RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 TWF1Q12792 350 aa11.31□□□□□ -0.6
SSBP1-210ENST00000481508 SGSM1Q2NKQ1 1148 aa11.31□□□□□ -0.6
SSBP1-210ENST00000481508 PUS10Q3MIT2 529 aaKnown RBP11.31□□□□□ -0.6
SSBP1-210ENST00000481508 TPGS2Q68CL5 300 aa11.31□□□□□ -0.6
SSBP1-210ENST00000481508 DPH6Q7L8W6 267 aa11.31□□□□□ -0.6
SSBP1-210ENST00000481508 GRASPQ7Z6J2 395 aaPredicted RBP11.31□□□□□ -0.6
SSBP1-210ENST00000481508 RNF135Q8IUD6 432 aa11.31□□□□□ -0.6
SSBP1-210ENST00000481508 TCEAL8Q8IYN2 117 aa11.31□□□□□ -0.6
SSBP1-210ENST00000481508 THEM5Q8N1Q8 247 aa11.31□□□□□ -0.6
SSBP1-210ENST00000481508 OR6B3Q8NGW1 331 aa11.31□□□□□ -0.6
SSBP1-210ENST00000481508 LMO3Q8TAP4 145 aa11.31□□□□□ -0.6
SSBP1-210ENST00000481508 ATOH1Q92858 354 aaPredicted RBP11.31□□□□□ -0.6
SSBP1-210ENST00000481508 PBXIP1Q96AQ6 731 aa11.31□□□□□ -0.6
SSBP1-210ENST00000481508 TWNKQ96RR1 684 aa11.31□□□□□ -0.6
SSBP1-210ENST00000481508 SYT15Q9BQS2 421 aa11.31□□□□□ -0.6
SSBP1-210ENST00000481508 ACBD6Q9BR61 282 aa11.31□□□□□ -0.6
SSBP1-210ENST00000481508 BCO2Q9BYV7 579 aa11.31□□□□□ -0.6
SSBP1-210ENST00000481508 METTL14Q9HCE5 456 aaKnown RBP11.31□□□□□ -0.6
SSBP1-210ENST00000481508 SAMSN1Q9NSI8 373 aaKnown RBP11.31□□□□□ -0.6
SSBP1-210ENST00000481508 CEP72Q9P209 647 aa11.31□□□□□ -0.6
SSBP1-210ENST00000481508 DNMT3BQ9UBC3 853 aaKnown RBP11.31□□□□□ -0.6
SSBP1-210ENST00000481508 GTF3C4Q9UKN8 822 aa11.31□□□□□ -0.6
SSBP1-210ENST00000481508 COQ4Q9Y3A0 265 aa11.31□□□□□ -0.6
SSBP1-210ENST00000481508 R3HCC1Q9Y3T6 440 aaKnown RBP11.31□□□□□ -0.6
SSBP1-210ENST00000481508 MYO16Q9Y6X6 1858 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 HNRNPA1P09651 372 aaKnown RBP eCLIP11.3□□□□□ -0.6
SSBP1-210ENST00000481508 HAPLN1P10915 354 aaPredicted RBP11.3□□□□□ -0.6
SSBP1-210ENST00000481508 ATF6P18850 670 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 HOXA9P31269 272 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 MTHFRP42898 656 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 ID4P47928 161 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 LHX1P48742 406 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 CACNA2D1P54289 1103 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 TYRO3Q06418 890 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 KCNH2Q12809 1159 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 LRMPQ12912 555 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 SLC5A9Q2M3M2 681 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 KLHL40Q2TBA0 621 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 ATAT1Q5SQI0 421 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 SDHAF4Q5VUM1 108 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 CES5AQ6NT32 575 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 FAM171BQ6P995 826 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 CCDC149Q6ZUS6 474 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 HS6ST3Q8IZP7 471 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 FBXL13Q8NEE6 735 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 ST13P5Q8NFI4 369 aaPredicted RBP11.3□□□□□ -0.6
SSBP1-210ENST00000481508 ITFG1Q8TB96 612 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 SPATA18Q8TC71 538 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 GPR152Q8TDT2 470 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 WHAMMQ8TF30 809 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 KAT5Q92993 513 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 MYLPFQ96A32 169 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 RPGRIP1Q96KN7 1286 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 FUCA2Q9BTY2 467 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 PHF7Q9BWX1 381 aaPredicted RBP11.3□□□□□ -0.6
SSBP1-210ENST00000481508 OXCT2Q9BYC2 517 aaPredicted RBP11.3□□□□□ -0.6
SSBP1-210ENST00000481508 NIF3L1Q9GZT8 377 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 SNX25Q9H3E2 840 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 WDR6Q9NNW5 1121 aaKnown RBP11.3□□□□□ -0.6
SSBP1-210ENST00000481508 TMEM30AQ9NV96 361 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 RAB20Q9NX57 234 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 ABI2Q9NYB9 513 aaPredicted RBP11.3□□□□□ -0.6
SSBP1-210ENST00000481508 CLUHO75153 1309 aa11.3□□□□□ -0.6
SSBP1-210ENST00000481508 PRR23AA6NEV1 266 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 C2CD4DB7Z1M9 353 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 LOC730098B7Z3J9 87 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 CLDN5O00501 218 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 STX10O60499 249 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 CYP2F1P24903 491 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 ELF1P32519 619 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 GNL1P36915 607 aaPredicted RBP11.29□□□□□ -0.6
SSBP1-210ENST00000481508 CCR2P41597 374 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 NDST1P52848 882 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 TSPY1Q01534 308 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 APBA1Q02410 837 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 STX1AQ16623 288 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 UVSSAQ2YD98 709 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 MGAT5BQ3V5L5 792 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 ARSIQ5FYB1 569 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 MDH1BQ5I0G3 518 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 SASS6Q6UVJ0 657 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 TRIM67Q6ZTA4 783 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 CREBRFQ8IUR6 639 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 ARHGEF19Q8IW93 802 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 SUGP1Q8IWZ8 645 aaKnown RBP11.29□□□□□ -0.6
SSBP1-210ENST00000481508 DCP1BQ8IZD4 617 aaKnown RBP11.29□□□□□ -0.6
SSBP1-210ENST00000481508 TAF4BQ92750 862 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 EDAQ92838 391 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 RIPOR3Q96MK2 946 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 MYADMQ96S97 322 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 SEPT5Q99719 369 aaPredicted RBP11.29□□□□□ -0.6
SSBP1-210ENST00000481508 LRRC3Q9BY71 257 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 ELOVL4Q9GZR5 314 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 HSD3B7Q9H2F3 369 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 THAP9Q9H5L6 903 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 PIDD1Q9HB75 910 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 ZNF334Q9HCZ1 680 aaPredicted RBP11.29□□□□□ -0.6
SSBP1-210ENST00000481508 PRKAG3Q9UGI9 489 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 CDH9Q9ULB4 789 aa11.29□□□□□ -0.6
SSBP1-210ENST00000481508 NFE2L3Q9Y4A8 694 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms