RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 ANK1P16157 1881 aa18.2■□□□□ 0.5
VIM-205ENST00000485947 TPM1P09493 284 aa18.19■□□□□ 0.5
VIM-205ENST00000485947 AOC1P19801 751 aa18.19■□□□□ 0.5
VIM-205ENST00000485947 FMO5P49326 533 aa18.19■□□□□ 0.5
VIM-205ENST00000485947 TWF1Q12792 350 aa18.19■□□□□ 0.5
VIM-205ENST00000485947 CETN1Q12798 172 aa18.19■□□□□ 0.5
VIM-205ENST00000485947 TBX2Q13207 712 aaPredicted RBP18.19■□□□□ 0.5
VIM-205ENST00000485947 SYCP1Q15431 976 aa18.19■□□□□ 0.5
VIM-205ENST00000485947 DUOXA2Q1HG44 320 aa18.19■□□□□ 0.5
VIM-205ENST00000485947 FIGNQ5HY92 759 aa18.19■□□□□ 0.5
VIM-205ENST00000485947 DPH6Q7L8W6 267 aa18.19■□□□□ 0.5
VIM-205ENST00000485947 ITIH5Q86UX2 942 aa18.19■□□□□ 0.5
VIM-205ENST00000485947 DCP1BQ8IZD4 617 aaKnown RBP18.19■□□□□ 0.5
VIM-205ENST00000485947 C1orf127Q8N9H9 656 aa18.19■□□□□ 0.5
VIM-205ENST00000485947 ANKRD36BP1Q96IX9 119 aa18.19■□□□□ 0.5
VIM-205ENST00000485947 FNBP1Q96RU3 617 aa18.19■□□□□ 0.5
VIM-205ENST00000485947 CORO1BQ9BR76 489 aa18.19■□□□□ 0.5
VIM-205ENST00000485947 ZCWPW1Q9H0M4 648 aa18.19■□□□□ 0.5
VIM-205ENST00000485947 SMOC2Q9H3U7 446 aa18.19■□□□□ 0.5
VIM-205ENST00000485947 SIK3Q9Y2K2 1263 aa18.19■□□□□ 0.5
VIM-205ENST00000485947 YIPF1Q9Y548 306 aa18.19■□□□□ 0.5
VIM-205ENST00000485947 DCHS1Q96JQ0 3298 aa18.18■□□□□ 0.5
VIM-205ENST00000485947 MTMR11A4FU01 709 aa18.18■□□□□ 0.5
VIM-205ENST00000485947 LRRIQ3A6PVS8 624 aaPredicted RBP18.18■□□□□ 0.5
VIM-205ENST00000485947 ITGB3P05106 788 aa18.18■□□□□ 0.5
VIM-205ENST00000485947 TMEM191BP0C7N4 346 aa18.18■□□□□ 0.5
VIM-205ENST00000485947 TRIM49P0CI25 452 aa18.18■□□□□ 0.5
VIM-205ENST00000485947 TRIM49CP0CI26 452 aa18.18■□□□□ 0.5
VIM-205ENST00000485947 VCPP55072 806 aaKnown RBP18.18■□□□□ 0.5
VIM-205ENST00000485947 CLDN10P78369 228 aa18.18■□□□□ 0.5
VIM-205ENST00000485947 TCF15Q12870 199 aa18.18■□□□□ 0.5
VIM-205ENST00000485947 MYO1EQ12965 1108 aa18.18■□□□□ 0.5
VIM-205ENST00000485947 DUSP4Q13115 394 aa18.18■□□□□ 0.5
VIM-205ENST00000485947 PARM1Q6UWI2 310 aa18.18■□□□□ 0.5
VIM-205ENST00000485947 GBP6Q6ZN66 633 aa18.18■□□□□ 0.5
VIM-205ENST00000485947 WDR49Q8IV35 697 aa18.18■□□□□ 0.5
VIM-205ENST00000485947 SIX5Q8N196 739 aa18.18■□□□□ 0.5
VIM-205ENST00000485947 CCDC150Q8NCX0 1101 aa18.18■□□□□ 0.5
VIM-205ENST00000485947 SPPL2BQ8TCT7 592 aa18.18■□□□□ 0.5
VIM-205ENST00000485947 PLEKHO2Q8TD55 490 aa18.18■□□□□ 0.5
VIM-205ENST00000485947 FGF14Q92915 247 aa18.18■□□□□ 0.5
VIM-205ENST00000485947 E2F7Q96AV8 911 aa18.18■□□□□ 0.5
VIM-205ENST00000485947 ELSPBP1Q96BH3 223 aa18.18■□□□□ 0.5
VIM-205ENST00000485947 CGRRF1Q99675 332 aa18.18■□□□□ 0.5
VIM-205ENST00000485947 PDE11AQ9HCR9 933 aa18.18■□□□□ 0.5
VIM-205ENST00000485947 CEP72Q9P209 647 aa18.18■□□□□ 0.5
VIM-205ENST00000485947 ZMYM5Q9UJ78 669 aa18.18■□□□□ 0.5
VIM-205ENST00000485947 AGAP1Q9UPQ3 857 aa18.18■□□□□ 0.5
VIM-205ENST00000485947 DAAM1Q9Y4D1 1078 aa18.18■□□□□ 0.5
VIM-205ENST00000485947 FAM186AA6NE01 2351 aa18.18■□□□□ 0.5
VIM-205ENST00000485947 MYO15AQ9UKN7 3530 aa18.18■□□□□ 0.5
VIM-205ENST00000485947 GALR2O43603 387 aaPredicted RBP18.17■□□□□ 0.5
VIM-205ENST00000485947 NARSO43776 548 aaKnown RBP18.17■□□□□ 0.5
VIM-205ENST00000485947 HUS1O60921 280 aa18.17■□□□□ 0.5
VIM-205ENST00000485947 VNN2O95498 520 aa18.17■□□□□ 0.5
VIM-205ENST00000485947 PDGFBP01127 241 aaPredicted RBP18.17■□□□□ 0.5
VIM-205ENST00000485947 TNNC2P02585 160 aa18.17■□□□□ 0.5
VIM-205ENST00000485947 FAM163BP0C2L3 166 aa18.17■□□□□ 0.5
VIM-205ENST00000485947 POLR2BP30876 1174 aaKnown RBP18.17■□□□□ 0.5
VIM-205ENST00000485947 MXI1P50539 228 aa18.17■□□□□ 0.5
VIM-205ENST00000485947 AP3M2P53677 418 aa18.17■□□□□ 0.5
VIM-205ENST00000485947 DLG4P78352 724 aa18.17■□□□□ 0.5
VIM-205ENST00000485947 MYL7Q01449 175 aa18.17■□□□□ 0.5
VIM-205ENST00000485947 NFE2Q16621 373 aaPredicted RBP18.17■□□□□ 0.5
VIM-205ENST00000485947 EXOC3L4Q17RC7 722 aa18.17■□□□□ 0.5
VIM-205ENST00000485947 SLC5A9Q2M3M2 681 aa18.17■□□□□ 0.5
VIM-205ENST00000485947 C1orf220Q5T0J3 134 aa18.17■□□□□ 0.5
VIM-205ENST00000485947 TOP6BLQ8N6T0 577 aa18.17■□□□□ 0.5
VIM-205ENST00000485947 CXorf38Q8TB03 319 aa18.17■□□□□ 0.5
VIM-205ENST00000485947 PCMTD1Q96MG8 357 aaPredicted RBP18.17■□□□□ 0.5
VIM-205ENST00000485947 ACBD6Q9BR61 282 aa18.17■□□□□ 0.5
VIM-205ENST00000485947 TRPV4Q9HBA0 871 aa18.17■□□□□ 0.5
VIM-205ENST00000485947 TMEM8AQ9HCN3 771 aa18.17■□□□□ 0.5
VIM-205ENST00000485947 KMT2EQ8IZD2 1858 aa18.17■□□□□ 0.5
VIM-205ENST00000485947 CFHP08603 1231 aa18.16■□□□□ 0.5
VIM-205ENST00000485947 NPR3P17342 541 aa18.16■□□□□ 0.5
VIM-205ENST00000485947 LHX1P48742 406 aa18.16■□□□□ 0.5
VIM-205ENST00000485947 TSPY1Q01534 308 aa18.16■□□□□ 0.5
VIM-205ENST00000485947 PRKCQQ04759 706 aa18.16■□□□□ 0.5
VIM-205ENST00000485947 PPP3CAQ08209 521 aa18.16■□□□□ 0.5
VIM-205ENST00000485947 KCNMA1Q12791 1236 aa18.16■□□□□ 0.5
VIM-205ENST00000485947 VEPH1Q14D04 833 aa18.16■□□□□ 0.5
VIM-205ENST00000485947 HS1BP3Q53T59 392 aa18.16■□□□□ 0.5
VIM-205ENST00000485947 WSCD1Q658N2 575 aa18.16■□□□□ 0.5
VIM-205ENST00000485947 KRT39Q6A163 491 aa18.16■□□□□ 0.5
VIM-205ENST00000485947 CCDC186Q7Z3E2 898 aa18.16■□□□□ 0.5
VIM-205ENST00000485947 TMEM130Q8N3G9 435 aa18.16■□□□□ 0.5
VIM-205ENST00000485947 OR10T2Q8NGX3 314 aa18.16■□□□□ 0.5
VIM-205ENST00000485947 GPR152Q8TDT2 470 aa18.16■□□□□ 0.5
VIM-205ENST00000485947 PSMG2Q969U7 264 aa18.16■□□□□ 0.5
VIM-205ENST00000485947 CCDC127Q96BQ5 260 aa18.16■□□□□ 0.5
VIM-205ENST00000485947 EDEM3Q9BZQ6 932 aa18.16■□□□□ 0.5
VIM-205ENST00000485947 ZFP14Q9HCL3 533 aa18.16■□□□□ 0.5
VIM-205ENST00000485947 ABCB6Q9NP58 842 aa18.16■□□□□ 0.5
VIM-205ENST00000485947 PLCB1Q9NQ66 1216 aa18.16■□□□□ 0.5
VIM-205ENST00000485947 ARHGEF3Q9NR81 526 aa18.16■□□□□ 0.5
VIM-205ENST00000485947 A0A1W2PQJ5 194 aa18.15■□□□□ 0.5
VIM-205ENST00000485947 GFRA3O60609 400 aa18.15■□□□□ 0.5
VIM-205ENST00000485947 OR4Q2P0C623 313 aa18.15■□□□□ 0.5
VIM-205ENST00000485947 DLATP10515 647 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms