLQ9H9P5 680 aaKnown RBP4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 GALNT9Q9HCQ5 603 aa4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 KCTD5Q9NXV2 234 aa4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 CPNE7Q9UBL6 633 aa4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 TAGLN3Q9UI15 199 aa4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 CORO2BQ9UQ03 480 aa4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 RIPOR2Q9Y4F9 1068 aa4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.34□□□□□ -1.71
SNRNP27-204ENST00000487029 CACNA1IQ9P0X4 2223 aa4.34□□□□□ -1.72
SNRNP27-204ENST00000487029 CDHR4A6H8M9 788 aa4.33□□□□□ -1.72
SNRNP27-204ENST00000487029 PLEKHD1A6NEE1 506 aa4.33□□□□□ -1.72
SNRNP27-204ENST00000487029 KPNA5O15131 536 aa4.33□□□□□ -1.72
SNRNP27-204ENST00000487029 EIF3JO75822 258 aaKnown RBP4.33□□□□□ -1.72
SNRNP27-204ENST00000487029 HOXB6P17509 224 aaKnown RBP4.33□□□□□ -1.72
SNRNP27-204ENST00000487029 SLC6A2P23975 617 aa4.33□□□□□ -1.72
SNRNP27-204ENST00000487029 ITPKBP27987 946 aa4.33□□□□□ -1.72
SNRNP27-204ENST00000487029 SERPINB3P29508 390 aa4.33□□□□□ -1.72
SNRNP27-204ENST00000487029 PHKA1P46020 1223 aa4.33□□□□□ -1.72
SNRNP27-204ENST00000487029 HSD11B2P80365 405 aa4.33□□□□□ -1.72
SNRNP27-204ENST00000487029 ZNF543Q08ER8 600 aa4.33□□□□□ -1.72
SNRNP27-204ENST00000487029 CYP2A13Q16696 494 aa4.33□□□□□ -1.72
SNRNP27-204ENST00000487029 UTP14CQ5TAP6 766 aaKnown RBP4.33□□□□□ -1.72
SNRNP27-204ENST00000487029 ZNF783Q6ZMS7 281 aa4.33□□□□□ -1.72
SNRNP27-204ENST00000487029 ACRBPQ8NEB7 543 aa4.33□□□□□ -1.72
SNRNP27-204ENST00000487029 TBC1D15Q8TC07 691 aa4.33□□□□□ -1.72
SNRNP27-204ENST00000487029 DDX17Q92841 729 aaKnown RBP4.33□□□□□ -1.72
SNRNP27-204ENST00000487029 SCAMP4Q969E2 229 aa4.33□□□□□ -1.72
SNRNP27-204ENST00000487029 MSLNLQ96KJ4 702 aa4.33□□□□□ -1.72
SNRNP27-204ENST00000487029 DPH1Q9BZG8 443 aa4.33□□□□□ -1.72
SNRNP27-204ENST00000487029 UNKQ9C0B0 810 aaKnown RBP4.33□□□□□ -1.72
SNRNP27-204ENST00000487029 GPR35Q9HC97 309 aa4.33□□□□□ -1.72
SNRNP27-204ENST00000487029 AFF4Q9UHB7 1163 aaKnown RBP4.33□□□□□ -1.72
SNRNP27-204ENST00000487029 SLC45A2Q9UMX9 530 aa4.33□□□□□ -1.72
SNRNP27-204ENST00000487029 DAAM1Q9Y4D1 1078 aa4.33□□□□□ -1.72
SNRNP27-204ENST00000487029 ZNF785A8K8V0 405 aa4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 TRIM38O00635 465 aa4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 TBC1D4O60343 1298 aa4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 AGFG2O95081 481 aa4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 IL18RAPO95256 599 aa4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 CHEK2O96017 543 aa4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 THP07101 528 aa4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 ELFN1P0C7U0 828 aa4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 PSMC1P62191 440 aaKnown RBP4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 DAG1Q14118 895 aa4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 GORABQ5T7V8 394 aa4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 XRRA1Q6P2D8 792 aa4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 SESTD1Q86VW0 696 aa4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 OR2C3Q8N628 320 aa4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 PCSK9Q8NBP7 692 aaKnown RBP4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 DEPTORQ8TB45 409 aa4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 NMD3Q96D46 503 aaKnown RBP4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 ZC3H10Q96K80 434 aaKnown RBP4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 SGCZQ96LD1 299 aa4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 RIPOR3Q96MK2 946 aa4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 TIMP4Q99727 224 aa4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 ARPC5LQ9BPX5 153 aa4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 CHMP4AQ9BY43 222 aa4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 SIK2Q9H0K1 926 aa4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 MYH16Q9H6N6 1097 aa4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 CPNE5Q9HCH3 593 aa4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 PNPLA8Q9NP80 782 aa4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 STARD7Q9NQZ5 370 aa4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 SACM1LQ9NTJ5 587 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms