RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 MARCH5Q9NX47 278 aa15.27■□□□□ 0.03
COL9A1-207ENST00000486080 PRKAG2Q9UGJ0 569 aa15.27■□□□□ 0.03
COL9A1-207ENST00000486080 PCDHB8Q9UN66 801 aa15.27■□□□□ 0.03
COL9A1-207ENST00000486080 PACSIN2Q9UNF0 486 aaPredicted RBP15.27■□□□□ 0.03
COL9A1-207ENST00000486080 FAN1Q9Y2M0 1017 aa15.27■□□□□ 0.03
COL9A1-207ENST00000486080 HYOU1Q9Y4L1 999 aa15.27■□□□□ 0.03
COL9A1-207ENST00000486080 PIK3R2O00459 728 aa15.26■□□□□ 0.03
COL9A1-207ENST00000486080 CLDN5O00501 218 aa15.26■□□□□ 0.03
COL9A1-207ENST00000486080 MTA2O94776 668 aa15.26■□□□□ 0.03
COL9A1-207ENST00000486080 ERBB2P04626 1255 aa15.26■□□□□ 0.03
COL9A1-207ENST00000486080 CALB1P05937 261 aa15.26■□□□□ 0.03
COL9A1-207ENST00000486080 RGS7P49802 495 aa15.26■□□□□ 0.03
COL9A1-207ENST00000486080 MAMLD1Q13495 774 aa15.26■□□□□ 0.03
COL9A1-207ENST00000486080 OVOS1Q6IE37 1185 aa15.26■□□□□ 0.03
COL9A1-207ENST00000486080 PLEKHA7Q6IQ23 1121 aa15.26■□□□□ 0.03
COL9A1-207ENST00000486080 PMF1Q6P1K2 205 aa15.26■□□□□ 0.03
COL9A1-207ENST00000486080 PAQR9Q6ZVX9 377 aa15.26■□□□□ 0.03
COL9A1-207ENST00000486080 SLFN11Q7Z7L1 901 aa15.26■□□□□ 0.03
COL9A1-207ENST00000486080 DAAM2Q86T65 1068 aa15.26■□□□□ 0.03
COL9A1-207ENST00000486080 TMEM173Q86WV6 379 aaPredicted RBP15.26■□□□□ 0.03
COL9A1-207ENST00000486080 TLR10Q9BXR5 811 aa15.26■□□□□ 0.03
COL9A1-207ENST00000486080 UVRAGQ9P2Y5 699 aa15.26■□□□□ 0.03
COL9A1-207ENST00000486080 HESX1Q9UBX0 185 aa15.26■□□□□ 0.03
COL9A1-207ENST00000486080 ADAM28Q9UKQ2 775 aa15.26■□□□□ 0.03
COL9A1-207ENST00000486080 DSEQ9UL01 958 aa15.26■□□□□ 0.03
COL9A1-207ENST00000486080 TMEM110-MUSTN1A8MSY1 372 aa15.25■□□□□ 0.03
COL9A1-207ENST00000486080 TYMPP19971 482 aa15.25■□□□□ 0.03
COL9A1-207ENST00000486080 EPHB4P54760 987 aa15.25■□□□□ 0.03
COL9A1-207ENST00000486080 AMPD2Q01433 879 aa15.25■□□□□ 0.03
COL9A1-207ENST00000486080 PDE4CQ08493 712 aa15.25■□□□□ 0.03
COL9A1-207ENST00000486080 MEI1Q5TIA1 1274 aa15.25■□□□□ 0.03
COL9A1-207ENST00000486080 CPNE8Q86YQ8 564 aa15.25■□□□□ 0.03
COL9A1-207ENST00000486080 ANKRD52Q8NB46 1076 aa15.25■□□□□ 0.03
COL9A1-207ENST00000486080 OR10T2Q8NGX3 314 aa15.25■□□□□ 0.03
COL9A1-207ENST00000486080 BCL7CQ8WUZ0 217 aaPredicted RBP15.25■□□□□ 0.03
COL9A1-207ENST00000486080 B3GALT6Q96L58 329 aa15.25■□□□□ 0.03
COL9A1-207ENST00000486080 TMEM209Q96SK2 561 aa15.25■□□□□ 0.03
COL9A1-207ENST00000486080 HNRNPABQ99729 332 aaKnown RBP15.25■□□□□ 0.03
COL9A1-207ENST00000486080 COLEC11Q9BWP8 271 aa15.25■□□□□ 0.03
COL9A1-207ENST00000486080 B3GNT5Q9BYG0 378 aa15.25■□□□□ 0.03
COL9A1-207ENST00000486080 GPR62Q9BZJ7 368 aa15.25■□□□□ 0.03
COL9A1-207ENST00000486080 DNAI2Q9GZS0 605 aa15.25■□□□□ 0.03
COL9A1-207ENST00000486080 CWH43Q9H720 699 aa15.25■□□□□ 0.03
COL9A1-207ENST00000486080 ST7Q9NRC1 585 aa15.25■□□□□ 0.03
COL9A1-207ENST00000486080 CDH9Q9ULB4 789 aa15.25■□□□□ 0.03
COL9A1-207ENST00000486080 TCRBV5S1A1TA0A578 114 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 RIOK3O14730 519 aaKnown RBP15.24■□□□□ 0.03
COL9A1-207ENST00000486080 SRGAP2O75044 1071 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 GABBR2O75899 941 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 SYN1P17600 705 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 PCSK1P29120 753 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 MESDQ14696 234 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 PAPD7Q5XG87 772 aaKnown RBP15.24■□□□□ 0.03
COL9A1-207ENST00000486080 ZNF365Q70YC5 407 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 SPATA18Q8TC71 538 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 SLC35F5Q8WV83 523 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 ZNF689Q96CS4 500 aaPredicted RBP15.24■□□□□ 0.03
COL9A1-207ENST00000486080 C18orf8Q96DM3 657 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 PSMB7Q99436 277 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 ACBD6Q9BR61 282 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 TMEM175Q9BSA9 504 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 SYNCQ9H7C4 482 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 ANAPC7Q9UJX3 599 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 GOLGA8SH3BPF8 625 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 TRAPPC3O43617 180 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 EFCAB14O75071 495 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 GABRB2P47870 512 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 DNA2P51530 1060 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 RPL7AP62424 266 aaKnown RBP15.24■□□□□ 0.03
COL9A1-207ENST00000486080 FPGSQ05932 587 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 FAM171A1Q5VUB5 890 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 PEX26Q7Z412 305 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 NT5DC3Q86UY8 548 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 LRRTM3Q86VH5 581 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 XYLT1Q86Y38 959 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 MYCBPAPQ8TBZ2 947 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 PCED1BQ96HM7 432 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 MED10Q9BTT4 135 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 L2HGDHQ9H9P8 463 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 RC3H2Q9HBD1 1191 aaKnown RBP15.24■□□□□ 0.03
COL9A1-207ENST00000486080 ABCB6Q9NP58 842 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 PARVAQ9NVD7 372 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 TMLHEQ9NVH6 421 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 ALG6Q9Y672 507 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 NLRC5Q86WI3 1866 aa15.24■□□□□ 0.03
COL9A1-207ENST00000486080 ARHGEF37A1IGU5 675 aa15.23■□□□□ 0.03
COL9A1-207ENST00000486080 E5RJQ4 531 aa15.23■□□□□ 0.03
COL9A1-207ENST00000486080 BEST1O76090 585 aa15.23■□□□□ 0.03
COL9A1-207ENST00000486080 BAIAP3O94812 1187 aa15.23■□□□□ 0.03
COL9A1-207ENST00000486080 RABGGTBP53611 331 aa15.23■□□□□ 0.03
COL9A1-207ENST00000486080 BCAT1P54687 386 aa15.23■□□□□ 0.03
COL9A1-207ENST00000486080 YWHAHQ04917 246 aaPredicted RBP15.23■□□□□ 0.03
COL9A1-207ENST00000486080 BST2Q10589 180 aaKnown RBP15.23■□□□□ 0.03
COL9A1-207ENST00000486080 PPIGQ13427 754 aaKnown RBP eCLIP15.23■□□□□ 0.03
COL9A1-207ENST00000486080 INTS6LQ5JSJ4 861 aaKnown RBP15.23■□□□□ 0.03
COL9A1-207ENST00000486080 DNAJC24Q6P3W2 148 aa15.23■□□□□ 0.03
COL9A1-207ENST00000486080 CEP57Q86XR8 500 aa15.23■□□□□ 0.03
COL9A1-207ENST00000486080 SYCE1Q8N0S2 351 aa15.23■□□□□ 0.03
COL9A1-207ENST00000486080 THEM5Q8N1Q8 247 aa15.23■□□□□ 0.03
COL9A1-207ENST00000486080 PKMYT1Q99640 499 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms