RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 C1orf54Q8WWF1 131 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 LPPQ93052 612 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 MAGOHBQ96A72 148 aaKnown RBP9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 FAM118BQ9BPY3 351 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 NT5C1AQ9BXI3 368 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 DPH5Q9H2P9 285 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 UBQLN1Q9UMX0 589 aaKnown RBP9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 R3HDM2Q9Y2K5 976 aaKnown RBP9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 CEP83Q9Y592 693 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 KPNA7A9QM74 516 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 PI4K2BG5E9Z4 385 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 PHF2O75151 1096 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 RPS6KA5O75582 802 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 PDGFRBP09619 1106 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 RALAP11233 206 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 KRT3P12035 628 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 GGCXP38435 758 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 THPOP40225 353 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 MGAT3Q09327 533 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 KLF1Q13351 362 aaPredicted RBP9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 CYP1B1Q16678 543 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 RAB6CQ53S08 254 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 SGO2Q562F6 1265 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 FBXO47Q5MNV8 452 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 MAP3K21Q5TCX8 1036 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 TRNP1Q6NT89 227 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 PMF1Q6P1K2 205 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 EMBQ6PCB8 327 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 CCDC137Q6PK04 289 aaKnown RBP9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 LCLAT1Q6UWP7 414 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 MAATS1Q7Z4T9 603 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 APBB1IPQ7Z5R6 666 aaPredicted RBP9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 JAMLQ86YT9 394 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 LRRC52Q8N7C0 313 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 CCDC26Q8TAB7 109 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 CAVIN3Q969G5 261 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 RNF25Q96BH1 459 aaPredicted RBP9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 RAB6CQ9H0N0 254 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 CHST7Q9NS84 486 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 MIOSQ9NXC5 875 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 IP6K2Q9UHH9 426 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 PDE4DIPQ5VU43 2346 aa9.33□□□□□ -0.92
CDC42SE1-204ENST00000483763 GOLGA6L10A0A0M3HER8 536 aa9.33□□□□□ -0.92
CDC42SE1-204ENST00000483763 SIGLEC16A6NMB1 481 aa9.33□□□□□ -0.92
CDC42SE1-204ENST00000483763 E5RJQ4 531 aa9.33□□□□□ -0.92
CDC42SE1-204ENST00000483763 MGEA5O60502 916 aa9.33□□□□□ -0.92
CDC42SE1-204ENST00000483763 KRT10P13645 584 aa9.33□□□□□ -0.92
CDC42SE1-204ENST00000483763 IL1R2P27930 398 aa9.33□□□□□ -0.92
CDC42SE1-204ENST00000483763 MLH1P40692 756 aa9.33□□□□□ -0.92
CDC42SE1-204ENST00000483763 LILRA4P59901 499 aa9.33□□□□□ -0.92
CDC42SE1-204ENST00000483763 HLTFQ14527 1009 aaKnown RBP eCLIP9.33□□□□□ -0.92
CDC42SE1-204ENST00000483763 ARHGEF6Q15052 776 aa9.33□□□□□ -0.92
CDC42SE1-204ENST00000483763 TAF5Q15542 800 aa9.33□□□□□ -0.92
CDC42SE1-204ENST00000483763 PTGISQ16647 500 aa9.33□□□□□ -0.92
CDC42SE1-204ENST00000483763 PKDCCQ504Y2 493 aa9.33□□□□□ -0.92
CDC42SE1-204ENST00000483763 SH3PXD2AQ5TCZ1 1133 aa9.33□□□□□ -0.92
CDC42SE1-204ENST00000483763 RHOT1Q8IXI2 618 aa9.33□□□□□ -0.92
CDC42SE1-204ENST00000483763 OR6B3Q8NGW1 331 aa9.33□□□□□ -0.92
CDC42SE1-204ENST00000483763 RAPGEF5Q92565 580 aa9.33□□□□□ -0.92
CDC42SE1-204ENST00000483763 GAD1Q99259 594 aa9.33□□□□□ -0.92
CDC42SE1-204ENST00000483763 TRAIPQ9BWF2 469 aa9.33□□□□□ -0.92
CDC42SE1-204ENST00000483763 VIPAS39Q9H9C1 493 aa9.33□□□□□ -0.92
CDC42SE1-204ENST00000483763 METTL5Q9NRN9 209 aaKnown RBP9.33□□□□□ -0.92
CDC42SE1-204ENST00000483763 FAM105AQ9NUU6 356 aa9.33□□□□□ -0.92
CDC42SE1-204ENST00000483763 PCYOX1Q9UHG3 505 aa9.33□□□□□ -0.92
CDC42SE1-204ENST00000483763 TRPV2Q9Y5S1 764 aa9.33□□□□□ -0.92
CDC42SE1-204ENST00000483763 PSTPIP1O43586 416 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 GHRP10912 638 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 CD52P31358 61 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 CHRNA3P32297 505 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 MAN1A1P33908 653 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 GABRB2P47870 512 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 RGS7P49802 495 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 PAK2Q13177 524 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 SNX1Q13596 522 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 KCNT1Q5JUK3 1230 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 DUPD1Q68J44 220 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 PPP1R2P3Q6NXS1 205 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 KATNAL2Q8IYT4 538 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 PIK3R5Q8WYR1 880 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 PPP1R10Q96QC0 940 aaKnown RBP9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 PAAF1Q9BRP4 392 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 ERP44Q9BS26 406 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 B3GNT5Q9BYG0 378 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 UNC93B1Q9H1C4 597 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 SYNCQ9H7C4 482 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 DDX20Q9UHI6 824 aaKnown RBP9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 STRIP2Q9ULQ0 834 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 A8MXQ7 604 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 M0QZ92 97 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 TP73O15350 636 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 LRCH4O75427 683 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 GRAP2O75791 330 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 GNRH1P01148 92 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 CD4P01730 458 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 INHAP05111 366 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 CST5P28325 142 aaPredicted RBP9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 GRK4P32298 578 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 COILP38432 576 aaPredicted RBP9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 AARSP49588 968 aaKnown RBP eCLIP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms