RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 CDR1P51861 262 aa19.2■□□□□ 0.66
HDAC6-225ENST00000483506 CBWD6Q4V339 395 aa19.2■□□□□ 0.66
HDAC6-225ENST00000483506 DCAF17Q5H9S7 520 aaPredicted RBP19.2■□□□□ 0.66
HDAC6-225ENST00000483506 CBWD3Q5JTY5 395 aa19.2■□□□□ 0.66
HDAC6-225ENST00000483506 CBWD5Q5RIA9 395 aa19.2■□□□□ 0.66
HDAC6-225ENST00000483506 PARM1Q6UWI2 310 aa19.2■□□□□ 0.66
HDAC6-225ENST00000483506 SCARA5Q6ZMJ2 495 aa19.2■□□□□ 0.66
HDAC6-225ENST00000483506 GAREM2Q75VX8 874 aa19.2■□□□□ 0.66
HDAC6-225ENST00000483506 B3GALNT2Q8NCR0 500 aa19.2■□□□□ 0.66
HDAC6-225ENST00000483506 CCDC150Q8NCX0 1101 aa19.2■□□□□ 0.66
HDAC6-225ENST00000483506 FGF14Q92915 247 aa19.2■□□□□ 0.66
HDAC6-225ENST00000483506 ASIC4Q96FT7 647 aa19.2■□□□□ 0.66
HDAC6-225ENST00000483506 MED15Q96RN5 788 aa19.2■□□□□ 0.66
HDAC6-225ENST00000483506 FAM124BQ9H5Z6 455 aaPredicted RBP19.2■□□□□ 0.66
HDAC6-225ENST00000483506 MMRN2Q9H8L6 949 aa19.2■□□□□ 0.66
HDAC6-225ENST00000483506 IL21Q9HBE4 155 aa19.2■□□□□ 0.66
HDAC6-225ENST00000483506 RAB20Q9NX57 234 aa19.2■□□□□ 0.66
HDAC6-225ENST00000483506 NUMBLQ9Y6R0 609 aa19.2■□□□□ 0.66
HDAC6-225ENST00000483506 DENND4CQ5VZ89 1909 aa19.19■□□□□ 0.66
HDAC6-225ENST00000483506 LRRN2O75325 713 aa19.19■□□□□ 0.66
HDAC6-225ENST00000483506 NOL4O94818 638 aa19.19■□□□□ 0.66
HDAC6-225ENST00000483506 CSH1P0DML2 217 aa19.19■□□□□ 0.66
HDAC6-225ENST00000483506 CSH2P0DML3 217 aa19.19■□□□□ 0.66
HDAC6-225ENST00000483506 GPR15P49685 360 aa19.19■□□□□ 0.66
HDAC6-225ENST00000483506 STX17P56962 302 aa19.19■□□□□ 0.66
HDAC6-225ENST00000483506 MDH1BQ5I0G3 518 aa19.19■□□□□ 0.66
HDAC6-225ENST00000483506 TCERG1LQ5VWI1 586 aa19.19■□□□□ 0.66
HDAC6-225ENST00000483506 RBM43Q6ZSC3 357 aaKnown RBP19.19■□□□□ 0.66
HDAC6-225ENST00000483506 BMP8AQ7Z5Y6 402 aa19.19■□□□□ 0.66
HDAC6-225ENST00000483506 SLC44A3Q8N4M1 653 aa19.19■□□□□ 0.66
HDAC6-225ENST00000483506 FAM200AQ8TCP9 573 aa19.19■□□□□ 0.66
HDAC6-225ENST00000483506 RSAD2Q8WXG1 361 aa19.19■□□□□ 0.66
HDAC6-225ENST00000483506 MCRS1Q96EZ8 462 aa19.19■□□□□ 0.66
HDAC6-225ENST00000483506 TRMT2BQ96GJ1 504 aaKnown RBP19.19■□□□□ 0.66
HDAC6-225ENST00000483506 TNIP3Q96KP6 325 aa19.19■□□□□ 0.66
HDAC6-225ENST00000483506 SPATA17Q96L03 361 aa19.19■□□□□ 0.66
HDAC6-225ENST00000483506 MYRFLQ96LU7 910 aa19.19■□□□□ 0.66
HDAC6-225ENST00000483506 GPR88Q9GZN0 384 aa19.19■□□□□ 0.66
HDAC6-225ENST00000483506 SMOC2Q9H3U7 446 aa19.19■□□□□ 0.66
HDAC6-225ENST00000483506 TRPV4Q9HBA0 871 aa19.19■□□□□ 0.66
HDAC6-225ENST00000483506 OBSL1O75147 1896 aa19.18■□□□□ 0.66
HDAC6-225ENST00000483506 A0A1W2PRU2 124 aa19.18■□□□□ 0.66
HDAC6-225ENST00000483506 TMEM221A6NGB7 291 aa19.18■□□□□ 0.66
HDAC6-225ENST00000483506 M0R296 226 aa19.18■□□□□ 0.66
HDAC6-225ENST00000483506 ECI2O75521 394 aa19.18■□□□□ 0.66
HDAC6-225ENST00000483506 FGFR1OPO95684 399 aaKnown RBP19.18■□□□□ 0.66
HDAC6-225ENST00000483506 FCARP24071 287 aa19.18■□□□□ 0.66
HDAC6-225ENST00000483506 CDC25CP30307 473 aa19.18■□□□□ 0.66
HDAC6-225ENST00000483506 TEAD2Q15562 447 aa19.18■□□□□ 0.66
HDAC6-225ENST00000483506 DDR2Q16832 855 aa19.18■□□□□ 0.66
HDAC6-225ENST00000483506 CCDC40Q4G0X9 1142 aa19.18■□□□□ 0.66
HDAC6-225ENST00000483506 TRIM59Q8IWR1 403 aa19.18■□□□□ 0.66
HDAC6-225ENST00000483506 CRYBG2Q8N1P7 616 aa19.18■□□□□ 0.66
HDAC6-225ENST00000483506 GIPC2Q8TF65 315 aa19.18■□□□□ 0.66
HDAC6-225ENST00000483506 ASB16Q96NS5 453 aa19.18■□□□□ 0.66
HDAC6-225ENST00000483506 LRFN3Q9BTN0 628 aa19.18■□□□□ 0.66
HDAC6-225ENST00000483506 ELOVL4Q9GZR5 314 aa19.18■□□□□ 0.66
HDAC6-225ENST00000483506 FAM86C2PA6NEL3 165 aa19.17■□□□□ 0.66
HDAC6-225ENST00000483506 TRIM66O15016 1216 aa19.17■□□□□ 0.66
HDAC6-225ENST00000483506 P4HA2O15460 535 aa19.17■□□□□ 0.66
HDAC6-225ENST00000483506 CLSTN1O94985 981 aa19.17■□□□□ 0.66
HDAC6-225ENST00000483506 SRFP11831 508 aa19.17■□□□□ 0.66
HDAC6-225ENST00000483506 BDNFP23560 247 aa19.17■□□□□ 0.66
HDAC6-225ENST00000483506 GABRR2P28476 465 aa19.17■□□□□ 0.66
HDAC6-225ENST00000483506 WEE1P30291 646 aa19.17■□□□□ 0.66
HDAC6-225ENST00000483506 FMO5P49326 533 aa19.17■□□□□ 0.66
HDAC6-225ENST00000483506 NDST1P52848 882 aa19.17■□□□□ 0.66
HDAC6-225ENST00000483506 CYP27A1Q02318 531 aa19.17■□□□□ 0.66
HDAC6-225ENST00000483506 TMEM150AQ86TG1 271 aa19.17■□□□□ 0.66
HDAC6-225ENST00000483506 TTC39CQ8N584 583 aa19.17■□□□□ 0.66
HDAC6-225ENST00000483506 C8orf48Q96LL4 319 aa19.17■□□□□ 0.66
HDAC6-225ENST00000483506 RPP25Q9BUL9 199 aaKnown RBP19.17■□□□□ 0.66
HDAC6-225ENST00000483506 SRRTQ9BXP5 876 aaKnown RBP19.17■□□□□ 0.66
HDAC6-225ENST00000483506 B3GNT5Q9BYG0 378 aa19.17■□□□□ 0.66
HDAC6-225ENST00000483506 SLC2A4RGQ9NR83 387 aa19.17■□□□□ 0.66
HDAC6-225ENST00000483506 HMGXB4Q9UGU5 601 aa19.17■□□□□ 0.66
HDAC6-225ENST00000483506 ZMYM5Q9UJ78 669 aa19.17■□□□□ 0.66
HDAC6-225ENST00000483506 NUP210Q8TEM1 1887 aaPredicted RBP19.17■□□□□ 0.66
HDAC6-225ENST00000483506 SLC38A8A6NNN8 435 aa19.16■□□□□ 0.66
HDAC6-225ENST00000483506 SOBPA7XYQ1 873 aa19.16■□□□□ 0.66
HDAC6-225ENST00000483506 CILPO75339 1184 aa19.16■□□□□ 0.66
HDAC6-225ENST00000483506 MBD3O95983 291 aa19.16■□□□□ 0.66
HDAC6-225ENST00000483506 F11P03951 625 aa19.16■□□□□ 0.66
HDAC6-225ENST00000483506 GJA1P17302 382 aa19.16■□□□□ 0.66
HDAC6-225ENST00000483506 ERCC5P28715 1186 aaPredicted RBP19.16■□□□□ 0.66
HDAC6-225ENST00000483506 NLRP12P59046 1061 aa19.16■□□□□ 0.66
HDAC6-225ENST00000483506 TAF12Q16514 161 aa19.16■□□□□ 0.66
HDAC6-225ENST00000483506 DPCR1Q3MIW9 517 aa19.16■□□□□ 0.66
HDAC6-225ENST00000483506 CT47A1Q5JQC4 288 aaPredicted RBP19.16■□□□□ 0.66
HDAC6-225ENST00000483506 FAM78AQ5JUQ0 283 aa19.16■□□□□ 0.66
HDAC6-225ENST00000483506 SDHAF4Q5VUM1 108 aa19.16■□□□□ 0.66
HDAC6-225ENST00000483506 GPR152Q8TDT2 470 aa19.16■□□□□ 0.66
HDAC6-225ENST00000483506 SMARCD2Q92925 531 aa19.16■□□□□ 0.66
HDAC6-225ENST00000483506 ELSPBP1Q96BH3 223 aa19.16■□□□□ 0.66
HDAC6-225ENST00000483506 ZSWIM3Q96MP5 696 aa19.16■□□□□ 0.66
HDAC6-225ENST00000483506 ZNF518BQ9C0D4 1074 aa19.16■□□□□ 0.66
HDAC6-225ENST00000483506 ATXN3LQ9H3M9 355 aa19.16■□□□□ 0.66
HDAC6-225ENST00000483506 UXTQ9UBK9 157 aaPredicted RBP19.16■□□□□ 0.66
HDAC6-225ENST00000483506 NARSO43776 548 aaKnown RBP19.15■□□□□ 0.66
HDAC6-225ENST00000483506 CCDC192P0DO97 292 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms