RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 MYRFLQ96LU7 910 aa14.29□□□□□ -0.12
PTPN7-212ENST00000480836 SMOC1Q9H4F8 434 aa14.29□□□□□ -0.12
PTPN7-212ENST00000480836 TMEM30AQ9NV96 361 aa14.29□□□□□ -0.12
PTPN7-212ENST00000480836 PANK4Q9NVE7 773 aa14.29□□□□□ -0.12
PTPN7-212ENST00000480836 INTS13Q9NVM9 706 aa14.29□□□□□ -0.12
PTPN7-212ENST00000480836 GDAP2Q9NXN4 497 aa14.29□□□□□ -0.12
PTPN7-212ENST00000480836 TFIP11Q9UBB9 837 aaKnown RBP14.29□□□□□ -0.12
PTPN7-212ENST00000480836 SEL1LQ9UBV2 794 aa14.29□□□□□ -0.12
PTPN7-212ENST00000480836 PRR5-ARHGAP8B1AHC4 643 aa14.28□□□□□ -0.12
PTPN7-212ENST00000480836 AXIN1O15169 862 aa14.28□□□□□ -0.12
PTPN7-212ENST00000480836 TGFB1I1O43294 461 aa14.28□□□□□ -0.12
PTPN7-212ENST00000480836 KRT37O76014 449 aa14.28□□□□□ -0.12
PTPN7-212ENST00000480836 KRT19P08727 400 aa14.28□□□□□ -0.12
PTPN7-212ENST00000480836 GJA4P35212 333 aa14.28□□□□□ -0.12
PTPN7-212ENST00000480836 CACNA2D1P54289 1103 aa14.28□□□□□ -0.12
PTPN7-212ENST00000480836 PSMC1P62191 440 aaKnown RBP14.28□□□□□ -0.12
PTPN7-212ENST00000480836 ARHGAP8P85298 464 aa14.28□□□□□ -0.12
PTPN7-212ENST00000480836 PLCB2Q00722 1185 aa14.28□□□□□ -0.12
PTPN7-212ENST00000480836 SF3A2Q15428 464 aaKnown RBP14.28□□□□□ -0.12
PTPN7-212ENST00000480836 TAF12Q16514 161 aa14.28□□□□□ -0.12
PTPN7-212ENST00000480836 CSRP2Q16527 193 aa14.28□□□□□ -0.12
PTPN7-212ENST00000480836 GAB4Q2WGN9 574 aa14.28□□□□□ -0.12
PTPN7-212ENST00000480836 ARL14EPQ8N8R7 260 aaPredicted RBP14.28□□□□□ -0.12
PTPN7-212ENST00000480836 NOC3LQ8WTT2 800 aaKnown RBP14.28□□□□□ -0.12
PTPN7-212ENST00000480836 LEO1Q8WVC0 666 aaPredicted RBP14.28□□□□□ -0.12
PTPN7-212ENST00000480836 ELMO3Q96BJ8 720 aa14.28□□□□□ -0.12
PTPN7-212ENST00000480836 ANAPC1Q9H1A4 1944 aa14.28□□□□□ -0.12
PTPN7-212ENST00000480836 CDV3Q9UKY7 258 aaKnown RBP14.28□□□□□ -0.12
PTPN7-212ENST00000480836 WNT6Q9Y6F9 365 aa14.28□□□□□ -0.12
PTPN7-212ENST00000480836 GREB1Q4ZG55 1949 aa14.27□□□□□ -0.12
PTPN7-212ENST00000480836 SLC30A4O14863 429 aa14.27□□□□□ -0.13
PTPN7-212ENST00000480836 TM4SF5O14894 197 aa14.27□□□□□ -0.13
PTPN7-212ENST00000480836 DCLK1O15075 740 aa14.27□□□□□ -0.13
PTPN7-212ENST00000480836 RNF40O75150 1001 aa14.27□□□□□ -0.13
PTPN7-212ENST00000480836 CSH1P0DML2 217 aa14.27□□□□□ -0.13
PTPN7-212ENST00000480836 CSH2P0DML3 217 aa14.27□□□□□ -0.13
PTPN7-212ENST00000480836 ABCD1P33897 745 aa14.27□□□□□ -0.13
PTPN7-212ENST00000480836 AVPR1AP37288 418 aa14.27□□□□□ -0.13
PTPN7-212ENST00000480836 MESP2Q0VG99 397 aa14.27□□□□□ -0.13
PTPN7-212ENST00000480836 SMARCB1Q12824 385 aa14.27□□□□□ -0.13
PTPN7-212ENST00000480836 PPP2R5DQ14738 602 aa14.27□□□□□ -0.13
PTPN7-212ENST00000480836 ZNF77Q15935 545 aa14.27□□□□□ -0.13
PTPN7-212ENST00000480836 NFE2Q16621 373 aaPredicted RBP14.27□□□□□ -0.13
PTPN7-212ENST00000480836 SFTPA1Q8IWL2 248 aa14.27□□□□□ -0.13
PTPN7-212ENST00000480836 SYCP3Q8IZU3 236 aa14.27□□□□□ -0.13
PTPN7-212ENST00000480836 GPD1LQ8N335 351 aa14.27□□□□□ -0.13
PTPN7-212ENST00000480836 SYNPOQ8N3V7 929 aa14.27□□□□□ -0.13
PTPN7-212ENST00000480836 LRRC52Q8N7C0 313 aa14.27□□□□□ -0.13
PTPN7-212ENST00000480836 TTC16Q8NEE8 873 aa14.27□□□□□ -0.13
PTPN7-212ENST00000480836 ZNF516Q92618 1163 aa14.27□□□□□ -0.13
PTPN7-212ENST00000480836 SECISBP2LQ93073 1101 aaKnown RBP14.27□□□□□ -0.13
PTPN7-212ENST00000480836 ZNF560Q96MR9 790 aa14.27□□□□□ -0.13
PTPN7-212ENST00000480836 MRPL45Q9BRJ2 306 aaKnown RBP14.27□□□□□ -0.13
PTPN7-212ENST00000480836 RTKNQ9BST9 563 aa14.27□□□□□ -0.13
PTPN7-212ENST00000480836 ARRDC1-AS1Q9H2J1 176 aa14.27□□□□□ -0.13
PTPN7-212ENST00000480836 THG1LQ9NWX6 298 aaKnown RBP14.27□□□□□ -0.13
PTPN7-212ENST00000480836 EXOC7Q9UPT5 735 aa14.27□□□□□ -0.13
PTPN7-212ENST00000480836 PCDHB13Q9Y5F0 798 aa14.27□□□□□ -0.13
PTPN7-212ENST00000480836 ZNF638Q14966 1978 aaKnown RBP14.27□□□□□ -0.13
PTPN7-212ENST00000480836 RALGAPA1Q6GYQ0 2036 aa14.26□□□□□ -0.13
PTPN7-212ENST00000480836 HUS1O60921 280 aa14.26□□□□□ -0.13
PTPN7-212ENST00000480836 PDGFRBP09619 1106 aa14.26□□□□□ -0.13
PTPN7-212ENST00000480836 CNR2P34972 360 aa14.26□□□□□ -0.13
PTPN7-212ENST00000480836 PNPLA4P41247 253 aa14.26□□□□□ -0.13
PTPN7-212ENST00000480836 STAT6P42226 847 aa14.26□□□□□ -0.13
PTPN7-212ENST00000480836 RAP1GAPP47736 663 aa14.26□□□□□ -0.13
PTPN7-212ENST00000480836 RBP5P82980 135 aa14.26□□□□□ -0.13
PTPN7-212ENST00000480836 TSPY1Q01534 308 aa14.26□□□□□ -0.13
PTPN7-212ENST00000480836 EML3Q32P44 896 aa14.26□□□□□ -0.13
PTPN7-212ENST00000480836 CFAP221Q4G0U5 840 aa14.26□□□□□ -0.13
PTPN7-212ENST00000480836 C1orf228Q6PIY5 440 aa14.26□□□□□ -0.13
PTPN7-212ENST00000480836 CCDC73Q6ZRK6 1079 aa14.26□□□□□ -0.13
PTPN7-212ENST00000480836 EPM2AIP1Q7L775 607 aaPredicted RBP14.26□□□□□ -0.13
PTPN7-212ENST00000480836 SCN4BQ8IWT1 228 aa14.26□□□□□ -0.13
PTPN7-212ENST00000480836 ADGRF2Q8IZF7 708 aa14.26□□□□□ -0.13
PTPN7-212ENST00000480836 TMEM86AQ8N2M4 240 aa14.26□□□□□ -0.13
PTPN7-212ENST00000480836 TOP6BLQ8N6T0 577 aa14.26□□□□□ -0.13
PTPN7-212ENST00000480836 RDH13Q8NBN7 331 aa14.26□□□□□ -0.13
PTPN7-212ENST00000480836 LINC00301Q8NCQ3 95 aa14.26□□□□□ -0.13
PTPN7-212ENST00000480836 MRPS31Q92665 395 aaKnown RBP14.26□□□□□ -0.13
PTPN7-212ENST00000480836 TRMT2BQ96GJ1 504 aaKnown RBP14.26□□□□□ -0.13
PTPN7-212ENST00000480836 GCNAQ96QF7 691 aa14.26□□□□□ -0.13
PTPN7-212ENST00000480836 HHIPQ96QV1 700 aa14.26□□□□□ -0.13
PTPN7-212ENST00000480836 RNF38Q9H0F5 515 aa14.26□□□□□ -0.13
PTPN7-212ENST00000480836 ECT2Q9H8V3 914 aa14.26□□□□□ -0.13
PTPN7-212ENST00000480836 TRPC7Q9HCX4 862 aa14.26□□□□□ -0.13
PTPN7-212ENST00000480836 ABCB6Q9NP58 842 aa14.26□□□□□ -0.13
PTPN7-212ENST00000480836 ITGA11Q9UKX5 1188 aa14.26□□□□□ -0.13
PTPN7-212ENST00000480836 RAB23Q9ULC3 237 aa14.26□□□□□ -0.13
PTPN7-212ENST00000480836 SCAMP3O14828 347 aaKnown RBP14.25□□□□□ -0.13
PTPN7-212ENST00000480836 LDHAP00338 332 aaKnown RBP14.25□□□□□ -0.13
PTPN7-212ENST00000480836 CHRM1P11229 460 aaPredicted RBP14.25□□□□□ -0.13
PTPN7-212ENST00000480836 HNRNPLP14866 589 aaKnown RBP eCLIP14.25□□□□□ -0.13
PTPN7-212ENST00000480836 BDNFP23560 247 aa14.25□□□□□ -0.13
PTPN7-212ENST00000480836 DDX6P26196 483 aaKnown RBP eCLIP14.25□□□□□ -0.13
PTPN7-212ENST00000480836 NASPP49321 788 aaPredicted RBP14.25□□□□□ -0.13
PTPN7-212ENST00000480836 FAM160A1Q05DH4 1040 aa14.25□□□□□ -0.13
PTPN7-212ENST00000480836 ZNF268Q14587 947 aaPredicted RBP14.25□□□□□ -0.13
PTPN7-212ENST00000480836 MTF1Q14872 753 aa14.25□□□□□ -0.13
PTPN7-212ENST00000480836 SHC4Q6S5L8 630 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms