RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 SLC7A14Q8TBB6 771 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 GRIN3AQ8TCU5 1115 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 NUDT8Q8WV74 236 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 FGF13Q92913 245 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 FGF14Q92915 247 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 SECISBP2LQ93073 1101 aaKnown RBP6.45□□□□□ -1.38
CSDE1-207ENST00000483407 NACC1Q96RE7 527 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 CLSTN3Q9BQT9 956 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 PAAF1Q9BRP4 392 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 FOXQ1Q9C009 403 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 FZD8Q9H461 694 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 PDZD7Q9H5P4 517 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 GPRC5CQ9NQ84 441 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 SPATA6Q9NWH7 488 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-207ENST00000483407 CACNA2D2Q9NY47 1150 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 SNTG2Q9NY99 539 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 DLGAP2Q9P1A6 1054 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 CACNG4Q9UBN1 327 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 KCNH3Q9ULD8 1083 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 FAM186AA6NE01 2351 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 RIF1Q5UIP0 2472 aaKnown RBP6.44□□□□□ -1.38
CSDE1-207ENST00000483407 A0A087WWV3 80 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 FAM170BA6NMN3 283 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 BTBD18B2RXH4 712 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 TMEM189-UBE2V1I3L0A0 370 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 ACKR2O00590 384 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 PTGESO14684 152 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 NCAM2O15394 837 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 CTDNEP1O95476 244 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 FDPSP14324 419 aaKnown RBP6.44□□□□□ -1.38
CSDE1-207ENST00000483407 CYP11B2P19099 503 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 ELF1P32519 619 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 MCM7P33993 719 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 NAMPTP43490 491 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 EFNA5P52803 228 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 ANAPC15P60006 121 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 NTHL1P78549 312 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 RAB33AQ14088 237 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 SEPT6Q14141 434 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 SAFBQ15424 915 aaKnown RBP eCLIP6.44□□□□□ -1.38
CSDE1-207ENST00000483407 ZNF528Q3MIS6 628 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 PABPC1LQ4VXU2 614 aaKnown RBP6.44□□□□□ -1.38
CSDE1-207ENST00000483407 SLC44A4Q53GD3 710 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 HAUS3Q68CZ6 603 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 C1orf229Q6ZS94 237 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-207ENST00000483407 ANKS3Q6ZW76 656 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 CATSPER3Q86XQ3 398 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 NOSTRINQ8IVI9 506 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 IL22RA1Q8N6P7 574 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 FBXO27Q8NI29 283 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 ITFG1Q8TB96 612 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 ATRIPQ8WXE1 791 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 GAL3ST3Q96A11 431 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 RMDN1Q96DB5 314 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 IFT74Q96LB3 600 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 UROC1Q96N76 676 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 MTMR9Q96QG7 549 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 NELL2Q99435 816 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 POLR3CQ9BUI4 534 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-207ENST00000483407 RPP25Q9BUL9 199 aaKnown RBP6.44□□□□□ -1.38
CSDE1-207ENST00000483407 OSBPL6Q9BZF3 934 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 MTRRQ9UBK8 725 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 FBXO4Q9UKT5 387 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 MRPS17Q9Y2R5 130 aaKnown RBP6.44□□□□□ -1.38
CSDE1-207ENST00000483407 GDAQ9Y2T3 454 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 MRPS23Q9Y3D9 190 aaKnown RBP6.44□□□□□ -1.38
CSDE1-207ENST00000483407 DENND4AQ7Z401 1863 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 DCHS1Q96JQ0 3298 aa6.44□□□□□ -1.38
CSDE1-207ENST00000483407 ADAM12O43184 909 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 DTNBO60941 627 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 LILRB5O75023 590 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 LRRN2O75325 713 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 MED24O75448 989 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 ECI2O75521 394 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 LRG1P02750 347 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 ALBP02768 609 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 RHOP08100 348 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 GSTP1P09211 210 aaKnown RBP6.43□□□□□ -1.38
CSDE1-207ENST00000483407 SPATA31C1P0DKV0 1188 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 GLULP15104 373 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 SDHBP21912 280 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 MUTP22033 750 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 RPA1P27694 616 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 OR1D2P34982 312 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 ETFBP38117 255 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 YARSP54577 528 aaKnown RBP6.43□□□□□ -1.38
CSDE1-207ENST00000483407 ORC2Q13416 577 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-207ENST00000483407 SEZ6Q53EL9 994 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 GLRA4Q5JXX5 417 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 ZBTB41Q5SVQ8 909 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 ATF7IP2Q5U623 682 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 HGSNATQ68CP4 663 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 ZNF852Q6ZMS4 543 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 NECAB1Q8N987 351 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 KIFAP3Q92845 792 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 GTF3C6Q969F1 213 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 ACDQ96AP0 544 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 KXD1Q9BQD3 176 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 DDX23Q9BUQ8 820 aaKnown RBP6.43□□□□□ -1.38
CSDE1-207ENST00000483407 CCDC94Q9BW85 323 aaPredicted RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms