RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 PARD6AQ9NPB6 346 aa19.34■□□□□ 0.69
ATG4B-221ENST00000483778 POLR3BQ9NW08 1133 aaPredicted RBP19.34■□□□□ 0.69
ATG4B-221ENST00000483778 HSPBP1Q9NZL4 362 aa19.34■□□□□ 0.69
ATG4B-221ENST00000483778 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.33■□□□□ 0.68
ATG4B-221ENST00000483778 MED19A0JLT2 244 aaPredicted RBP19.33■□□□□ 0.68
ATG4B-221ENST00000483778 ZNF233A6NK53 670 aa19.33■□□□□ 0.68
ATG4B-221ENST00000483778 CLIC2O15247 247 aa19.33■□□□□ 0.68
ATG4B-221ENST00000483778 CUTAO60888 179 aa19.33■□□□□ 0.68
ATG4B-221ENST00000483778 PDGFRBP09619 1106 aa19.33■□□□□ 0.68
ATG4B-221ENST00000483778 TMEM191BP0C7N4 346 aa19.33■□□□□ 0.68
ATG4B-221ENST00000483778 CCR3P51677 355 aa19.33■□□□□ 0.68
ATG4B-221ENST00000483778 ASIC1P78348 528 aa19.33■□□□□ 0.68
ATG4B-221ENST00000483778 CCINQ13939 588 aa19.33■□□□□ 0.68
ATG4B-221ENST00000483778 NFE2Q16621 373 aaPredicted RBP19.33■□□□□ 0.68
ATG4B-221ENST00000483778 ITPRIPL2Q3MIP1 535 aa19.33■□□□□ 0.68
ATG4B-221ENST00000483778 HEATR6Q6AI08 1181 aaKnown RBP19.33■□□□□ 0.68
ATG4B-221ENST00000483778 FAM171BQ6P995 826 aa19.33■□□□□ 0.68
ATG4B-221ENST00000483778 ERMP1Q7Z2K6 904 aa19.33■□□□□ 0.68
ATG4B-221ENST00000483778 MON1AQ86VX9 555 aa19.33■□□□□ 0.68
ATG4B-221ENST00000483778 TOP6BLQ8N6T0 577 aa19.33■□□□□ 0.68
ATG4B-221ENST00000483778 LEO1Q8WVC0 666 aaPredicted RBP19.33■□□□□ 0.68
ATG4B-221ENST00000483778 HPDLQ96IR7 371 aa19.33■□□□□ 0.68
ATG4B-221ENST00000483778 GCNAQ96QF7 691 aa19.33■□□□□ 0.68
ATG4B-221ENST00000483778 C7orf25Q9BPX7 421 aa19.33■□□□□ 0.68
ATG4B-221ENST00000483778 FAM126AQ9BYI3 521 aaPredicted RBP19.33■□□□□ 0.68
ATG4B-221ENST00000483778 GZF1Q9H116 711 aaPredicted RBP19.33■□□□□ 0.68
ATG4B-221ENST00000483778 BLZF1Q9H2G9 400 aa19.33■□□□□ 0.68
ATG4B-221ENST00000483778 CRTAC1Q9NQ79 661 aa19.33■□□□□ 0.68
ATG4B-221ENST00000483778 TDP1Q9NUW8 608 aa19.33■□□□□ 0.68
ATG4B-221ENST00000483778 NOL4O94818 638 aa19.32■□□□□ 0.68
ATG4B-221ENST00000483778 CSH1P0DML2 217 aa19.32■□□□□ 0.68
ATG4B-221ENST00000483778 CSH2P0DML3 217 aa19.32■□□□□ 0.68
ATG4B-221ENST00000483778 PSMC1P62191 440 aaKnown RBP19.32■□□□□ 0.68
ATG4B-221ENST00000483778 MYL7Q01449 175 aa19.32■□□□□ 0.68
ATG4B-221ENST00000483778 EHHADHQ08426 723 aa19.32■□□□□ 0.68
ATG4B-221ENST00000483778 PKP1Q13835 747 aa19.32■□□□□ 0.68
ATG4B-221ENST00000483778 RSPO4Q2I0M5 234 aaPredicted RBP19.32■□□□□ 0.68
ATG4B-221ENST00000483778 SCN4BQ8IWT1 228 aa19.32■□□□□ 0.68
ATG4B-221ENST00000483778 NELFCDQ8IXH7 590 aa19.32■□□□□ 0.68
ATG4B-221ENST00000483778 ZNF516Q92618 1163 aa19.32■□□□□ 0.68
ATG4B-221ENST00000483778 ANKRD36BP1Q96IX9 119 aa19.32■□□□□ 0.68
ATG4B-221ENST00000483778 ZNF396Q96N95 335 aaPredicted RBP19.32■□□□□ 0.68
ATG4B-221ENST00000483778 ABCB6Q9NP58 842 aa19.32■□□□□ 0.68
ATG4B-221ENST00000483778 POLR2DO15514 142 aaKnown RBP19.31■□□□□ 0.68
ATG4B-221ENST00000483778 YEATS4O95619 227 aa19.31■□□□□ 0.68
ATG4B-221ENST00000483778 NRLP54845 237 aa19.31■□□□□ 0.68
ATG4B-221ENST00000483778 FOXK2Q01167 660 aa19.31■□□□□ 0.68
ATG4B-221ENST00000483778 RUNX3Q13761 415 aa19.31■□□□□ 0.68
ATG4B-221ENST00000483778 DUOXA2Q1HG44 320 aa19.31■□□□□ 0.68
ATG4B-221ENST00000483778 FAM26FQ5R3K3 315 aa19.31■□□□□ 0.68
ATG4B-221ENST00000483778 FSTL4Q6MZW2 842 aa19.31■□□□□ 0.68
ATG4B-221ENST00000483778 CNNM4Q6P4Q7 775 aa19.31■□□□□ 0.68
ATG4B-221ENST00000483778 TRAPPC11Q7Z392 1133 aa19.31■□□□□ 0.68
ATG4B-221ENST00000483778 GRAMD1CQ8IYS0 662 aa19.31■□□□□ 0.68
ATG4B-221ENST00000483778 SCFD1Q8WVM8 642 aa19.31■□□□□ 0.68
ATG4B-221ENST00000483778 SNX21Q969T3 373 aa19.31■□□□□ 0.68
ATG4B-221ENST00000483778 MSANTD3Q96H12 275 aa19.31■□□□□ 0.68
ATG4B-221ENST00000483778 MYRFLQ96LU7 910 aa19.31■□□□□ 0.68
ATG4B-221ENST00000483778 IER2Q9BTL4 223 aa19.31■□□□□ 0.68
ATG4B-221ENST00000483778 AGPAT3Q9NRZ7 376 aa19.31■□□□□ 0.68
ATG4B-221ENST00000483778 THG1LQ9NWX6 298 aaKnown RBP19.31■□□□□ 0.68
ATG4B-221ENST00000483778 DLL3Q9NYJ7 618 aa19.31■□□□□ 0.68
ATG4B-221ENST00000483778 PCDHA7Q9UN72 937 aa19.31■□□□□ 0.68
ATG4B-221ENST00000483778 KIAA1549LQ6ZVL6 1849 aa19.3■□□□□ 0.68
ATG4B-221ENST00000483778 C2orf78A6NCI8 922 aa19.3■□□□□ 0.68
ATG4B-221ENST00000483778 EIF3DO15371 548 aaKnown RBP eCLIP19.3■□□□□ 0.68
ATG4B-221ENST00000483778 TNNC2P02585 160 aa19.3■□□□□ 0.68
ATG4B-221ENST00000483778 AVPR1AP37288 418 aa19.3■□□□□ 0.68
ATG4B-221ENST00000483778 LHX1P48742 406 aa19.3■□□□□ 0.68
ATG4B-221ENST00000483778 CYP2J2P51589 502 aa19.3■□□□□ 0.68
ATG4B-221ENST00000483778 RPL10AP62906 217 aaKnown RBP19.3■□□□□ 0.68
ATG4B-221ENST00000483778 PLCB2Q00722 1185 aa19.3■□□□□ 0.68
ATG4B-221ENST00000483778 LRRC32Q14392 662 aa19.3■□□□□ 0.68
ATG4B-221ENST00000483778 DGKKQ5KSL6 1271 aa19.3■□□□□ 0.68
ATG4B-221ENST00000483778 SPATA2LQ8IUW3 424 aaPredicted RBP19.3■□□□□ 0.68
ATG4B-221ENST00000483778 IQUBQ8NA54 791 aa19.3■□□□□ 0.68
ATG4B-221ENST00000483778 SPRYD3Q8NCJ5 442 aa19.3■□□□□ 0.68
ATG4B-221ENST00000483778 MRPS31Q92665 395 aaKnown RBP19.3■□□□□ 0.68
ATG4B-221ENST00000483778 ELMO3Q96BJ8 720 aa19.3■□□□□ 0.68
ATG4B-221ENST00000483778 SYT15Q9BQS2 421 aa19.3■□□□□ 0.68
ATG4B-221ENST00000483778 MRPL45Q9BRJ2 306 aaKnown RBP19.3■□□□□ 0.68
ATG4B-221ENST00000483778 CUEDC2Q9H467 287 aa19.3■□□□□ 0.68
ATG4B-221ENST00000483778 GCNT4Q9P109 453 aa19.3■□□□□ 0.68
ATG4B-221ENST00000483778 NCOR2Q9Y618 2525 aa19.29■□□□□ 0.68
ATG4B-221ENST00000483778 KIAA0391O15091 583 aaKnown RBP19.29■□□□□ 0.68
ATG4B-221ENST00000483778 ZSCAN22P10073 491 aaPredicted RBP19.29■□□□□ 0.68
ATG4B-221ENST00000483778 DLATP10515 647 aaKnown RBP19.29■□□□□ 0.68
ATG4B-221ENST00000483778 BDNFP23560 247 aa19.29■□□□□ 0.68
ATG4B-221ENST00000483778 AFMP43652 599 aa19.29■□□□□ 0.68
ATG4B-221ENST00000483778 PXNP49023 591 aaPredicted RBP19.29■□□□□ 0.68
ATG4B-221ENST00000483778 USP46P62068 366 aa19.29■□□□□ 0.68
ATG4B-221ENST00000483778 SPEM2Q0P670 501 aa19.29■□□□□ 0.68
ATG4B-221ENST00000483778 MYO1EQ12965 1108 aa19.29■□□□□ 0.68
ATG4B-221ENST00000483778 CUL4BQ13620 913 aa19.29■□□□□ 0.68
ATG4B-221ENST00000483778 SNRNP35Q16560 246 aaKnown RBP19.29■□□□□ 0.68
ATG4B-221ENST00000483778 CFAP221Q4G0U5 840 aa19.29■□□□□ 0.68
ATG4B-221ENST00000483778 TMEM196Q5HYL7 178 aa19.29■□□□□ 0.68
ATG4B-221ENST00000483778 PRR23BQ6ZRT6 265 aa19.29■□□□□ 0.68
ATG4B-221ENST00000483778 DGLUCYQ7Z3D6 616 aa19.29■□□□□ 0.68
ATG4B-221ENST00000483778 ARL14EPQ8N8R7 260 aaPredicted RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms