RNA–Protein interactions for RNA: ENST00000485541.1

SRRM1-214, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-214ENST00000485541 HOXD10P28358 340 aa8.34□□□□□ -1.07
SRRM1-214ENST00000485541 RDXP35241 583 aaKnown RBP8.34□□□□□ -1.07
SRRM1-214ENST00000485541 PSMC4P43686 418 aa8.34□□□□□ -1.07
SRRM1-214ENST00000485541 ACADSBP45954 432 aa8.34□□□□□ -1.07
SRRM1-214ENST00000485541 RPL34P49207 117 aaKnown RBP8.34□□□□□ -1.07
SRRM1-214ENST00000485541 NDST1P52848 882 aa8.34□□□□□ -1.07
SRRM1-214ENST00000485541 PSMC1P62191 440 aaKnown RBP8.34□□□□□ -1.07
SRRM1-214ENST00000485541 NFX1Q12986 1120 aaKnown RBP8.34□□□□□ -1.07
SRRM1-214ENST00000485541 CALCOCO2Q13137 446 aa8.34□□□□□ -1.07
SRRM1-214ENST00000485541 PDCLQ13371 301 aa8.34□□□□□ -1.07
SRRM1-214ENST00000485541 PTK6Q13882 451 aa8.34□□□□□ -1.07
SRRM1-214ENST00000485541 PKDCCQ504Y2 493 aa8.34□□□□□ -1.07
SRRM1-214ENST00000485541 ODF2Q5BJF6 829 aa8.34□□□□□ -1.07
SRRM1-214ENST00000485541 TFDP3Q5H9I0 405 aa8.34□□□□□ -1.07
SRRM1-214ENST00000485541 UBXN11Q5T124 520 aa8.34□□□□□ -1.07
SRRM1-214ENST00000485541 EMC10Q5UCC4 262 aa8.34□□□□□ -1.07
SRRM1-214ENST00000485541 TMC3Q7Z5M5 1100 aa8.34□□□□□ -1.07
SRRM1-214ENST00000485541 SERINC5Q86VE9 423 aa8.34□□□□□ -1.07
SRRM1-214ENST00000485541 XYLT1Q86Y38 959 aa8.34□□□□□ -1.07
SRRM1-214ENST00000485541 CRYBG2Q8N1P7 616 aa8.34□□□□□ -1.07
SRRM1-214ENST00000485541 CCDC89Q8N998 374 aa8.34□□□□□ -1.07
SRRM1-214ENST00000485541 ELMO3Q96BJ8 720 aa8.34□□□□□ -1.07
SRRM1-214ENST00000485541 BTBD6Q96KE9 485 aa8.34□□□□□ -1.07
SRRM1-214ENST00000485541 TNIP3Q96KP6 325 aa8.34□□□□□ -1.07
SRRM1-214ENST00000485541 MCEEQ96PE7 176 aa8.34□□□□□ -1.07
SRRM1-214ENST00000485541 TBCBQ99426 244 aa8.34□□□□□ -1.07
SRRM1-214ENST00000485541 TXLNGYQ9BZA5 131 aa8.34□□□□□ -1.07
SRRM1-214ENST00000485541 DCLK3Q9C098 648 aa8.34□□□□□ -1.07
SRRM1-214ENST00000485541 PHACTR1Q9C0D0 580 aa8.34□□□□□ -1.07
SRRM1-214ENST00000485541 SYNCQ9H7C4 482 aa8.34□□□□□ -1.07
SRRM1-214ENST00000485541 PRDM16Q9HAZ2 1276 aa8.34□□□□□ -1.07
SRRM1-214ENST00000485541 ZDHHC18Q9NUE0 388 aa8.34□□□□□ -1.07
SRRM1-214ENST00000485541 ASNSD1Q9NWL6 643 aa8.34□□□□□ -1.07
SRRM1-214ENST00000485541 HESX1Q9UBX0 185 aa8.34□□□□□ -1.07
SRRM1-214ENST00000485541 DRG1Q9Y295 367 aaKnown RBP8.34□□□□□ -1.07
SRRM1-214ENST00000485541 SMIM28A0A1B0GU29 152 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 ESYT3A0FGR9 886 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 ARHGEF37A1IGU5 675 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 ZSCAN5CA6NGD5 496 aaPredicted RBP8.33□□□□□ -1.08
SRRM1-214ENST00000485541 SRRM3A6NNA2 597 aaPredicted RBP8.33□□□□□ -1.08
SRRM1-214ENST00000485541 HMGB1P1B2RPK0 211 aaPredicted RBP8.33□□□□□ -1.08
SRRM1-214ENST00000485541 M0QYV0 167 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 GPR182O15218 404 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 DAPK3O43293 454 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 ADAMTS4O75173 837 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 CSDE1O75534 798 aaKnown RBP8.33□□□□□ -1.08
SRRM1-214ENST00000485541 ZNF189O75820 626 aaPredicted RBP8.33□□□□□ -1.08
SRRM1-214ENST00000485541 CFHP08603 1231 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 NUDT17P0C025 328 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 WARSP23381 471 aaKnown RBP8.33□□□□□ -1.08
SRRM1-214ENST00000485541 PSMA2P25787 234 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 GGCXP38435 758 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 RAP1GAPP47736 663 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 ZNF143P52747 638 aaPredicted RBP8.33□□□□□ -1.08
SRRM1-214ENST00000485541 BCAT1P54687 386 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 TAS2R40P59535 323 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 RPL7AP62424 266 aaKnown RBP8.33□□□□□ -1.08
SRRM1-214ENST00000485541 ZNF252P-AS1Q0IIN9 211 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 PPP1R7Q15435 360 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 TAZQ16635 292 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 PTPROQ16827 1216 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 ZNF394Q53GI3 561 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 GNASQ5JWF2 1037 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 DENND1BQ6P3S1 775 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 TMEM110Q86TL2 294 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 FAM228AQ86W67 206 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 NLRC5Q86WI3 1866 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 CCDC50Q8IVM0 306 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 GSPT2Q8IYD1 628 aaKnown RBP8.33□□□□□ -1.08
SRRM1-214ENST00000485541 TMEM86AQ8N2M4 240 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 ARFGAP2Q8N6H7 521 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 KLHDC9Q8NEP7 349 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 FAM76AQ8TAV0 307 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 TRIB2Q92519 343 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 ART4Q93070 314 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 HSFY1Q96LI6 401 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 HEXIM2Q96MH2 286 aaKnown RBP8.33□□□□□ -1.08
SRRM1-214ENST00000485541 ZIM3Q96PE6 472 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 SLITRK1Q96PX8 696 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 TWNKQ96RR1 684 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 CPXM1Q96SM3 734 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 PPP1R16BQ96T49 567 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 CNPY3Q9BT09 278 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 TMEM109Q9BVC6 243 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 SLC4A5Q9BY07 1137 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 EIF2AQ9BY44 585 aaKnown RBP8.33□□□□□ -1.08
SRRM1-214ENST00000485541 NXF3Q9H4D5 531 aaKnown RBP8.33□□□□□ -1.08
SRRM1-214ENST00000485541 UBN1Q9NPG3 1134 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 ADAM21Q9UKJ8 722 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 TSPAN16Q9UKR8 245 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 ABT1Q9ULW3 272 aaKnown RBP8.33□□□□□ -1.08
SRRM1-214ENST00000485541 GIT1Q9Y2X7 761 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 NR2E1Q9Y466 385 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 IPPQ9Y573 584 aa8.33□□□□□ -1.08
SRRM1-214ENST00000485541 TANC1Q9C0D5 1861 aa8.32□□□□□ -1.08
SRRM1-214ENST00000485541 hCG_1818297A0A087WSY0 165 aa8.32□□□□□ -1.08
SRRM1-214ENST00000485541 GOLGA6CA6NDK9 693 aa8.32□□□□□ -1.08
SRRM1-214ENST00000485541 KPNA7A9QM74 516 aa8.32□□□□□ -1.08
SRRM1-214ENST00000485541 HUS1O60921 280 aa8.32□□□□□ -1.08
SRRM1-214ENST00000485541 ZNF623O75123 536 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms