RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 USP25Q9UHP3 1055 aa12.94□□□□□ -0.34
HDLBP-239ENST00000483086 SIT1Q9Y3P8 196 aa12.94□□□□□ -0.34
HDLBP-239ENST00000483086 GPR179Q6PRD1 2367 aa12.94□□□□□ -0.34
HDLBP-239ENST00000483086 OTOGLQ3ZCN5 2332 aa12.94□□□□□ -0.34
HDLBP-239ENST00000483086 EP300Q09472 2414 aaPredicted RBP12.93□□□□□ -0.34
HDLBP-239ENST00000483086 PDXKO00764 312 aa12.93□□□□□ -0.34
HDLBP-239ENST00000483086 NOL4O94818 638 aa12.93□□□□□ -0.34
HDLBP-239ENST00000483086 HOXC13P31276 330 aa12.93□□□□□ -0.34
HDLBP-239ENST00000483086 LHX1P48742 406 aa12.93□□□□□ -0.34
HDLBP-239ENST00000483086 USP46P62068 366 aa12.93□□□□□ -0.34
HDLBP-239ENST00000483086 MYL7Q01449 175 aa12.93□□□□□ -0.34
HDLBP-239ENST00000483086 TSPY1Q01534 308 aa12.93□□□□□ -0.34
HDLBP-239ENST00000483086 PRKCQQ04759 706 aa12.93□□□□□ -0.34
HDLBP-239ENST00000483086 FCHO2Q0JRZ9 810 aa12.93□□□□□ -0.34
HDLBP-239ENST00000483086 PSMD2Q13200 908 aa12.93□□□□□ -0.34
HDLBP-239ENST00000483086 PNOCQ13519 176 aa12.93□□□□□ -0.34
HDLBP-239ENST00000483086 UBXN2BQ14CS0 331 aa12.93□□□□□ -0.34
HDLBP-239ENST00000483086 CFAP221Q4G0U5 840 aa12.93□□□□□ -0.34
HDLBP-239ENST00000483086 ZCWPW2Q504Y3 356 aa12.93□□□□□ -0.34
HDLBP-239ENST00000483086 TXNDC8Q6A555 127 aa12.93□□□□□ -0.34
HDLBP-239ENST00000483086 TXNDC11Q6PKC3 985 aa12.93□□□□□ -0.34
HDLBP-239ENST00000483086 DPH6Q7L8W6 267 aa12.93□□□□□ -0.34
HDLBP-239ENST00000483086 ASCL5Q7RTU5 278 aa12.93□□□□□ -0.34
HDLBP-239ENST00000483086 FRMD5Q7Z6J6 570 aa12.93□□□□□ -0.34
HDLBP-239ENST00000483086 SPATA18Q8TC71 538 aa12.93□□□□□ -0.34
HDLBP-239ENST00000483086 FAM200AQ8TCP9 573 aa12.93□□□□□ -0.34
HDLBP-239ENST00000483086 FNBP1Q96RU3 617 aa12.93□□□□□ -0.34
HDLBP-239ENST00000483086 SLC22A12Q96S37 553 aa12.93□□□□□ -0.34
HDLBP-239ENST00000483086 TRMT61BQ9BVS5 477 aaKnown RBP12.93□□□□□ -0.34
HDLBP-239ENST00000483086 BRD9Q9H8M2 597 aa12.93□□□□□ -0.34
HDLBP-239ENST00000483086 CGNQ9P2M7 1197 aaKnown RBP12.93□□□□□ -0.34
HDLBP-239ENST00000483086 TRAF3IP3Q9Y228 551 aa12.93□□□□□ -0.34
HDLBP-239ENST00000483086 PTPRZ1P23471 2315 aaPredicted RBP12.93□□□□□ -0.34
HDLBP-239ENST00000483086 OTOL1A6NHN0 477 aaPredicted RBP12.92□□□□□ -0.34
HDLBP-239ENST00000483086 FAM170BA6NMN3 283 aa12.92□□□□□ -0.34
HDLBP-239ENST00000483086 SLC38A8A6NNN8 435 aa12.92□□□□□ -0.34
HDLBP-239ENST00000483086 CLDN5O00501 218 aa12.92□□□□□ -0.34
HDLBP-239ENST00000483086 TACC1O75410 805 aa12.92□□□□□ -0.34
HDLBP-239ENST00000483086 AKAP3O75969 853 aa12.92□□□□□ -0.34
HDLBP-239ENST00000483086 STAU1O95793 577 aaKnown RBP12.92□□□□□ -0.34
HDLBP-239ENST00000483086 BDNFP23560 247 aa12.92□□□□□ -0.34
HDLBP-239ENST00000483086 NBL1P41271 181 aa12.92□□□□□ -0.34
HDLBP-239ENST00000483086 ZXDBP98169 803 aa12.92□□□□□ -0.34
HDLBP-239ENST00000483086 PFKPQ01813 784 aa12.92□□□□□ -0.34
HDLBP-239ENST00000483086 TNK2Q07912 1038 aa12.92□□□□□ -0.34
HDLBP-239ENST00000483086 SMARCB1Q12824 385 aa12.92□□□□□ -0.34
HDLBP-239ENST00000483086 MYO1EQ12965 1108 aa12.92□□□□□ -0.34
HDLBP-239ENST00000483086 NFE2Q16621 373 aaPredicted RBP12.92□□□□□ -0.34
HDLBP-239ENST00000483086 WDR72Q3MJ13 1102 aa12.92□□□□□ -0.34
HDLBP-239ENST00000483086 SPOPLQ6IQ16 392 aa12.92□□□□□ -0.34
HDLBP-239ENST00000483086 PAQR9Q6ZVX9 377 aa12.92□□□□□ -0.34
HDLBP-239ENST00000483086 ITIH5Q86UX2 942 aa12.92□□□□□ -0.34
HDLBP-239ENST00000483086 TTC8Q8TAM2 541 aa12.92□□□□□ -0.34
HDLBP-239ENST00000483086 DNASE1L2Q92874 299 aa12.92□□□□□ -0.34
HDLBP-239ENST00000483086 EEF2KMTQ96G04 330 aa12.92□□□□□ -0.34
HDLBP-239ENST00000483086 PCED1BQ96HM7 432 aa12.92□□□□□ -0.34
HDLBP-239ENST00000483086 MMS19Q96T76 1030 aa12.92□□□□□ -0.34
HDLBP-239ENST00000483086 TASP1Q9H6P5 420 aa12.92□□□□□ -0.34
HDLBP-239ENST00000483086 ABCB6Q9NP58 842 aa12.92□□□□□ -0.34
HDLBP-239ENST00000483086 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.92□□□□□ -0.34
HDLBP-239ENST00000483086 HMGXB4Q9UGU5 601 aa12.92□□□□□ -0.34
HDLBP-239ENST00000483086 CDH9Q9ULB4 789 aa12.92□□□□□ -0.34
HDLBP-239ENST00000483086 MAGED2Q9UNF1 606 aaPredicted RBP12.92□□□□□ -0.34
HDLBP-239ENST00000483086 EML5Q05BV3 1969 aa12.92□□□□□ -0.34
HDLBP-239ENST00000483086 PROB1E7EW31 1015 aa12.91□□□□□ -0.34
HDLBP-239ENST00000483086 MYL1P05976 194 aa12.91□□□□□ -0.34
HDLBP-239ENST00000483086 TRIM49P0CI25 452 aa12.91□□□□□ -0.34
HDLBP-239ENST00000483086 TRIM49CP0CI26 452 aa12.91□□□□□ -0.34
HDLBP-239ENST00000483086 PCSK1P29120 753 aa12.91□□□□□ -0.34
HDLBP-239ENST00000483086 PMS1P54277 932 aaKnown RBP12.91□□□□□ -0.34
HDLBP-239ENST00000483086 PPP3CAQ08209 521 aa12.91□□□□□ -0.34
HDLBP-239ENST00000483086 ORC1Q13415 861 aa12.91□□□□□ -0.34
HDLBP-239ENST00000483086 GAS6Q14393 721 aa12.91□□□□□ -0.34
HDLBP-239ENST00000483086 KCNB1Q14721 858 aa12.91□□□□□ -0.34
HDLBP-239ENST00000483086 ZACNQ401N2 412 aa12.91□□□□□ -0.34
HDLBP-239ENST00000483086 MDH1BQ5I0G3 518 aa12.91□□□□□ -0.34
HDLBP-239ENST00000483086 SCARA5Q6ZMJ2 495 aa12.91□□□□□ -0.34
HDLBP-239ENST00000483086 SV2AQ7L0J3 742 aa12.91□□□□□ -0.34
HDLBP-239ENST00000483086 SCN4BQ8IWT1 228 aa12.91□□□□□ -0.34
HDLBP-239ENST00000483086 MAB21L3Q8N8X9 362 aa12.91□□□□□ -0.34
HDLBP-239ENST00000483086 MYCBPAPQ8TBZ2 947 aa12.91□□□□□ -0.34
HDLBP-239ENST00000483086 DEPDC1BQ8WUY9 529 aa12.91□□□□□ -0.34
HDLBP-239ENST00000483086 USP13Q92995 863 aaPredicted RBP12.91□□□□□ -0.34
HDLBP-239ENST00000483086 CLDN23Q96B33 292 aa12.91□□□□□ -0.34
HDLBP-239ENST00000483086 MYRFLQ96LU7 910 aa12.91□□□□□ -0.34
HDLBP-239ENST00000483086 CYP2S1Q96SQ9 504 aa12.91□□□□□ -0.34
HDLBP-239ENST00000483086 B3GNT5Q9BYG0 378 aa12.91□□□□□ -0.34
HDLBP-239ENST00000483086 ZNF518BQ9C0D4 1074 aa12.91□□□□□ -0.34
HDLBP-239ENST00000483086 GPR88Q9GZN0 384 aa12.91□□□□□ -0.34
HDLBP-239ENST00000483086 VRTNQ9H8Y1 702 aa12.91□□□□□ -0.34
HDLBP-239ENST00000483086 APOBEC3GQ9HC16 384 aaKnown RBP12.91□□□□□ -0.34
HDLBP-239ENST00000483086 TRPV5Q9NQA5 729 aa12.91□□□□□ -0.34
HDLBP-239ENST00000483086 GTSE1Q9NYZ3 720 aa12.91□□□□□ -0.34
HDLBP-239ENST00000483086 NXF1Q9UBU9 619 aaKnown RBP12.91□□□□□ -0.34
HDLBP-239ENST00000483086 R4GN57 208 aa12.91□□□□□ -0.34
HDLBP-239ENST00000483086 C2orf78A6NCI8 922 aa12.9□□□□□ -0.34
HDLBP-239ENST00000483086 ZNF263O14978 683 aa12.9□□□□□ -0.34
HDLBP-239ENST00000483086 GADD45BO75293 160 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-239ENST00000483086 RFX1P22670 979 aa12.9□□□□□ -0.34
HDLBP-239ENST00000483086 WEE1P30291 646 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms