RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 PEG10Q86TG7 708 aaKnown RBP6.41□□□□□ -1.38
CALD1-219ENST00000480638 TTC17Q96AE7 1141 aa6.41□□□□□ -1.38
CALD1-219ENST00000480638 PTDSS2Q9BVG9 487 aa6.41□□□□□ -1.38
CALD1-219ENST00000480638 ZNF518BQ9C0D4 1074 aa6.41□□□□□ -1.38
CALD1-219ENST00000480638 SLITRK6Q9H5Y7 841 aa6.41□□□□□ -1.38
CALD1-219ENST00000480638 SYNPO2LQ9H987 977 aa6.41□□□□□ -1.38
CALD1-219ENST00000480638 SERHLQ9NQF3 203 aa6.41□□□□□ -1.38
CALD1-219ENST00000480638 DDX21Q9NR30 783 aaKnown RBP eCLIP6.41□□□□□ -1.38
CALD1-219ENST00000480638 KLC4Q9NSK0 619 aa6.41□□□□□ -1.38
CALD1-219ENST00000480638 SACM1LQ9NTJ5 587 aa6.41□□□□□ -1.38
CALD1-219ENST00000480638 PCDHGB6Q9Y5F9 930 aa6.41□□□□□ -1.38
CALD1-219ENST00000480638 TRIM43BA6NCK2 446 aa6.4□□□□□ -1.38
CALD1-219ENST00000480638 PPM1DO15297 605 aa6.4□□□□□ -1.38
CALD1-219ENST00000480638 ERCC6LQ2NKX8 1250 aa6.4□□□□□ -1.38
CALD1-219ENST00000480638 DCAF12L1Q5VU92 463 aa6.4□□□□□ -1.38
CALD1-219ENST00000480638 RGS7BPQ6MZT1 257 aaPredicted RBP6.4□□□□□ -1.38
CALD1-219ENST00000480638 MICU3Q86XE3 530 aa6.4□□□□□ -1.38
CALD1-219ENST00000480638 GAS2L3Q86XJ1 694 aa6.4□□□□□ -1.38
CALD1-219ENST00000480638 ZNF280BQ86YH2 543 aa6.4□□□□□ -1.38
CALD1-219ENST00000480638 FKBP10Q96AY3 582 aa6.4□□□□□ -1.38
CALD1-219ENST00000480638 TRIM43Q96BQ3 446 aaPredicted RBP6.4□□□□□ -1.38
CALD1-219ENST00000480638 NMD3Q96D46 503 aaKnown RBP6.4□□□□□ -1.38
CALD1-219ENST00000480638 PBKQ96KB5 322 aa6.4□□□□□ -1.38
CALD1-219ENST00000480638 ALG8Q9BVK2 526 aa6.4□□□□□ -1.38
CALD1-219ENST00000480638 MS4A7Q9GZW8 240 aaPredicted RBP6.4□□□□□ -1.38
CALD1-219ENST00000480638 AFF4Q9UHB7 1163 aaKnown RBP6.4□□□□□ -1.38
CALD1-219ENST00000480638 SERTAD3Q9UJW9 196 aa6.4□□□□□ -1.38
CALD1-219ENST00000480638 OGDHLQ9ULD0 1010 aa6.4□□□□□ -1.38
CALD1-219ENST00000480638 NDRG4Q9ULP0 352 aaKnown RBP6.4□□□□□ -1.38
CALD1-219ENST00000480638 SSX2IPQ9Y2D8 614 aa6.4□□□□□ -1.38
CALD1-219ENST00000480638 MBD3L4A6NDZ8 208 aaPredicted RBP6.39□□□□□ -1.39
CALD1-219ENST00000480638 MBD3L3A6NE82 208 aaPredicted RBP6.39□□□□□ -1.39
CALD1-219ENST00000480638 KIF3BO15066 747 aa6.39□□□□□ -1.39
CALD1-219ENST00000480638 PDHA1P08559 390 aa6.39□□□□□ -1.39
CALD1-219ENST00000480638 LRPAP1P30533 357 aa6.39□□□□□ -1.39
CALD1-219ENST00000480638 GRIA3P42263 894 aa6.39□□□□□ -1.39
CALD1-219ENST00000480638 FMO1Q01740 532 aa6.39□□□□□ -1.39
CALD1-219ENST00000480638 SATB1Q01826 763 aa6.39□□□□□ -1.39
CALD1-219ENST00000480638 MYO1EQ12965 1108 aa6.39□□□□□ -1.39
CALD1-219ENST00000480638 EIF2B5Q13144 721 aaKnown RBP6.39□□□□□ -1.39
CALD1-219ENST00000480638 ZIK1Q3SY52 487 aaPredicted RBP6.39□□□□□ -1.39
CALD1-219ENST00000480638 HSP90AB2PQ58FF8 381 aa6.39□□□□□ -1.39
CALD1-219ENST00000480638 C3orf38Q5JPI3 329 aa6.39□□□□□ -1.39
CALD1-219ENST00000480638 SESTD1Q86VW0 696 aa6.39□□□□□ -1.39
CALD1-219ENST00000480638 SIMC1Q8NDZ2 872 aa6.39□□□□□ -1.39
CALD1-219ENST00000480638 OR56A3Q8NH54 315 aa6.39□□□□□ -1.39
CALD1-219ENST00000480638 RAPGEF4Q8WZA2 1011 aa6.39□□□□□ -1.39
CALD1-219ENST00000480638 KIAA1586Q9HCI6 787 aa6.39□□□□□ -1.39
CALD1-219ENST00000480638 CCDC151A5D8V7 595 aa6.38□□□□□ -1.39
CALD1-219ENST00000480638 hCG_1984214I3L0E3 225 aa6.38□□□□□ -1.39
CALD1-219ENST00000480638 KIAA0355O15063 1070 aa6.38□□□□□ -1.39
CALD1-219ENST00000480638 ORC4O43929 436 aa6.38□□□□□ -1.39
CALD1-219ENST00000480638 MAP4K4O95819 1239 aaPredicted RBP6.38□□□□□ -1.39
CALD1-219ENST00000480638 KLRC1P26715 233 aa6.38□□□□□ -1.39
CALD1-219ENST00000480638 CLK3P49761 638 aaKnown RBP6.38□□□□□ -1.39
CALD1-219ENST00000480638 RARRES1P49788 294 aa6.38□□□□□ -1.39
CALD1-219ENST00000480638 INHBEP58166 350 aa6.38□□□□□ -1.39
CALD1-219ENST00000480638 KRT17Q04695 432 aa6.38□□□□□ -1.39
CALD1-219ENST00000480638 E2F2Q14209 437 aa6.38□□□□□ -1.39
CALD1-219ENST00000480638 MGAT5BQ3V5L5 792 aa6.38□□□□□ -1.39
CALD1-219ENST00000480638 CAGE1Q8TC20 777 aa6.38□□□□□ -1.39
CALD1-219ENST00000480638 ATG4AQ8WYN0 398 aa6.38□□□□□ -1.39
CALD1-219ENST00000480638 RFKQ969G6 155 aa6.38□□□□□ -1.39
CALD1-219ENST00000480638 APOL5Q9BWW9 433 aa6.38□□□□□ -1.39
CALD1-219ENST00000480638 BTBD1Q9H0C5 482 aa6.38□□□□□ -1.39
CALD1-219ENST00000480638 CXorf36Q9H7Y0 433 aa6.38□□□□□ -1.39
CALD1-219ENST00000480638 ZNF287Q9HBT7 754 aa6.38□□□□□ -1.39
CALD1-219ENST00000480638 A1CFQ9NQ94 594 aaKnown RBP6.38□□□□□ -1.39
CALD1-219ENST00000480638 EHD3Q9NZN3 535 aa6.38□□□□□ -1.39
CALD1-219ENST00000480638 COL20A1Q9P218 1284 aa6.38□□□□□ -1.39
CALD1-219ENST00000480638 DKK3Q9UBP4 350 aa6.38□□□□□ -1.39
CALD1-219ENST00000480638 MRPS17Q9Y2R5 130 aaKnown RBP6.38□□□□□ -1.39
CALD1-219ENST00000480638 POLR2AP24928 1970 aaKnown RBP6.37□□□□□ -1.39
CALD1-219ENST00000480638 PYCARD-AS1I3L0S3 204 aa6.37□□□□□ -1.39
CALD1-219ENST00000480638 URI1O94763 535 aaPredicted RBP6.37□□□□□ -1.39
CALD1-219ENST00000480638 CSF1RP07333 972 aa6.37□□□□□ -1.39
CALD1-219ENST00000480638 ZKSCAN1P17029 563 aaPredicted RBP6.37□□□□□ -1.39
CALD1-219ENST00000480638 BMP5P22003 454 aa6.37□□□□□ -1.39
CALD1-219ENST00000480638 GNALP38405 381 aa6.37□□□□□ -1.39
CALD1-219ENST00000480638 RPS16P62249 146 aaKnown RBP6.37□□□□□ -1.39
CALD1-219ENST00000480638 SP2Q02086 613 aa6.37□□□□□ -1.39
CALD1-219ENST00000480638 TBCCQ15814 346 aa6.37□□□□□ -1.39
CALD1-219ENST00000480638 PLA1AQ53H76 456 aa6.37□□□□□ -1.39
CALD1-219ENST00000480638 TEDDM1Q5T9Z0 273 aa6.37□□□□□ -1.39
CALD1-219ENST00000480638 DTX2Q86UW9 622 aa6.37□□□□□ -1.39
CALD1-219ENST00000480638 KRT78Q8N1N4 520 aa6.37□□□□□ -1.39
CALD1-219ENST00000480638 SPSB4Q96A44 273 aa6.37□□□□□ -1.39
CALD1-219ENST00000480638 ZNHIT2Q9UHR6 403 aa6.37□□□□□ -1.39
CALD1-219ENST00000480638 TLK1Q9UKI8 766 aa6.37□□□□□ -1.39
CALD1-219ENST00000480638 ZAR1LA6NP61 321 aa6.36□□□□□ -1.39
CALD1-219ENST00000480638 LINC00473A8K010 186 aa6.36□□□□□ -1.39
CALD1-219ENST00000480638 ELFN1P0C7U0 828 aa6.36□□□□□ -1.39
CALD1-219ENST00000480638 NR2F6P10588 404 aa6.36□□□□□ -1.39
CALD1-219ENST00000480638 KCNA3P22001 575 aa6.36□□□□□ -1.39
CALD1-219ENST00000480638 PCSK6P29122 969 aa6.36□□□□□ -1.39
CALD1-219ENST00000480638 CLCN2P51788 898 aa6.36□□□□□ -1.39
CALD1-219ENST00000480638 DGKEP52429 567 aa6.36□□□□□ -1.39
CALD1-219ENST00000480638 ZNF618Q5T7W0 954 aa6.36□□□□□ -1.39
CALD1-219ENST00000480638 ZDHHC24Q6UX98 284 aa6.36□□□□□ -1.39
CALD1-219ENST00000480638 MAVSQ7Z434 540 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms