RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 SGSM3Q96HU1 749 aa9.59□□□□□ -0.87
CALD1-220ENST00000482470 AGAP3Q96P47 875 aa9.59□□□□□ -0.87
CALD1-220ENST00000482470 NT5C1AQ9BXI3 368 aa9.59□□□□□ -0.87
CALD1-220ENST00000482470 PPP1R12CQ9BZL4 782 aa9.59□□□□□ -0.87
CALD1-220ENST00000482470 ST6GALNAC4Q9H4F1 302 aa9.59□□□□□ -0.87
CALD1-220ENST00000482470 PIH1D1Q9NWS0 290 aaKnown RBP9.59□□□□□ -0.87
CALD1-220ENST00000482470 G3BP2Q9UN86 482 aaKnown RBP9.59□□□□□ -0.87
CALD1-220ENST00000482470 ARL2BPQ9Y2Y0 163 aa9.59□□□□□ -0.87
CALD1-220ENST00000482470 DRG2P55039 364 aaKnown RBP9.59□□□□□ -0.87
CALD1-220ENST00000482470 TMPRSS15P98073 1019 aa9.59□□□□□ -0.87
CALD1-220ENST00000482470 TAP1Q03518 808 aa9.59□□□□□ -0.87
CALD1-220ENST00000482470 C15orf59Q2T9L4 293 aaPredicted RBP9.59□□□□□ -0.87
CALD1-220ENST00000482470 GOLGA7BQ2TAP0 167 aa9.59□□□□□ -0.87
CALD1-220ENST00000482470 UBAP2Q5T6F2 1119 aaKnown RBP9.59□□□□□ -0.87
CALD1-220ENST00000482470 ERMARDQ5T6L9 678 aa9.59□□□□□ -0.87
CALD1-220ENST00000482470 JADE1Q6IE81 842 aa9.59□□□□□ -0.87
CALD1-220ENST00000482470 ERO1BQ86YB8 467 aa9.59□□□□□ -0.87
CALD1-220ENST00000482470 MTMR14Q8NCE2 650 aa9.59□□□□□ -0.87
CALD1-220ENST00000482470 JOSD2Q8TAC2 188 aa9.59□□□□□ -0.87
CALD1-220ENST00000482470 KLC2Q9H0B6 622 aa9.59□□□□□ -0.87
CALD1-220ENST00000482470 LRRC4CQ9HCJ2 640 aa9.59□□□□□ -0.87
CALD1-220ENST00000482470 ABCF3Q9NUQ8 709 aa9.59□□□□□ -0.87
CALD1-220ENST00000482470 AFG3L2Q9Y4W6 797 aa9.59□□□□□ -0.87
CALD1-220ENST00000482470 SMCHD1A6NHR9 2005 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 PTPRJQ12913 1337 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 RPTORQ8N122 1335 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 IQANK1A0A1B0GTG1 560 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 ASB14A6NK59 587 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 RGS20O76081 388 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 MYL3P08590 195 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 WNT7BP56706 349 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 SARNPP82979 210 aaKnown RBP9.58□□□□□ -0.88
CALD1-220ENST00000482470 CYB5D1Q6P9G0 228 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 FASTKD5Q7L8L6 764 aaKnown RBP9.58□□□□□ -0.88
CALD1-220ENST00000482470 PCGF5Q86SE9 256 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 SCUBE3Q8IX30 993 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 NETO2Q8NC67 525 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 NLGN2Q8NFZ4 835 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 OR6J1Q8NGC5 347 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 OPTNQ96CV9 577 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 NTPCRQ9BSD7 190 aaKnown RBP9.58□□□□□ -0.88
CALD1-220ENST00000482470 DPP3Q9NY33 737 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 PNMA3Q9UL41 463 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 USP18Q9UMW8 372 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 ACKR2O00590 384 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 NDC80O14777 642 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 VNN1O95497 513 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 SLC25A27O95847 323 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 RASSF2P50749 326 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 NDST1P52848 882 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 AP1B1Q10567 949 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 MMRN1Q13201 1228 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 KCNV1Q6PIU1 500 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 NPNTQ6UXI9 565 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 ZPBP2Q6X784 338 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 SIX6OS1Q8N1H7 587 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 C12orf29Q8N999 325 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 REPS2Q8NFH8 660 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 MICAL1Q8TDZ2 1067 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 DHX33Q9H6R0 707 aaKnown RBP9.58□□□□□ -0.88
CALD1-220ENST00000482470 SMYD2Q9NRG4 433 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 ZDHHC18Q9NUE0 388 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 SETD4Q9NVD3 440 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 TJP2Q9UDY2 1190 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 MRPL42Q9Y6G3 142 aaKnown RBP9.58□□□□□ -0.88
CALD1-220ENST00000482470 SCN7AQ01118 1682 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 ARAP2Q8WZ64 1704 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.58□□□□□ -0.88
CALD1-220ENST00000482470 M0QZ92 97 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 IGF2BP3O00425 579 aaKnown RBP eCLIP9.58□□□□□ -0.88
CALD1-220ENST00000482470 ASS1P00966 412 aaKnown RBP9.58□□□□□ -0.88
CALD1-220ENST00000482470 NUDT17P0C025 328 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 GPD1P21695 349 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 ECHS1P30084 290 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 MIPP30301 263 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 SLC8A1P32418 973 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 VCPP55072 806 aaKnown RBP9.58□□□□□ -0.88
CALD1-220ENST00000482470 PTK6Q13882 451 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 FASTKD3Q14CZ7 662 aaKnown RBP9.58□□□□□ -0.88
CALD1-220ENST00000482470 CNGA2Q16280 664 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 MDH1BQ5I0G3 518 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 TXNRD3NBQ6F5E7 133 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 BEST2Q8NFU1 509 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 DEPDC1BQ8WUY9 529 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 TMEM176AQ96HP8 235 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 ACO2Q99798 780 aaKnown RBP9.58□□□□□ -0.88
CALD1-220ENST00000482470 UBN1Q9NPG3 1134 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 PSMC3IPQ9P2W1 217 aaPredicted RBP9.58□□□□□ -0.88
CALD1-220ENST00000482470 COQ4Q9Y3A0 265 aa9.58□□□□□ -0.88
CALD1-220ENST00000482470 DDX60LQ5H9U9 1706 aaKnown RBP9.58□□□□□ -0.88
CALD1-220ENST00000482470 ARHGAP42A6NI28 874 aa9.57□□□□□ -0.88
CALD1-220ENST00000482470 TGFB3P10600 412 aa9.57□□□□□ -0.88
CALD1-220ENST00000482470 UNGP13051 313 aaPredicted RBP9.57□□□□□ -0.88
CALD1-220ENST00000482470 DRD4P21917 467 aa9.57□□□□□ -0.88
CALD1-220ENST00000482470 AKAP5P24588 427 aa9.57□□□□□ -0.88
CALD1-220ENST00000482470 ADCYAP1R1P41586 468 aa9.57□□□□□ -0.88
CALD1-220ENST00000482470 NRLP54845 237 aa9.57□□□□□ -0.88
CALD1-220ENST00000482470 ANKRD20A8PQ5CZ79 823 aa9.57□□□□□ -0.88
CALD1-220ENST00000482470 NAIF1Q69YI7 327 aaPredicted RBP9.57□□□□□ -0.88
CALD1-220ENST00000482470 TMEM192Q8IY95 271 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms