RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 UBA7P41226 1012 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 IFNAR2P48551 515 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 DGKEP52429 567 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 ZNF131P52739 623 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 GTF2BQ00403 316 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 TSPY1Q01534 308 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 FAM160A1Q05DH4 1040 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 FOXC1Q12948 553 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 MCM6Q14566 821 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 ZNF268Q14587 947 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-206ENST00000483030 MTF1Q14872 753 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 KARSQ15046 597 aaKnown RBP7.95□□□□□ -1.14
CSDE1-206ENST00000483030 NFE2Q16621 373 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-206ENST00000483030 ZC2HC1CQ53FD0 456 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-206ENST00000483030 USP39Q53GS9 565 aaKnown RBP7.95□□□□□ -1.14
CSDE1-206ENST00000483030 RILPL1Q5EBL4 403 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 SH3PXD2AQ5TCZ1 1133 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 DAB2IPQ5VWQ8 1189 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 SLFN12LQ6IEE8 588 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 UNQ6494/PRO21346Q6UXR6 183 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 EFCAB13Q8IY85 973 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 CPA6Q8N4T0 437 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 LRRC15Q8TF66 581 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 OSCP1Q8WVF1 389 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 SLC39A7Q92504 469 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 EXOC4Q96A65 974 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 CALML4Q96GE6 196 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 SLC22A12Q96S37 553 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 FIZ1Q96SL8 496 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 MFRPQ9BY79 579 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 CCSER1Q9C0I3 900 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 IKZF4Q9H2S9 585 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 LINC00597Q9H2U6 94 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 TRPC7Q9HCX4 862 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 BLOC1S4Q9NUP1 217 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 AGO2Q9UKV8 859 aaKnown RBP7.95□□□□□ -1.14
CSDE1-206ENST00000483030 ZMIZ1Q9ULJ6 1067 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 WNT6Q9Y6F9 365 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 TRAV19A0A0A6YYK7 116 aa7.94□□□□□ -1.14
CSDE1-206ENST00000483030 LNP1A1A4G5 178 aa7.94□□□□□ -1.14
CSDE1-206ENST00000483030 ANTXRLA6NF34 631 aa7.94□□□□□ -1.14
CSDE1-206ENST00000483030 PATE3B3GLJ2 98 aa7.94□□□□□ -1.14
CSDE1-206ENST00000483030 TBCAO75347 108 aaKnown RBP7.94□□□□□ -1.14
CSDE1-206ENST00000483030 TADA3O75528 432 aa7.94□□□□□ -1.14
CSDE1-206ENST00000483030 TOP3BO95985 862 aaKnown RBP7.94□□□□□ -1.14
CSDE1-206ENST00000483030 CKMP06732 381 aa7.94□□□□□ -1.14
CSDE1-206ENST00000483030 USP17L7P0C7H9 530 aa7.94□□□□□ -1.14
CSDE1-206ENST00000483030 ACAT1P24752 427 aaKnown RBP7.94□□□□□ -1.14
CSDE1-206ENST00000483030 RPL10AP62906 217 aaKnown RBP7.94□□□□□ -1.14
CSDE1-206ENST00000483030 IRX4P78413 519 aa7.94□□□□□ -1.14
CSDE1-206ENST00000483030 TFAMQ00059 246 aaKnown RBP7.94□□□□□ -1.14
CSDE1-206ENST00000483030 ZNF252P-AS1Q0IIN9 211 aa7.94□□□□□ -1.14
CSDE1-206ENST00000483030 NR1H3Q13133 447 aa7.94□□□□□ -1.14
CSDE1-206ENST00000483030 EML3Q32P44 896 aa7.94□□□□□ -1.14
CSDE1-206ENST00000483030 UAP1L1Q3KQV9 507 aa7.94□□□□□ -1.14
CSDE1-206ENST00000483030 SV2CQ496J9 727 aa7.94□□□□□ -1.14
CSDE1-206ENST00000483030 C2orf27AQ580R0 203 aa7.94□□□□□ -1.14
CSDE1-206ENST00000483030 ARL6IP4Q66PJ3 421 aaKnown RBP7.94□□□□□ -1.14
CSDE1-206ENST00000483030 CRELD2Q6UXH1 353 aaPredicted RBP7.94□□□□□ -1.14
CSDE1-206ENST00000483030 PDCL2Q8N4E4 241 aa7.94□□□□□ -1.14
CSDE1-206ENST00000483030 CCDC33Q8N5R6 958 aa7.94□□□□□ -1.14
CSDE1-206ENST00000483030 ARL14EPQ8N8R7 260 aaPredicted RBP7.94□□□□□ -1.14
CSDE1-206ENST00000483030 KDF1Q8NAX2 398 aaPredicted RBP7.94□□□□□ -1.14
CSDE1-206ENST00000483030 TSTD1Q8NFU3 115 aa7.94□□□□□ -1.14
CSDE1-206ENST00000483030 POMGNT1Q8WZA1 660 aa7.94□□□□□ -1.14
CSDE1-206ENST00000483030 ATP2A3Q93084 1043 aa7.94□□□□□ -1.14
CSDE1-206ENST00000483030 ACDQ96AP0 544 aa7.94□□□□□ -1.14
CSDE1-206ENST00000483030 ZNF560Q96MR9 790 aa7.94□□□□□ -1.14
CSDE1-206ENST00000483030 ACBD6Q9BR61 282 aa7.94□□□□□ -1.14
CSDE1-206ENST00000483030 ANP32EQ9BTT0 268 aa7.94□□□□□ -1.14
CSDE1-206ENST00000483030 TPSD1Q9BZJ3 242 aa7.94□□□□□ -1.14
CSDE1-206ENST00000483030 TMEM9BQ9NQ34 198 aa7.94□□□□□ -1.14
CSDE1-206ENST00000483030 DDX43Q9NXZ2 648 aaKnown RBP7.94□□□□□ -1.14
CSDE1-206ENST00000483030 UXTQ9UBK9 157 aaPredicted RBP7.94□□□□□ -1.14
CSDE1-206ENST00000483030 GTF3C4Q9UKN8 822 aa7.94□□□□□ -1.14
CSDE1-206ENST00000483030 AGAP1Q9UPQ3 857 aa7.94□□□□□ -1.14
CSDE1-206ENST00000483030 WASF3Q9UPY6 502 aa7.94□□□□□ -1.14
CSDE1-206ENST00000483030 STYXL1Q9Y6J8 313 aa7.94□□□□□ -1.14
CSDE1-206ENST00000483030 CEP295Q9C0D2 2601 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 C2orf78A6NCI8 922 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 K7EQS6 105 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 CDX4O14627 284 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-206ENST00000483030 SLC26A4O43511 780 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 HUS1O60921 280 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 NOL4O94818 638 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 IL18RAPO95256 599 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 C7P10643 843 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 CEACAM1P13688 526 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 HDCP19113 662 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 PLCG1P19174 1290 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 BCKDHBP21953 392 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 ADSSP30520 456 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 POLR2BP30876 1174 aaKnown RBP7.93□□□□□ -1.14
CSDE1-206ENST00000483030 ABCD1P33897 745 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 PNPLA4P41247 253 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 DHPSP49366 369 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-206ENST00000483030 SEC13P55735 322 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 WNT7BP56706 349 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 POU5F1Q01860 360 aaKnown RBP7.93□□□□□ -1.14
CSDE1-206ENST00000483030 PDAP1Q13442 181 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms