RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 TTC30AQ86WT1 665 aa21.66■■□□□ 1.06
VCPKMT-203ENST00000484763 ANKRD52Q8NB46 1076 aa21.66■■□□□ 1.06
VCPKMT-203ENST00000484763 UBA3Q8TBC4 463 aa21.66■■□□□ 1.06
VCPKMT-203ENST00000484763 RFFLQ8WZ73 363 aa21.66■■□□□ 1.06
VCPKMT-203ENST00000484763 TMEM169Q96HH4 297 aa21.66■■□□□ 1.06
VCPKMT-203ENST00000484763 VCPIP1Q96JH7 1222 aa21.66■■□□□ 1.06
VCPKMT-203ENST00000484763 RAD9AQ99638 391 aa21.66■■□□□ 1.06
VCPKMT-203ENST00000484763 C11orf70Q9BRQ4 267 aa21.66■■□□□ 1.06
VCPKMT-203ENST00000484763 AAASQ9NRG9 546 aa21.66■■□□□ 1.06
VCPKMT-203ENST00000484763 MYO1AQ9UBC5 1043 aa21.66■■□□□ 1.06
VCPKMT-203ENST00000484763 MYBPHLA2RUH7 354 aa21.65■■□□□ 1.06
VCPKMT-203ENST00000484763 SETSIPP0DME0 302 aa21.65■■□□□ 1.06
VCPKMT-203ENST00000484763 MMP8P22894 467 aa21.65■■□□□ 1.06
VCPKMT-203ENST00000484763 MAPRE1Q15691 268 aaKnown RBP21.65■■□□□ 1.06
VCPKMT-203ENST00000484763 MMS22LQ6ZRQ5 1243 aa21.65■■□□□ 1.06
VCPKMT-203ENST00000484763 ERICH1Q86X53 443 aa21.65■■□□□ 1.06
VCPKMT-203ENST00000484763 FUKQ8N0W3 1084 aa21.65■■□□□ 1.06
VCPKMT-203ENST00000484763 RNF10Q8N5U6 811 aaKnown RBP21.65■■□□□ 1.06
VCPKMT-203ENST00000484763 MSANTD4Q8NCY6 345 aa21.65■■□□□ 1.06
VCPKMT-203ENST00000484763 ARHGEF26Q96DR7 871 aa21.65■■□□□ 1.06
VCPKMT-203ENST00000484763 TTPALQ9BTX7 342 aa21.65■■□□□ 1.06
VCPKMT-203ENST00000484763 CYTH4Q9UIA0 394 aa21.65■■□□□ 1.06
VCPKMT-203ENST00000484763 KIF2AO00139 706 aaPredicted RBP21.64■■□□□ 1.06
VCPKMT-203ENST00000484763 TLL1O43897 1013 aa21.64■■□□□ 1.06
VCPKMT-203ENST00000484763 CALB1P05937 261 aa21.64■■□□□ 1.06
VCPKMT-203ENST00000484763 PPM1AP35813 382 aa21.64■■□□□ 1.06
VCPKMT-203ENST00000484763 MAGEA10P43363 369 aaPredicted RBP21.64■■□□□ 1.06
VCPKMT-203ENST00000484763 PLCB3Q01970 1234 aa21.64■■□□□ 1.06
VCPKMT-203ENST00000484763 BST2Q10589 180 aaKnown RBP21.64■■□□□ 1.06
VCPKMT-203ENST00000484763 PDCLQ13371 301 aa21.64■■□□□ 1.06
VCPKMT-203ENST00000484763 MRPL58Q14197 206 aaKnown RBP21.64■■□□□ 1.06
VCPKMT-203ENST00000484763 FAM171BQ6P995 826 aa21.64■■□□□ 1.06
VCPKMT-203ENST00000484763 RHOT2Q8IXI1 618 aa21.64■■□□□ 1.06
VCPKMT-203ENST00000484763 RNF168Q8IYW5 571 aaPredicted RBP21.64■■□□□ 1.06
VCPKMT-203ENST00000484763 SP7Q8TDD2 431 aaPredicted RBP21.64■■□□□ 1.06
VCPKMT-203ENST00000484763 PCED1BQ96HM7 432 aa21.64■■□□□ 1.06
VCPKMT-203ENST00000484763 PKMYT1Q99640 499 aa21.64■■□□□ 1.06
VCPKMT-203ENST00000484763 MED10Q9BTT4 135 aa21.64■■□□□ 1.06
VCPKMT-203ENST00000484763 IRX2Q9BZI1 471 aaPredicted RBP21.64■■□□□ 1.06
VCPKMT-203ENST00000484763 SPG21Q9NZD8 308 aa21.64■■□□□ 1.06
VCPKMT-203ENST00000484763 SALL4Q9UJQ4 1053 aa21.64■■□□□ 1.06
VCPKMT-203ENST00000484763 MYH10P35580 1976 aa21.64■■□□□ 1.05
VCPKMT-203ENST00000484763 CYP1A2P05177 515 aa21.64■■□□□ 1.05
VCPKMT-203ENST00000484763 PTP4A2Q12974 167 aa21.64■■□□□ 1.05
VCPKMT-203ENST00000484763 USP41Q3LFD5 358 aa21.64■■□□□ 1.05
VCPKMT-203ENST00000484763 RTP2Q5QGT7 225 aa21.64■■□□□ 1.05
VCPKMT-203ENST00000484763 LIN9Q5TKA1 542 aa21.64■■□□□ 1.05
VCPKMT-203ENST00000484763 MYLPFQ96A32 169 aa21.64■■□□□ 1.05
VCPKMT-203ENST00000484763 B3GALT6Q96L58 329 aa21.64■■□□□ 1.05
VCPKMT-203ENST00000484763 B3GNT5Q9BYG0 378 aa21.64■■□□□ 1.05
VCPKMT-203ENST00000484763 AVENQ9NQS1 362 aaPredicted RBP21.64■■□□□ 1.05
VCPKMT-203ENST00000484763 CNOT8Q9UFF9 292 aaKnown RBP21.64■■□□□ 1.05
VCPKMT-203ENST00000484763 PAXBP1Q9Y5B6 917 aa21.64■■□□□ 1.05
VCPKMT-203ENST00000484763 PCDHB12Q9Y5F1 795 aa21.64■■□□□ 1.05
VCPKMT-203ENST00000484763 NLRC5Q86WI3 1866 aa21.63■■□□□ 1.05
VCPKMT-203ENST00000484763 ATMINO43313 823 aaPredicted RBP21.63■■□□□ 1.05
VCPKMT-203ENST00000484763 CAPN15O75808 1086 aa21.63■■□□□ 1.05
VCPKMT-203ENST00000484763 TUBB4AP04350 444 aa21.63■■□□□ 1.05
VCPKMT-203ENST00000484763 NAP1L1P55209 391 aaKnown RBP21.63■■□□□ 1.05
VCPKMT-203ENST00000484763 SLC8A3P57103 927 aa21.63■■□□□ 1.05
VCPKMT-203ENST00000484763 PTPN20Q4JDL3 420 aa21.63■■□□□ 1.05
VCPKMT-203ENST00000484763 CTXN3Q4LDR2 81 aa21.63■■□□□ 1.05
VCPKMT-203ENST00000484763 ANKS3Q6ZW76 656 aa21.63■■□□□ 1.05
VCPKMT-203ENST00000484763 FAM35AQ86V20 835 aa21.63■■□□□ 1.05
VCPKMT-203ENST00000484763 CLP1Q92989 425 aaKnown RBP21.63■■□□□ 1.05
VCPKMT-203ENST00000484763 TMEM209Q96SK2 561 aa21.63■■□□□ 1.05
VCPKMT-203ENST00000484763 VN1R3Q9BXE9 311 aa21.63■■□□□ 1.05
VCPKMT-203ENST00000484763 ZCWPW1Q9H0M4 648 aa21.63■■□□□ 1.05
VCPKMT-203ENST00000484763 STRIP2Q9ULQ0 834 aa21.63■■□□□ 1.05
VCPKMT-203ENST00000484763 PTPRDP23468 1912 aa21.63■■□□□ 1.05
VCPKMT-203ENST00000484763 OR6C75A6NL08 312 aa21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 H7C4K7 107 aa21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 BUB1O43683 1085 aa21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 MOCS3O95396 460 aa21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 GNG11P61952 73 aa21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 ETF1P62495 437 aaKnown RBP21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 PDE4CQ08493 712 aa21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 IFI16Q16666 785 aaKnown RBP21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 C2CD6Q53TS8 623 aa21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 PAQR9Q6ZVX9 377 aa21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 TAS1R1Q7RTX1 841 aa21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 DCP1BQ8IZD4 617 aaKnown RBP21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 SLC35G2Q8TBE7 412 aa21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 IPO4Q8TEX9 1081 aaKnown RBP21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 CPXM1Q96SM3 734 aa21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 DUSP16Q9BY84 665 aa21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 OXCT2Q9BYC2 517 aaPredicted RBP21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 SYNCQ9H7C4 482 aa21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 KRT82Q9NSB4 513 aa21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 CTTNBP2NLQ9P2B4 639 aa21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 CLDN5O00501 218 aa21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 SOD2P04179 222 aa21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 FAM200BP0CF97 657 aa21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 TNNT1P13805 278 aa21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 NPR3P17342 541 aa21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 RRM1P23921 792 aa21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 NOP2P46087 812 aaKnown RBP21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 TCEAL1Q15170 157 aa21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 C9orf50Q5SZB4 431 aa21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 STK32AQ8WU08 396 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms