RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 CD58P19256 250 aa9.35□□□□□ -0.91
SNX4-205ENST00000482965 TRIM21P19474 475 aaKnown RBP9.35□□□□□ -0.91
SNX4-205ENST00000482965 CYP2F1P24903 491 aa9.35□□□□□ -0.91
SNX4-205ENST00000482965 MTIF2P46199 727 aaKnown RBP9.35□□□□□ -0.91
SNX4-205ENST00000482965 NDST1P52848 882 aa9.35□□□□□ -0.91
SNX4-205ENST00000482965 RPL10AP62906 217 aaKnown RBP9.35□□□□□ -0.91
SNX4-205ENST00000482965 KCNH2Q12809 1159 aa9.35□□□□□ -0.91
SNX4-205ENST00000482965 STX1AQ16623 288 aa9.35□□□□□ -0.91
SNX4-205ENST00000482965 CFAP221Q4G0U5 840 aa9.35□□□□□ -0.91
SNX4-205ENST00000482965 UNC93AQ86WB7 457 aa9.35□□□□□ -0.91
SNX4-205ENST00000482965 SCN4BQ8IWT1 228 aa9.35□□□□□ -0.91
SNX4-205ENST00000482965 ZDHHC14Q8IZN3 488 aa9.35□□□□□ -0.91
SNX4-205ENST00000482965 HS6ST3Q8IZP7 471 aa9.35□□□□□ -0.91
SNX4-205ENST00000482965 LEMD2Q8NC56 503 aa9.35□□□□□ -0.91
SNX4-205ENST00000482965 ITFG1Q8TB96 612 aa9.35□□□□□ -0.91
SNX4-205ENST00000482965 MYCBPAPQ8TBZ2 947 aa9.35□□□□□ -0.91
SNX4-205ENST00000482965 GIPC2Q8TF65 315 aa9.35□□□□□ -0.91
SNX4-205ENST00000482965 ING5Q8WYH8 240 aa9.35□□□□□ -0.91
SNX4-205ENST00000482965 TATDN2Q93075 761 aa9.35□□□□□ -0.91
SNX4-205ENST00000482965 PCED1BQ96HM7 432 aa9.35□□□□□ -0.91
SNX4-205ENST00000482965 TNIP3Q96KP6 325 aa9.35□□□□□ -0.91
SNX4-205ENST00000482965 DNAI2Q9GZS0 605 aa9.35□□□□□ -0.91
SNX4-205ENST00000482965 THAP9Q9H5L6 903 aa9.35□□□□□ -0.91
SNX4-205ENST00000482965 AVENQ9NQS1 362 aaPredicted RBP9.35□□□□□ -0.91
SNX4-205ENST00000482965 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.35□□□□□ -0.91
SNX4-205ENST00000482965 LIMD1Q9UGP4 676 aa9.35□□□□□ -0.91
SNX4-205ENST00000482965 CDH7Q9ULB5 785 aa9.35□□□□□ -0.91
SNX4-205ENST00000482965 ATP8B3O60423 1300 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 PMM2O15305 246 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 CEBPBP17676 345 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 BDNFP23560 247 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 ANXA13P27216 316 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 GRIK1P39086 918 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 MAGEA11P43364 429 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 GPR15P49685 360 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 INCA1Q0VD86 236 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 LRMPQ12912 555 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 ORC1Q13415 861 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 DDR2Q16832 855 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 SLC5A9Q2M3M2 681 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 PRSS36Q5K4E3 855 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 SDHAF4Q5VUM1 108 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 VSTM1Q6UX27 236 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 DNAJB7Q7Z6W7 309 aaPredicted RBP9.34□□□□□ -0.91
SNX4-205ENST00000482965 ACOT1Q86TX2 421 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 TTC39CQ8N584 583 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 GPR152Q8TDT2 470 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 FGF13Q92913 245 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 PSMG2Q969U7 264 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 TCEAL4Q96EI5 215 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 FAXDC2Q96IV6 333 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 NT5C1BQ96P26 610 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 MED10Q9BTT4 135 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 NT5C1AQ9BXI3 368 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 ELOVL4Q9GZR5 314 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 EPS15L1Q9UBC2 864 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 HMGXB4Q9UGU5 601 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 MUTYHQ9UIF7 546 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 ZFP37Q9Y6Q3 630 aaPredicted RBP9.34□□□□□ -0.91
SNX4-205ENST00000482965 OBSL1O75147 1896 aa9.34□□□□□ -0.91
SNX4-205ENST00000482965 CLDN5O00501 218 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 TRIM66O15016 1216 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 DCXO43602 365 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 CILPO75339 1184 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 FGF19O95750 216 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 ASGR2P07307 311 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 CSH1P0DML2 217 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 CSH2P0DML3 217 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 LAMP2P13473 410 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 GJA1P17302 382 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 TBXAS1P24557 533 aaPredicted RBP9.33□□□□□ -0.92
SNX4-205ENST00000482965 GABRR2P28476 465 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 CCR2P41597 374 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 EPHA5P54756 1037 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 YWHAEP62258 255 aaKnown RBP9.33□□□□□ -0.92
SNX4-205ENST00000482965 TYRO3Q06418 890 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 CUL2Q13617 745 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 MAN2A1Q16706 1144 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 KLHL40Q2TBA0 621 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 HSP90AA4PQ58FG1 418 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 C11orf57Q6ZUT1 292 aaPredicted RBP9.33□□□□□ -0.92
SNX4-205ENST00000482965 FAM35AQ86V20 835 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 TMC8Q8IU68 726 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 IRF2BP1Q8IU81 584 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 NPAS3Q8IXF0 933 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 CRYBG2Q8N1P7 616 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 EHBP1Q8NDI1 1231 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 STKLD1Q8NE28 680 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 SHKBP1Q8TBC3 707 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 ENOX1Q8TC92 643 aaKnown RBP9.33□□□□□ -0.92
SNX4-205ENST00000482965 KHSRPQ92945 711 aaKnown RBP eCLIP9.33□□□□□ -0.92
SNX4-205ENST00000482965 MCRS1Q96EZ8 462 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 DCBLD2Q96PD2 775 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 GCNAQ96QF7 691 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 TWNKQ96RR1 684 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 ARID3AQ99856 593 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 LRRC3Q9BY71 257 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 B3GNT5Q9BYG0 378 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 ZNF518BQ9C0D4 1074 aa9.33□□□□□ -0.92
SNX4-205ENST00000482965 ZNF334Q9HCZ1 680 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms