RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 ADSSL1Q8N142 457 aa19.67■□□□□ 0.74
COL1A1-206ENST00000485870 FUBP3Q96I24 572 aaKnown RBP eCLIP19.67■□□□□ 0.74
COL1A1-206ENST00000485870 GTPBP4Q9BZE4 634 aaKnown RBP19.67■□□□□ 0.74
COL1A1-206ENST00000485870 GPR88Q9GZN0 384 aa19.67■□□□□ 0.74
COL1A1-206ENST00000485870 DPEP3Q9H4B8 488 aa19.67■□□□□ 0.74
COL1A1-206ENST00000485870 IL21Q9HBE4 155 aa19.67■□□□□ 0.74
COL1A1-206ENST00000485870 ARHGEF3Q9NR81 526 aa19.67■□□□□ 0.74
COL1A1-206ENST00000485870 TRIM49BA6NDI0 452 aa19.66■□□□□ 0.74
COL1A1-206ENST00000485870 FAM163BP0C2L3 166 aa19.66■□□□□ 0.74
COL1A1-206ENST00000485870 CSH1P0DML2 217 aa19.66■□□□□ 0.74
COL1A1-206ENST00000485870 CSH2P0DML3 217 aa19.66■□□□□ 0.74
COL1A1-206ENST00000485870 HMGA1P17096 107 aaKnown RBP19.66■□□□□ 0.74
COL1A1-206ENST00000485870 BDNFP23560 247 aa19.66■□□□□ 0.74
COL1A1-206ENST00000485870 CDC25CP30307 473 aa19.66■□□□□ 0.74
COL1A1-206ENST00000485870 PMS1P54277 932 aaKnown RBP19.66■□□□□ 0.74
COL1A1-206ENST00000485870 SGSM1Q2NKQ1 1148 aa19.66■□□□□ 0.74
COL1A1-206ENST00000485870 ANKRD40Q6AI12 368 aa19.66■□□□□ 0.74
COL1A1-206ENST00000485870 SPOPLQ6IQ16 392 aa19.66■□□□□ 0.74
COL1A1-206ENST00000485870 GPIHBP1Q8IV16 184 aa19.66■□□□□ 0.74
COL1A1-206ENST00000485870 TMEM105Q8N8V8 129 aa19.66■□□□□ 0.74
COL1A1-206ENST00000485870 PCED1BQ96HM7 432 aa19.66■□□□□ 0.74
COL1A1-206ENST00000485870 PTPRDP23468 1912 aa19.65■□□□□ 0.74
COL1A1-206ENST00000485870 SLC38A8A6NNN8 435 aa19.65■□□□□ 0.74
COL1A1-206ENST00000485870 EPB41P11171 864 aaKnown RBP19.65■□□□□ 0.74
COL1A1-206ENST00000485870 P4HA1P13674 534 aa19.65■□□□□ 0.74
COL1A1-206ENST00000485870 PTPN1P18031 435 aaKnown RBP19.65■□□□□ 0.74
COL1A1-206ENST00000485870 MAGEA11P43364 429 aa19.65■□□□□ 0.74
COL1A1-206ENST00000485870 UBE2HP62256 183 aa19.65■□□□□ 0.74
COL1A1-206ENST00000485870 STIM1Q13586 685 aa19.65■□□□□ 0.74
COL1A1-206ENST00000485870 VITQ6UXI7 678 aa19.65■□□□□ 0.74
COL1A1-206ENST00000485870 MYCBPAPQ8TBZ2 947 aa19.65■□□□□ 0.74
COL1A1-206ENST00000485870 TAF4BQ92750 862 aa19.65■□□□□ 0.74
COL1A1-206ENST00000485870 MKNK1Q9BUB5 465 aa19.65■□□□□ 0.74
COL1A1-206ENST00000485870 SDCBP2Q9H190 292 aa19.65■□□□□ 0.74
COL1A1-206ENST00000485870 TBC1D17Q9HA65 648 aa19.65■□□□□ 0.74
COL1A1-206ENST00000485870 TRPV4Q9HBA0 871 aa19.65■□□□□ 0.74
COL1A1-206ENST00000485870 ARIH1Q9Y4X5 557 aaPredicted RBP19.65■□□□□ 0.74
COL1A1-206ENST00000485870 NCANO14594 1321 aa19.65■□□□□ 0.74
COL1A1-206ENST00000485870 HEPACAM2A8MVW5 462 aa19.64■□□□□ 0.73
COL1A1-206ENST00000485870 BIN1O00499 593 aa19.64■□□□□ 0.73
COL1A1-206ENST00000485870 PSMA7O14818 248 aa19.64■□□□□ 0.73
COL1A1-206ENST00000485870 ASS1P00966 412 aaKnown RBP19.64■□□□□ 0.73
COL1A1-206ENST00000485870 CLCN5P51795 746 aa19.64■□□□□ 0.73
COL1A1-206ENST00000485870 NLRP12P59046 1061 aa19.64■□□□□ 0.73
COL1A1-206ENST00000485870 PFKPQ01813 784 aa19.64■□□□□ 0.73
COL1A1-206ENST00000485870 ARID3BQ8IVW6 561 aaPredicted RBP19.64■□□□□ 0.73
COL1A1-206ENST00000485870 B3GALNT2Q8NCR0 500 aa19.64■□□□□ 0.73
COL1A1-206ENST00000485870 PRSS33Q8NF86 280 aa19.64■□□□□ 0.73
COL1A1-206ENST00000485870 TAS1R2Q8TE23 839 aa19.64■□□□□ 0.73
COL1A1-206ENST00000485870 KCNH6Q9H252 994 aa19.64■□□□□ 0.73
COL1A1-206ENST00000485870 DENND4CQ5VZ89 1909 aa19.63■□□□□ 0.73
COL1A1-206ENST00000485870 NUP210Q8TEM1 1887 aaPredicted RBP19.63■□□□□ 0.73
COL1A1-206ENST00000485870 COL4A3Q01955 1670 aa19.63■□□□□ 0.73
COL1A1-206ENST00000485870 PI15O43692 258 aa19.63■□□□□ 0.73
COL1A1-206ENST00000485870 NOL4O94818 638 aa19.63■□□□□ 0.73
COL1A1-206ENST00000485870 F11P03951 625 aa19.63■□□□□ 0.73
COL1A1-206ENST00000485870 CD44P16070 742 aaKnown RBP19.63■□□□□ 0.73
COL1A1-206ENST00000485870 PSMC3P17980 439 aa19.63■□□□□ 0.73
COL1A1-206ENST00000485870 AOC1P19801 751 aa19.63■□□□□ 0.73
COL1A1-206ENST00000485870 CCNE1P24864 410 aa19.63■□□□□ 0.73
COL1A1-206ENST00000485870 GRIK1P39086 918 aa19.63■□□□□ 0.73
COL1A1-206ENST00000485870 FKBP3Q00688 224 aaKnown RBP19.63■□□□□ 0.73
COL1A1-206ENST00000485870 LRRC63Q05C16 580 aa19.63■□□□□ 0.73
COL1A1-206ENST00000485870 ENPEPQ07075 957 aa19.63■□□□□ 0.73
COL1A1-206ENST00000485870 SLC44A4Q53GD3 710 aa19.63■□□□□ 0.73
COL1A1-206ENST00000485870 KLHL10Q6JEL2 608 aa19.63■□□□□ 0.73
COL1A1-206ENST00000485870 VSTM1Q6UX27 236 aa19.63■□□□□ 0.73
COL1A1-206ENST00000485870 TMEM150AQ86TG1 271 aa19.63■□□□□ 0.73
COL1A1-206ENST00000485870 DEPDC1BQ8WUY9 529 aa19.63■□□□□ 0.73
COL1A1-206ENST00000485870 RSPRY1Q96DX4 576 aa19.63■□□□□ 0.73
COL1A1-206ENST00000485870 TRMT61BQ9BVS5 477 aaKnown RBP19.63■□□□□ 0.73
COL1A1-206ENST00000485870 IMPG2Q9BZV3 1241 aa19.63■□□□□ 0.73
COL1A1-206ENST00000485870 TASP1Q9H6P5 420 aa19.63■□□□□ 0.73
COL1A1-206ENST00000485870 BRD9Q9H8M2 597 aa19.63■□□□□ 0.73
COL1A1-206ENST00000485870 TMEM8AQ9HCN3 771 aa19.63■□□□□ 0.73
COL1A1-206ENST00000485870 UXTQ9UBK9 157 aaPredicted RBP19.63■□□□□ 0.73
COL1A1-206ENST00000485870 OBSL1O75147 1896 aa19.62■□□□□ 0.73
COL1A1-206ENST00000485870 CLDN5O00501 218 aa19.62■□□□□ 0.73
COL1A1-206ENST00000485870 DPYSL4O14531 572 aa19.62■□□□□ 0.73
COL1A1-206ENST00000485870 SLC16A3O15427 465 aaKnown RBP19.62■□□□□ 0.73
COL1A1-206ENST00000485870 BMP6P22004 513 aa19.62■□□□□ 0.73
COL1A1-206ENST00000485870 ANXA13P27216 316 aa19.62■□□□□ 0.73
COL1A1-206ENST00000485870 GDI1P31150 447 aa19.62■□□□□ 0.73
COL1A1-206ENST00000485870 GTF2H1P32780 548 aa19.62■□□□□ 0.73
COL1A1-206ENST00000485870 ASPAP45381 313 aa19.62■□□□□ 0.73
COL1A1-206ENST00000485870 NOP14P78316 857 aaKnown RBP19.62■□□□□ 0.73
COL1A1-206ENST00000485870 ORC1Q13415 861 aa19.62■□□□□ 0.73
COL1A1-206ENST00000485870 MORC3Q14149 939 aa19.62■□□□□ 0.73
COL1A1-206ENST00000485870 MLF2Q15773 248 aaPredicted RBP19.62■□□□□ 0.73
COL1A1-206ENST00000485870 DCAF17Q5H9S7 520 aaPredicted RBP19.62■□□□□ 0.73
COL1A1-206ENST00000485870 TCERG1LQ5VWI1 586 aa19.62■□□□□ 0.73
COL1A1-206ENST00000485870 KRT39Q6A163 491 aa19.62■□□□□ 0.73
COL1A1-206ENST00000485870 ZC3H3Q8IXZ2 948 aaKnown RBP19.62■□□□□ 0.73
COL1A1-206ENST00000485870 FAM122AQ96E09 287 aa19.62■□□□□ 0.73
COL1A1-206ENST00000485870 DHTKD1Q96HY7 919 aaPredicted RBP19.62■□□□□ 0.73
COL1A1-206ENST00000485870 SLC46A2Q9BY10 475 aa19.62■□□□□ 0.73
COL1A1-206ENST00000485870 B3GNT5Q9BYG0 378 aa19.62■□□□□ 0.73
COL1A1-206ENST00000485870 ZNF518BQ9C0D4 1074 aa19.62■□□□□ 0.73
COL1A1-206ENST00000485870 SMG9Q9H0W8 520 aaKnown RBP19.62■□□□□ 0.73
COL1A1-206ENST00000485870 APOBEC3GQ9HC16 384 aaKnown RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms