RNA–Protein interactions for RNA: ENST00000482227.5

CNKSR1-207, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-207ENST00000482227 SNCAIPQ9Y6H5 919 aa16.28■□□□□ 0.2
CNKSR1-207ENST00000482227 A0A088AWK7 358 aa16.28■□□□□ 0.2
CNKSR1-207ENST00000482227 SMIM31A0A1B0GVY4 71 aa16.28■□□□□ 0.2
CNKSR1-207ENST00000482227 IFNB1P01574 187 aa16.28■□□□□ 0.2
CNKSR1-207ENST00000482227 MT-ND3P03897 115 aa16.28■□□□□ 0.2
CNKSR1-207ENST00000482227 UQCRBP14927 111 aa16.28■□□□□ 0.2
CNKSR1-207ENST00000482227 VCLP18206 1134 aa16.28■□□□□ 0.2
CNKSR1-207ENST00000482227 PHBP35232 272 aa16.28■□□□□ 0.2
CNKSR1-207ENST00000482227 NSFP46459 744 aaKnown RBP16.28■□□□□ 0.2
CNKSR1-207ENST00000482227 VCPP55072 806 aaKnown RBP16.28■□□□□ 0.2
CNKSR1-207ENST00000482227 PDE1BQ01064 536 aa16.28■□□□□ 0.2
CNKSR1-207ENST00000482227 R3HDM1Q15032 1099 aaKnown RBP16.28■□□□□ 0.2
CNKSR1-207ENST00000482227 KLHL38Q2WGJ6 581 aa16.28■□□□□ 0.2
CNKSR1-207ENST00000482227 LPCAT4Q643R3 524 aa16.28■□□□□ 0.2
CNKSR1-207ENST00000482227 KYAT3Q6YP21 454 aaKnown RBP16.28■□□□□ 0.2
CNKSR1-207ENST00000482227 DHDDSQ86SQ9 333 aa16.28■□□□□ 0.2
CNKSR1-207ENST00000482227 FBXO36Q8NEA4 188 aa16.28■□□□□ 0.2
CNKSR1-207ENST00000482227 PYDC1Q8WXC3 89 aa16.28■□□□□ 0.2
CNKSR1-207ENST00000482227 POMGNT1Q8WZA1 660 aa16.28■□□□□ 0.2
CNKSR1-207ENST00000482227 TRIM11Q96F44 468 aa16.28■□□□□ 0.2
CNKSR1-207ENST00000482227 APOPT1Q96IL0 206 aa16.28■□□□□ 0.2
CNKSR1-207ENST00000482227 FAM84AQ96KN4 292 aa16.28■□□□□ 0.2
CNKSR1-207ENST00000482227 C11orf70Q9BRQ4 267 aa16.28■□□□□ 0.2
CNKSR1-207ENST00000482227 EPB41L1Q9H4G0 881 aa16.28■□□□□ 0.2
CNKSR1-207ENST00000482227 SPECC1L-ADORA2AF8WAN1 911 aa16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 KLF11O14901 512 aa16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 FKBP6O75344 327 aa16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 STIP1P31948 543 aaKnown RBP16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 CPOXP36551 454 aa16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 MAGEA8P43361 318 aa16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 AQP4P55087 323 aa16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 SH3BGRP55822 239 aaPredicted RBP16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 UBXN2AP68543 259 aa16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 SLC18A2Q05940 514 aa16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 DEUP1Q05D60 604 aa16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 TBC1D10BQ4KMP7 808 aaPredicted RBP16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 DNAL1Q4LDG9 190 aa16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 CIAPIN1Q6FI81 312 aa16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 B3GNT9Q6UX72 402 aa16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 CDHR3Q6ZTQ4 885 aa16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 DNAJC1Q96KC8 554 aaKnown RBP16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 CCDC106Q9BWC9 280 aa16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 C17orf75Q9HAS0 396 aa16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 PCDH9Q9HC56 1237 aa16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 ADAMTS6Q9UKP5 1117 aa16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 ZNF510Q9Y2H8 683 aa16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 GMEB1Q9Y692 573 aa16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 MAPTP10636 758 aaKnown RBP16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 GTF2BQ00403 316 aa16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 ASPHQ12797 758 aa16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 MAP7Q14244 749 aa16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 HAUS6Q7Z4H7 955 aa16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 PRPF39Q86UA1 669 aaKnown RBP16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 RHPN2Q8IUC4 686 aa16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 CPT1BQ92523 772 aa16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 NKD2Q969F2 451 aaPredicted RBP16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 ZNF395Q9H8N7 513 aaPredicted RBP16.27■□□□□ 0.2
CNKSR1-207ENST00000482227 VILLO15195 856 aa16.26■□□□□ 0.19
CNKSR1-207ENST00000482227 ARP10275 920 aa16.26■□□□□ 0.19
CNKSR1-207ENST00000482227 ALCAMQ13740 583 aa16.26■□□□□ 0.19
CNKSR1-207ENST00000482227 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.26■□□□□ 0.19
CNKSR1-207ENST00000482227 AAGABQ6PD74 315 aa16.26■□□□□ 0.19
CNKSR1-207ENST00000482227 UGT2A3Q6UWM9 527 aa16.26■□□□□ 0.19
CNKSR1-207ENST00000482227 SV2AQ7L0J3 742 aa16.26■□□□□ 0.19
CNKSR1-207ENST00000482227 RCOR2Q8IZ40 523 aa16.26■□□□□ 0.19
CNKSR1-207ENST00000482227 AGBL1Q96MI9 1066 aa16.26■□□□□ 0.19
CNKSR1-207ENST00000482227 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.26■□□□□ 0.19
CNKSR1-207ENST00000482227 PRR5-ARHGAP8B1AHC4 643 aa16.26■□□□□ 0.19
CNKSR1-207ENST00000482227 SGK1O00141 431 aa16.26■□□□□ 0.19
CNKSR1-207ENST00000482227 TLR3O15455 904 aaKnown RBP16.26■□□□□ 0.19
CNKSR1-207ENST00000482227 ITGAVP06756 1048 aa16.26■□□□□ 0.19
CNKSR1-207ENST00000482227 SMIM18P0DKX4 95 aa16.26■□□□□ 0.19
CNKSR1-207ENST00000482227 ARHGAP8P85298 464 aa16.26■□□□□ 0.19
CNKSR1-207ENST00000482227 FAAP100Q0VG06 881 aa16.26■□□□□ 0.19
CNKSR1-207ENST00000482227 ZFPM1Q8IX07 1006 aa16.26■□□□□ 0.19
CNKSR1-207ENST00000482227 NAT8LQ8N9F0 302 aa16.26■□□□□ 0.19
CNKSR1-207ENST00000482227 DGCR14Q96DF8 476 aaKnown RBP16.26■□□□□ 0.19
CNKSR1-207ENST00000482227 MECRQ9BV79 373 aa16.26■□□□□ 0.19
CNKSR1-207ENST00000482227 C10orf88Q9H8K7 445 aa16.26■□□□□ 0.19
CNKSR1-207ENST00000482227 NYAP2Q9P242 653 aa16.26■□□□□ 0.19
CNKSR1-207ENST00000482227 GREB1LQ9C091 1923 aaPredicted RBP16.26■□□□□ 0.19
CNKSR1-207ENST00000482227 TCRBV7S3A2A0A539 114 aa16.25■□□□□ 0.19
CNKSR1-207ENST00000482227 E7ESA3 106 aa16.25■□□□□ 0.19
CNKSR1-207ENST00000482227 TMCC1O94876 653 aa16.25■□□□□ 0.19
CNKSR1-207ENST00000482227 PGM3O95394 542 aa16.25■□□□□ 0.19
CNKSR1-207ENST00000482227 PEX2P28328 305 aa16.25■□□□□ 0.19
CNKSR1-207ENST00000482227 GDF10P55107 478 aa16.25■□□□□ 0.19
CNKSR1-207ENST00000482227 GCNT1Q02742 428 aa16.25■□□□□ 0.19
CNKSR1-207ENST00000482227 MTMR2Q13614 643 aa16.25■□□□□ 0.19
CNKSR1-207ENST00000482227 PLEKHA7Q6IQ23 1121 aa16.25■□□□□ 0.19
CNKSR1-207ENST00000482227 FBXL19Q6PCT2 694 aa16.25■□□□□ 0.19
CNKSR1-207ENST00000482227 CCDC174Q6PII3 467 aa16.25■□□□□ 0.19
CNKSR1-207ENST00000482227 ARID3BQ8IVW6 561 aaPredicted RBP16.25■□□□□ 0.19
CNKSR1-207ENST00000482227 C1orf21Q9H246 121 aa16.25■□□□□ 0.19
CNKSR1-207ENST00000482227 RHBDL2Q9NX52 303 aa16.25■□□□□ 0.19
CNKSR1-207ENST00000482227 PTTG2Q9NZH5 202 aa16.25■□□□□ 0.19
CNKSR1-207ENST00000482227 PPME1Q9Y570 386 aa16.25■□□□□ 0.19
CNKSR1-207ENST00000482227 PCDHB2Q9Y5E7 798 aa16.25■□□□□ 0.19
CNKSR1-207ENST00000482227 IVNS1ABPQ9Y6Y0 642 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms