RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 VSTM1Q6UX27 236 aa14.83□□□□□ -0.04
VARS-225ENST00000482996 MFSD6LQ8IWD5 586 aa14.83□□□□□ -0.04
VARS-225ENST00000482996 YAF2Q8IY57 180 aa14.83□□□□□ -0.04
VARS-225ENST00000482996 SMYD4Q8IYR2 804 aaPredicted RBP14.83□□□□□ -0.04
VARS-225ENST00000482996 MYCBPAPQ8TBZ2 947 aa14.83□□□□□ -0.04
VARS-225ENST00000482996 TAF4BQ92750 862 aa14.83□□□□□ -0.04
VARS-225ENST00000482996 DNASE1L2Q92874 299 aa14.83□□□□□ -0.04
VARS-225ENST00000482996 IRF7Q92985 503 aa14.83□□□□□ -0.04
VARS-225ENST00000482996 MYLPFQ96A32 169 aa14.83□□□□□ -0.04
VARS-225ENST00000482996 TSG101Q99816 390 aa14.83□□□□□ -0.04
VARS-225ENST00000482996 TASP1Q9H6P5 420 aa14.83□□□□□ -0.04
VARS-225ENST00000482996 IL21Q9HBE4 155 aa14.83□□□□□ -0.04
VARS-225ENST00000482996 MAGED2Q9UNF1 606 aaPredicted RBP14.83□□□□□ -0.04
VARS-225ENST00000482996 HEPACAM2A8MVW5 462 aa14.82□□□□□ -0.04
VARS-225ENST00000482996 A8MXQ7 604 aa14.82□□□□□ -0.04
VARS-225ENST00000482996 CETN3O15182 167 aa14.82□□□□□ -0.04
VARS-225ENST00000482996 PI15O43692 258 aa14.82□□□□□ -0.04
VARS-225ENST00000482996 AKAP3O75969 853 aa14.82□□□□□ -0.04
VARS-225ENST00000482996 VNN1O95497 513 aa14.82□□□□□ -0.04
VARS-225ENST00000482996 HMGA1P17096 107 aaKnown RBP14.82□□□□□ -0.04
VARS-225ENST00000482996 DDX6P26196 483 aaKnown RBP eCLIP14.82□□□□□ -0.04
VARS-225ENST00000482996 GDI1P31150 447 aa14.82□□□□□ -0.04
VARS-225ENST00000482996 PIK3CAP42336 1068 aa14.82□□□□□ -0.04
VARS-225ENST00000482996 STARD6P59095 220 aa14.82□□□□□ -0.04
VARS-225ENST00000482996 CYP4F8P98187 520 aa14.82□□□□□ -0.04
VARS-225ENST00000482996 CYP27A1Q02318 531 aa14.82□□□□□ -0.04
VARS-225ENST00000482996 NHLH1Q02575 133 aa14.82□□□□□ -0.04
VARS-225ENST00000482996 SGSM1Q2NKQ1 1148 aa14.82□□□□□ -0.04
VARS-225ENST00000482996 ZCWPW2Q504Y3 356 aa14.82□□□□□ -0.04
VARS-225ENST00000482996 COBLL1Q53SF7 1204 aa14.82□□□□□ -0.04
VARS-225ENST00000482996 MDH1BQ5I0G3 518 aa14.82□□□□□ -0.04
VARS-225ENST00000482996 STXBP5Q5T5C0 1151 aa14.82□□□□□ -0.04
VARS-225ENST00000482996 SDHAF4Q5VUM1 108 aa14.82□□□□□ -0.04
VARS-225ENST00000482996 VITQ6UXI7 678 aa14.82□□□□□ -0.04
VARS-225ENST00000482996 SV2AQ7L0J3 742 aa14.82□□□□□ -0.04
VARS-225ENST00000482996 ARID3BQ8IVW6 561 aaPredicted RBP14.82□□□□□ -0.04
VARS-225ENST00000482996 ELOA2Q8IYF1 753 aaPredicted RBP14.82□□□□□ -0.04
VARS-225ENST00000482996 MRPS31Q92665 395 aaKnown RBP14.82□□□□□ -0.04
VARS-225ENST00000482996 IMPG2Q9BZV3 1241 aa14.82□□□□□ -0.04
VARS-225ENST00000482996 CRTAC1Q9NQ79 661 aa14.82□□□□□ -0.04
VARS-225ENST00000482996 SIT1Q9Y3P8 196 aa14.82□□□□□ -0.04
VARS-225ENST00000482996 PCDHA5Q9Y5H7 936 aa14.82□□□□□ -0.04
VARS-225ENST00000482996 KANSL1LA0AUZ9 987 aa14.81□□□□□ -0.04
VARS-225ENST00000482996 SLC38A8A6NNN8 435 aa14.81□□□□□ -0.04
VARS-225ENST00000482996 ZNF263O14978 683 aa14.81□□□□□ -0.04
VARS-225ENST00000482996 NOL4O94818 638 aa14.81□□□□□ -0.04
VARS-225ENST00000482996 HLA-DRAP01903 254 aa14.81□□□□□ -0.04
VARS-225ENST00000482996 TRIM49P0CI25 452 aa14.81□□□□□ -0.04
VARS-225ENST00000482996 TRIM49CP0CI26 452 aa14.81□□□□□ -0.04
VARS-225ENST00000482996 EPB41P11171 864 aaKnown RBP14.81□□□□□ -0.04
VARS-225ENST00000482996 PTPN1P18031 435 aaKnown RBP14.81□□□□□ -0.04
VARS-225ENST00000482996 BDNFP23560 247 aa14.81□□□□□ -0.04
VARS-225ENST00000482996 ANXA13P27216 316 aa14.81□□□□□ -0.04
VARS-225ENST00000482996 WEE1P30291 646 aa14.81□□□□□ -0.04
VARS-225ENST00000482996 GRIK1P39086 918 aa14.81□□□□□ -0.04
VARS-225ENST00000482996 PRCPP42785 496 aa14.81□□□□□ -0.04
VARS-225ENST00000482996 NLRP12P59046 1061 aa14.81□□□□□ -0.04
VARS-225ENST00000482996 TCF15Q12870 199 aa14.81□□□□□ -0.04
VARS-225ENST00000482996 STIM1Q13586 685 aa14.81□□□□□ -0.04
VARS-225ENST00000482996 SCARA5Q6ZMJ2 495 aa14.81□□□□□ -0.04
VARS-225ENST00000482996 CCDC105Q8IYK2 499 aa14.81□□□□□ -0.04
VARS-225ENST00000482996 SPATA20Q8TB22 786 aa14.81□□□□□ -0.04
VARS-225ENST00000482996 TRMT2BQ96GJ1 504 aaKnown RBP14.81□□□□□ -0.04
VARS-225ENST00000482996 PCED1BQ96HM7 432 aa14.81□□□□□ -0.04
VARS-225ENST00000482996 CEP295NLQ96MC4 621 aa14.81□□□□□ -0.04
VARS-225ENST00000482996 MKNK1Q9BUB5 465 aa14.81□□□□□ -0.04
VARS-225ENST00000482996 SMYD3Q9H7B4 428 aa14.81□□□□□ -0.04
VARS-225ENST00000482996 OBP2AQ9NY56 170 aa14.81□□□□□ -0.04
VARS-225ENST00000482996 CHMP5Q9NZZ3 219 aa14.81□□□□□ -0.04
VARS-225ENST00000482996 F5P12259 2224 aa14.81□□□□□ -0.04
VARS-225ENST00000482996 SOBPA7XYQ1 873 aa14.8□□□□□ -0.04
VARS-225ENST00000482996 TRIM66O15016 1216 aa14.8□□□□□ -0.04
VARS-225ENST00000482996 F11P03951 625 aa14.8□□□□□ -0.04
VARS-225ENST00000482996 AVPR1AP37288 418 aa14.8□□□□□ -0.04
VARS-225ENST00000482996 GCLMP48507 274 aa14.8□□□□□ -0.04
VARS-225ENST00000482996 CDH8P55286 799 aa14.8□□□□□ -0.04
VARS-225ENST00000482996 C1orf220Q5T0J3 134 aa14.8□□□□□ -0.04
VARS-225ENST00000482996 TPRG1Q6ZUI0 275 aa14.8□□□□□ -0.04
VARS-225ENST00000482996 DTWD2Q8NBA8 298 aa14.8□□□□□ -0.04
VARS-225ENST00000482996 B3GALNT2Q8NCR0 500 aa14.8□□□□□ -0.04
VARS-225ENST00000482996 CCDC150Q8NCX0 1101 aa14.8□□□□□ -0.04
VARS-225ENST00000482996 STKLD1Q8NE28 680 aa14.8□□□□□ -0.04
VARS-225ENST00000482996 PJA1Q8NG27 643 aa14.8□□□□□ -0.04
VARS-225ENST00000482996 ERCC4Q92889 916 aaPredicted RBP14.8□□□□□ -0.04
VARS-225ENST00000482996 TNIP3Q96KP6 325 aa14.8□□□□□ -0.04
VARS-225ENST00000482996 SPATA17Q96L03 361 aa14.8□□□□□ -0.04
VARS-225ENST00000482996 MYRFLQ96LU7 910 aa14.8□□□□□ -0.04
VARS-225ENST00000482996 DDX23Q9BUQ8 820 aaKnown RBP14.8□□□□□ -0.04
VARS-225ENST00000482996 FOXQ1Q9C009 403 aa14.8□□□□□ -0.04
VARS-225ENST00000482996 ELOVL4Q9GZR5 314 aa14.8□□□□□ -0.04
VARS-225ENST00000482996 TRPV5Q9NQA5 729 aa14.8□□□□□ -0.04
VARS-225ENST00000482996 HEBP1Q9NRV9 189 aa14.8□□□□□ -0.04
VARS-225ENST00000482996 EHD2Q9NZN4 543 aa14.8□□□□□ -0.04
VARS-225ENST00000482996 MRPS17Q9Y2R5 130 aaKnown RBP14.8□□□□□ -0.04
VARS-225ENST00000482996 ATP8B3O60423 1300 aa14.8□□□□□ -0.04
VARS-225ENST00000482996 MAN2B1O00754 1011 aa14.79□□□□□ -0.04
VARS-225ENST00000482996 PSMA7O14818 248 aa14.79□□□□□ -0.04
VARS-225ENST00000482996 CHADO15335 359 aa14.79□□□□□ -0.04
VARS-225ENST00000482996 STX10O60499 249 aa14.79□□□□□ -0.04
VARS-225ENST00000482996 GADD45BO75293 160 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms