RNA–Protein interactions for RNA: ENST00000484254.1

CNTNAP3B-208, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 742 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-208ENST00000484254 DPEP3Q9H4B8 488 aa23.64■■□□□ 1.37
CNTNAP3B-208ENST00000484254 SRFP11831 508 aa23.63■■□□□ 1.37
CNTNAP3B-208ENST00000484254 ASPAP45381 313 aa23.63■■□□□ 1.37
CNTNAP3B-208ENST00000484254 MXI1P50539 228 aa23.63■■□□□ 1.37
CNTNAP3B-208ENST00000484254 CYP27A1Q02318 531 aa23.63■■□□□ 1.37
CNTNAP3B-208ENST00000484254 PAK1Q13153 545 aa23.63■■□□□ 1.37
CNTNAP3B-208ENST00000484254 DDR2Q16832 855 aa23.63■■□□□ 1.37
CNTNAP3B-208ENST00000484254 DCAF17Q5H9S7 520 aaPredicted RBP23.63■■□□□ 1.37
CNTNAP3B-208ENST00000484254 FRMD5Q7Z6J6 570 aa23.63■■□□□ 1.37
CNTNAP3B-208ENST00000484254 B3GALNT2Q8NCR0 500 aa23.63■■□□□ 1.37
CNTNAP3B-208ENST00000484254 PBXIP1Q96AQ6 731 aa23.63■■□□□ 1.37
CNTNAP3B-208ENST00000484254 PCED1BQ96HM7 432 aa23.63■■□□□ 1.37
CNTNAP3B-208ENST00000484254 ZSWIM3Q96MP5 696 aa23.63■■□□□ 1.37
CNTNAP3B-208ENST00000484254 KXD1Q9BQD3 176 aa23.63■■□□□ 1.37
CNTNAP3B-208ENST00000484254 METTL14Q9HCE5 456 aaKnown RBP23.63■■□□□ 1.37
CNTNAP3B-208ENST00000484254 ECI2O75521 394 aa23.62■■□□□ 1.37
CNTNAP3B-208ENST00000484254 CSH1P0DML2 217 aa23.62■■□□□ 1.37
CNTNAP3B-208ENST00000484254 CSH2P0DML3 217 aa23.62■■□□□ 1.37
CNTNAP3B-208ENST00000484254 HMGA1P17096 107 aaKnown RBP23.62■■□□□ 1.37
CNTNAP3B-208ENST00000484254 GABRR2P28476 465 aa23.62■■□□□ 1.37
CNTNAP3B-208ENST00000484254 NOP14P78316 857 aaKnown RBP23.62■■□□□ 1.37
CNTNAP3B-208ENST00000484254 FAM78AQ5JUQ0 283 aa23.62■■□□□ 1.37
CNTNAP3B-208ENST00000484254 SDHAF4Q5VUM1 108 aa23.62■■□□□ 1.37
CNTNAP3B-208ENST00000484254 TCERG1LQ5VWI1 586 aa23.62■■□□□ 1.37
CNTNAP3B-208ENST00000484254 VSTM1Q6UX27 236 aa23.62■■□□□ 1.37
CNTNAP3B-208ENST00000484254 CCDC150Q8NCX0 1101 aa23.62■■□□□ 1.37
CNTNAP3B-208ENST00000484254 FBXL13Q8NEE6 735 aa23.62■■□□□ 1.37
CNTNAP3B-208ENST00000484254 ASB16Q96NS5 453 aa23.62■■□□□ 1.37
CNTNAP3B-208ENST00000484254 BCO2Q9BYV7 579 aa23.62■■□□□ 1.37
CNTNAP3B-208ENST00000484254 ATXN3LQ9H3M9 355 aa23.62■■□□□ 1.37
CNTNAP3B-208ENST00000484254 IL21Q9HBE4 155 aa23.62■■□□□ 1.37
CNTNAP3B-208ENST00000484254 APOBEC3GQ9HC16 384 aaKnown RBP23.62■■□□□ 1.37
CNTNAP3B-208ENST00000484254 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.62■■□□□ 1.37
CNTNAP3B-208ENST00000484254 BDNFP23560 247 aa23.61■■□□□ 1.37
CNTNAP3B-208ENST00000484254 FCARP24071 287 aa23.61■■□□□ 1.37
CNTNAP3B-208ENST00000484254 CDC25CP30307 473 aa23.61■■□□□ 1.37
CNTNAP3B-208ENST00000484254 STX17P56962 302 aa23.61■■□□□ 1.37
CNTNAP3B-208ENST00000484254 SCN4BQ8IWT1 228 aa23.61■■□□□ 1.37
CNTNAP3B-208ENST00000484254 SEMA4DQ92854 862 aa23.61■■□□□ 1.37
CNTNAP3B-208ENST00000484254 SMARCD2Q92925 531 aa23.61■■□□□ 1.37
CNTNAP3B-208ENST00000484254 SLC35C1Q96A29 364 aa23.61■■□□□ 1.37
CNTNAP3B-208ENST00000484254 ELSPBP1Q96BH3 223 aa23.61■■□□□ 1.37
CNTNAP3B-208ENST00000484254 TNIP3Q96KP6 325 aa23.61■■□□□ 1.37
CNTNAP3B-208ENST00000484254 NIF3L1Q9GZT8 377 aa23.61■■□□□ 1.37
CNTNAP3B-208ENST00000484254 SLC2A4RGQ9NR83 387 aa23.61■■□□□ 1.37
CNTNAP3B-208ENST00000484254 RAB20Q9NX57 234 aa23.61■■□□□ 1.37
CNTNAP3B-208ENST00000484254 SLC38A8A6NNN8 435 aa23.6■■□□□ 1.37
CNTNAP3B-208ENST00000484254 LRRN2O75325 713 aa23.6■■□□□ 1.37
CNTNAP3B-208ENST00000484254 NOL4O94818 638 aa23.6■■□□□ 1.37
CNTNAP3B-208ENST00000484254 CCDC40Q4G0X9 1142 aa23.6■■□□□ 1.37
CNTNAP3B-208ENST00000484254 CBWD6Q4V339 395 aa23.6■■□□□ 1.37
CNTNAP3B-208ENST00000484254 CBWD3Q5JTY5 395 aa23.6■■□□□ 1.37
CNTNAP3B-208ENST00000484254 CBWD5Q5RIA9 395 aa23.6■■□□□ 1.37
CNTNAP3B-208ENST00000484254 TANGO2Q6ICL3 276 aa23.6■■□□□ 1.37
CNTNAP3B-208ENST00000484254 UNC93AQ86WB7 457 aa23.6■■□□□ 1.37
CNTNAP3B-208ENST00000484254 ZSCAN18Q8TBC5 510 aaPredicted RBP23.6■■□□□ 1.37
CNTNAP3B-208ENST00000484254 SPATA17Q96L03 361 aa23.6■■□□□ 1.37
CNTNAP3B-208ENST00000484254 CEP295NLQ96MC4 621 aa23.6■■□□□ 1.37
CNTNAP3B-208ENST00000484254 GCNAQ96QF7 691 aa23.6■■□□□ 1.37
CNTNAP3B-208ENST00000484254 NUP62CLQ9H1M0 184 aa23.6■■□□□ 1.37
CNTNAP3B-208ENST00000484254 SLITRK6Q9H5Y7 841 aa23.6■■□□□ 1.37
CNTNAP3B-208ENST00000484254 CYP3A43Q9HB55 503 aa23.6■■□□□ 1.37
CNTNAP3B-208ENST00000484254 TRPV4Q9HBA0 871 aa23.6■■□□□ 1.37
CNTNAP3B-208ENST00000484254 ZFP14Q9HCL3 533 aa23.6■■□□□ 1.37
CNTNAP3B-208ENST00000484254 WNT16Q9UBV4 365 aa23.6■■□□□ 1.37
CNTNAP3B-208ENST00000484254 PTPRDP23468 1912 aa23.6■■□□□ 1.37
CNTNAP3B-208ENST00000484254 GRIK1P39086 918 aa23.59■■□□□ 1.37
CNTNAP3B-208ENST00000484254 ARHGAP15Q53QZ3 475 aa23.59■■□□□ 1.37
CNTNAP3B-208ENST00000484254 STXBP5Q5T5C0 1151 aa23.59■■□□□ 1.37
CNTNAP3B-208ENST00000484254 STKLD1Q8NE28 680 aa23.59■■□□□ 1.37
CNTNAP3B-208ENST00000484254 TRMT2BQ96GJ1 504 aaKnown RBP23.59■■□□□ 1.37
CNTNAP3B-208ENST00000484254 FAXDC2Q96IV6 333 aa23.59■■□□□ 1.37
CNTNAP3B-208ENST00000484254 MYRFLQ96LU7 910 aa23.59■■□□□ 1.37
CNTNAP3B-208ENST00000484254 B3GNT5Q9BYG0 378 aa23.59■■□□□ 1.37
CNTNAP3B-208ENST00000484254 PLA2G2FQ9BZM2 168 aa23.59■■□□□ 1.37
CNTNAP3B-208ENST00000484254 ELOVL4Q9GZR5 314 aa23.59■■□□□ 1.37
CNTNAP3B-208ENST00000484254 RWDD2AQ9UIY3 292 aa23.59■■□□□ 1.37
CNTNAP3B-208ENST00000484254 FBXL21Q9UKT6 434 aa23.59■■□□□ 1.37
CNTNAP3B-208ENST00000484254 MAGED2Q9UNF1 606 aaPredicted RBP23.59■■□□□ 1.37
CNTNAP3B-208ENST00000484254 COQ4Q9Y3A0 265 aa23.59■■□□□ 1.37
CNTNAP3B-208ENST00000484254 TRIM66O15016 1216 aa23.58■■□□□ 1.37
CNTNAP3B-208ENST00000484254 F11P03951 625 aa23.58■■□□□ 1.37
CNTNAP3B-208ENST00000484254 CFHP08603 1231 aa23.58■■□□□ 1.37
CNTNAP3B-208ENST00000484254 NDST1P52848 882 aa23.58■■□□□ 1.37
CNTNAP3B-208ENST00000484254 NLRP12P59046 1061 aa23.58■■□□□ 1.37
CNTNAP3B-208ENST00000484254 GPC5P78333 572 aa23.58■■□□□ 1.37
CNTNAP3B-208ENST00000484254 INCA1Q0VD86 236 aa23.58■■□□□ 1.37
CNTNAP3B-208ENST00000484254 GPR158Q5T848 1215 aa23.58■■□□□ 1.37
CNTNAP3B-208ENST00000484254 TMEM150AQ86TG1 271 aa23.58■■□□□ 1.37
CNTNAP3B-208ENST00000484254 ACOT1Q86TX2 421 aa23.58■■□□□ 1.37
CNTNAP3B-208ENST00000484254 CRYBG2Q8N1P7 616 aa23.58■■□□□ 1.37
CNTNAP3B-208ENST00000484254 FBXL6Q8N531 539 aa23.58■■□□□ 1.37
CNTNAP3B-208ENST00000484254 MLKLQ8NB16 471 aa23.58■■□□□ 1.37
CNTNAP3B-208ENST00000484254 C8orf48Q96LL4 319 aa23.58■■□□□ 1.37
CNTNAP3B-208ENST00000484254 ZNF518BQ9C0D4 1074 aa23.58■■□□□ 1.37
CNTNAP3B-208ENST00000484254 UXTQ9UBK9 157 aaPredicted RBP23.58■■□□□ 1.37
CNTNAP3B-208ENST00000484254 GOLGA6L22H0YM25 854 aa23.57■■□□□ 1.36
CNTNAP3B-208ENST00000484254 GNA14O95837 355 aa23.57■■□□□ 1.36
CNTNAP3B-208ENST00000484254 PDGFBP01127 241 aaPredicted RBP23.57■■□□□ 1.36
CNTNAP3B-208ENST00000484254 COL9A1P20849 921 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms