RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 TNRC6BQ9UPQ9 1833 aaKnown RBP16.15■□□□□ 0.18
HDAC6-224ENST00000481929 K7EQS6 105 aa16.15■□□□□ 0.18
HDAC6-224ENST00000481929 EPB41L2O43491 1005 aaKnown RBP16.15■□□□□ 0.18
HDAC6-224ENST00000481929 OBSL1O75147 1896 aa16.15■□□□□ 0.18
HDAC6-224ENST00000481929 CKMP06732 381 aa16.15■□□□□ 0.18
HDAC6-224ENST00000481929 USP17L7P0C7H9 530 aa16.15■□□□□ 0.18
HDAC6-224ENST00000481929 TNFSF9P41273 254 aa16.15■□□□□ 0.18
HDAC6-224ENST00000481929 SMTNP53814 917 aa16.15■□□□□ 0.18
HDAC6-224ENST00000481929 ORC2Q13416 577 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-224ENST00000481929 BYSLQ13895 437 aaKnown RBP16.15■□□□□ 0.18
HDAC6-224ENST00000481929 ZNF174Q15697 407 aa16.15■□□□□ 0.18
HDAC6-224ENST00000481929 KYAT1Q16773 422 aa16.15■□□□□ 0.18
HDAC6-224ENST00000481929 DUOXA1Q1HG43 343 aa16.15■□□□□ 0.18
HDAC6-224ENST00000481929 SPATA1Q5VX52 437 aa16.15■□□□□ 0.18
HDAC6-224ENST00000481929 PEAR1Q5VY43 1037 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-224ENST00000481929 EFCAB13Q8IY85 973 aa16.15■□□□□ 0.18
HDAC6-224ENST00000481929 CEP76Q8TAP6 659 aa16.15■□□□□ 0.18
HDAC6-224ENST00000481929 SNX29Q8TEQ0 813 aa16.15■□□□□ 0.18
HDAC6-224ENST00000481929 SPIRE2Q8WWL2 714 aa16.15■□□□□ 0.18
HDAC6-224ENST00000481929 BICD1Q96G01 975 aa16.15■□□□□ 0.18
HDAC6-224ENST00000481929 BBC3Q96PG8 261 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-224ENST00000481929 NTPCRQ9BSD7 190 aaKnown RBP16.15■□□□□ 0.18
HDAC6-224ENST00000481929 RUSC1Q9BVN2 902 aa16.15■□□□□ 0.18
HDAC6-224ENST00000481929 FSCN3Q9NQT6 498 aa16.15■□□□□ 0.18
HDAC6-224ENST00000481929 BCCIPQ9P287 314 aaKnown RBP eCLIP16.15■□□□□ 0.18
HDAC6-224ENST00000481929 UXTQ9UBK9 157 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-224ENST00000481929 LRWD1Q9UFC0 647 aa16.15■□□□□ 0.18
HDAC6-224ENST00000481929 PILRBQ9UKJ0 227 aa16.15■□□□□ 0.18
HDAC6-224ENST00000481929 DNM3Q9UQ16 869 aa16.15■□□□□ 0.18
HDAC6-224ENST00000481929 PTPRDP23468 1912 aa16.14■□□□□ 0.17
HDAC6-224ENST00000481929 TRAV19A0A0A6YYK7 116 aa16.14■□□□□ 0.17
HDAC6-224ENST00000481929 SFI1A8K8P3 1242 aa16.14■□□□□ 0.17
HDAC6-224ENST00000481929 E9PMD0 336 aa16.14■□□□□ 0.17
HDAC6-224ENST00000481929 NFATC1O95644 943 aa16.14■□□□□ 0.17
HDAC6-224ENST00000481929 ITPKAP23677 461 aa16.14■□□□□ 0.17
HDAC6-224ENST00000481929 FXR2P51116 673 aaKnown RBP eCLIP16.14■□□□□ 0.17
HDAC6-224ENST00000481929 MRPS21P82921 87 aaKnown RBP16.14■□□□□ 0.17
HDAC6-224ENST00000481929 C9orf57Q5W0N0 161 aa16.14■□□□□ 0.17
HDAC6-224ENST00000481929 RINT1Q6NUQ1 792 aa16.14■□□□□ 0.17
HDAC6-224ENST00000481929 TMEM92Q6UXU6 159 aa16.14■□□□□ 0.17
HDAC6-224ENST00000481929 LRRTM3Q86VH5 581 aa16.14■□□□□ 0.17
HDAC6-224ENST00000481929 DCP1BQ8IZD4 617 aaKnown RBP16.14■□□□□ 0.17
HDAC6-224ENST00000481929 MINDY1Q8N5J2 469 aa16.14■□□□□ 0.17
HDAC6-224ENST00000481929 TMEM161BQ8NDZ6 487 aa16.14■□□□□ 0.17
HDAC6-224ENST00000481929 STKLD1Q8NE28 680 aa16.14■□□□□ 0.17
HDAC6-224ENST00000481929 HNRNPLLQ8WVV9 542 aaKnown RBP16.14■□□□□ 0.17
HDAC6-224ENST00000481929 HAPLN2Q9GZV7 340 aa16.14■□□□□ 0.17
HDAC6-224ENST00000481929 RPF1Q9H9Y2 349 aaKnown RBP16.14■□□□□ 0.17
HDAC6-224ENST00000481929 POLMQ9NP87 494 aaPredicted RBP16.14■□□□□ 0.17
HDAC6-224ENST00000481929 KCNG1Q9UIX4 513 aa16.14■□□□□ 0.17
HDAC6-224ENST00000481929 PCDHB5Q9Y5E4 795 aa16.14■□□□□ 0.17
HDAC6-224ENST00000481929 STK24Q9Y6E0 443 aa16.14■□□□□ 0.17
HDAC6-224ENST00000481929 TADA3O75528 432 aa16.13■□□□□ 0.17
HDAC6-224ENST00000481929 SERPINF2P08697 491 aa16.13■□□□□ 0.17
HDAC6-224ENST00000481929 MAPTP10636 758 aaKnown RBP16.13■□□□□ 0.17
HDAC6-224ENST00000481929 HNRNPLP14866 589 aaKnown RBP eCLIP16.13■□□□□ 0.17
HDAC6-224ENST00000481929 OPRD1P41143 372 aa16.13■□□□□ 0.17
HDAC6-224ENST00000481929 TRIP6Q15654 476 aaKnown RBP16.13■□□□□ 0.17
HDAC6-224ENST00000481929 ENOX2Q16206 610 aaKnown RBP16.13■□□□□ 0.17
HDAC6-224ENST00000481929 JADE1Q6IE81 842 aa16.13■□□□□ 0.17
HDAC6-224ENST00000481929 CENPQQ7L2Z9 268 aaPredicted RBP16.13■□□□□ 0.17
HDAC6-224ENST00000481929 RABEPKQ7Z6M1 372 aa16.13■□□□□ 0.17
HDAC6-224ENST00000481929 FRMD1Q8N878 549 aa16.13■□□□□ 0.17
HDAC6-224ENST00000481929 GLIS3Q8NEA6 775 aa16.13■□□□□ 0.17
HDAC6-224ENST00000481929 SH3RF2Q8TEC5 729 aa16.13■□□□□ 0.17
HDAC6-224ENST00000481929 ADAMTS14Q8WXS8 1223 aa16.13■□□□□ 0.17
HDAC6-224ENST00000481929 FAM212AQ96EL1 285 aa16.13■□□□□ 0.17
HDAC6-224ENST00000481929 LRIG1Q96JA1 1093 aa16.13■□□□□ 0.17
HDAC6-224ENST00000481929 CYP2S1Q96SQ9 504 aa16.13■□□□□ 0.17
HDAC6-224ENST00000481929 PYM1Q9BRP8 204 aaKnown RBP16.13■□□□□ 0.17
HDAC6-224ENST00000481929 TIPINQ9BVW5 301 aa16.13■□□□□ 0.17
HDAC6-224ENST00000481929 MAST4O15021 2626 aa16.12■□□□□ 0.17
HDAC6-224ENST00000481929 ANTXRLA6NF34 631 aa16.12■□□□□ 0.17
HDAC6-224ENST00000481929 CYB561D2O14569 222 aa16.12■□□□□ 0.17
HDAC6-224ENST00000481929 AP5Z1O43299 807 aa16.12■□□□□ 0.17
HDAC6-224ENST00000481929 PRPF40AO75400 957 aaKnown RBP16.12■□□□□ 0.17
HDAC6-224ENST00000481929 KLF8O95600 359 aaPredicted RBP16.12■□□□□ 0.17
HDAC6-224ENST00000481929 PLS3P13797 630 aa16.12■□□□□ 0.17
HDAC6-224ENST00000481929 CD59P13987 128 aa16.12■□□□□ 0.17
HDAC6-224ENST00000481929 GPR15P49685 360 aa16.12■□□□□ 0.17
HDAC6-224ENST00000481929 SAFBQ15424 915 aaKnown RBP eCLIP16.12■□□□□ 0.17
HDAC6-224ENST00000481929 MAP7D1Q3KQU3 841 aa16.12■□□□□ 0.17
HDAC6-224ENST00000481929 HSF5Q4G112 596 aaPredicted RBP16.12■□□□□ 0.17
HDAC6-224ENST00000481929 CCNI2Q6ZMN8 369 aaPredicted RBP16.12■□□□□ 0.17
HDAC6-224ENST00000481929 C1orf186Q6ZWK4 172 aa16.12■□□□□ 0.17
HDAC6-224ENST00000481929 CD302Q8IX05 232 aa16.12■□□□□ 0.17
HDAC6-224ENST00000481929 PGBD3Q8N328 593 aa16.12■□□□□ 0.17
HDAC6-224ENST00000481929 ALLCQ8N6M5 410 aa16.12■□□□□ 0.17
HDAC6-224ENST00000481929 TXNDC5Q8NBS9 432 aaKnown RBP16.12■□□□□ 0.17
HDAC6-224ENST00000481929 HMGB4Q8WW32 186 aa16.12■□□□□ 0.17
HDAC6-224ENST00000481929 SLC22A12Q96S37 553 aa16.12■□□□□ 0.17
HDAC6-224ENST00000481929 PI4K2AQ9BTU6 479 aa16.12■□□□□ 0.17
HDAC6-224ENST00000481929 LINC00597Q9H2U6 94 aa16.12■□□□□ 0.17
HDAC6-224ENST00000481929 CAPN10Q9HC96 672 aa16.12■□□□□ 0.17
HDAC6-224ENST00000481929 SCUBE2Q9NQ36 999 aa16.12■□□□□ 0.17
HDAC6-224ENST00000481929 RAXQ9Y2V3 346 aa16.12■□□□□ 0.17
HDAC6-224ENST00000481929 PCDHB9Q9Y5E1 797 aa16.12■□□□□ 0.17
HDAC6-224ENST00000481929 ANK1P16157 1881 aa16.12■□□□□ 0.17
HDAC6-224ENST00000481929 ADAMTS9Q9P2N4 1935 aa16.11■□□□□ 0.17
HDAC6-224ENST00000481929 ASXL3Q9C0F0 2248 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms