RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 PDXDC1Q6P996 788 aa13.05□□□□□ -0.32
TRA2B-212ENST00000480461 TMEM184AQ6ZMB5 413 aa13.05□□□□□ -0.32
TRA2B-212ENST00000480461 PAQR9Q6ZVX9 377 aa13.05□□□□□ -0.32
TRA2B-212ENST00000480461 CRYBG2Q8N1P7 616 aa13.05□□□□□ -0.32
TRA2B-212ENST00000480461 THEM5Q8N1Q8 247 aa13.05□□□□□ -0.32
TRA2B-212ENST00000480461 PPM1KQ8N3J5 372 aa13.05□□□□□ -0.32
TRA2B-212ENST00000480461 TTC9BQ8N6N2 239 aa13.05□□□□□ -0.32
TRA2B-212ENST00000480461 ATAD1Q8NBU5 361 aa13.05□□□□□ -0.32
TRA2B-212ENST00000480461 ZNF461Q8TAF7 563 aa13.05□□□□□ -0.32
TRA2B-212ENST00000480461 SPATA18Q8TC71 538 aa13.05□□□□□ -0.32
TRA2B-212ENST00000480461 NT5C1BQ96P26 610 aa13.05□□□□□ -0.32
TRA2B-212ENST00000480461 PGLYRP2Q96PD5 576 aa13.05□□□□□ -0.32
TRA2B-212ENST00000480461 ERGIC2Q96RQ1 377 aa13.05□□□□□ -0.32
TRA2B-212ENST00000480461 NAA15Q9BXJ9 866 aaKnown RBP13.05□□□□□ -0.32
TRA2B-212ENST00000480461 IMPG2Q9BZV3 1241 aa13.05□□□□□ -0.32
TRA2B-212ENST00000480461 SNX25Q9H3E2 840 aa13.05□□□□□ -0.32
TRA2B-212ENST00000480461 HCFC2Q9Y5Z7 792 aa13.05□□□□□ -0.32
TRA2B-212ENST00000480461 FAM186AA6NE01 2351 aa13.05□□□□□ -0.32
TRA2B-212ENST00000480461 A8MXQ7 604 aa13.04□□□□□ -0.32
TRA2B-212ENST00000480461 GALR2O43603 387 aaPredicted RBP13.04□□□□□ -0.32
TRA2B-212ENST00000480461 CILPO75339 1184 aa13.04□□□□□ -0.32
TRA2B-212ENST00000480461 SERPINC1P01008 464 aa13.04□□□□□ -0.32
TRA2B-212ENST00000480461 ADH1AP07327 375 aa13.04□□□□□ -0.32
TRA2B-212ENST00000480461 P4HA1P13674 534 aa13.04□□□□□ -0.32
TRA2B-212ENST00000480461 ATF2P15336 505 aa13.04□□□□□ -0.32
TRA2B-212ENST00000480461 PBX1P40424 430 aa13.04□□□□□ -0.32
TRA2B-212ENST00000480461 NUBP1P53384 320 aa13.04□□□□□ -0.32
TRA2B-212ENST00000480461 GCNT1Q02742 428 aa13.04□□□□□ -0.32
TRA2B-212ENST00000480461 SLC39A12Q504Y0 691 aa13.04□□□□□ -0.32
TRA2B-212ENST00000480461 ZNF394Q53GI3 561 aa13.04□□□□□ -0.32
TRA2B-212ENST00000480461 INTS6LQ5JSJ4 861 aaKnown RBP13.04□□□□□ -0.32
TRA2B-212ENST00000480461 ACOT1Q86TX2 421 aa13.04□□□□□ -0.32
TRA2B-212ENST00000480461 C12orf29Q8N999 325 aa13.04□□□□□ -0.32
TRA2B-212ENST00000480461 SLC4A11Q8NBS3 891 aa13.04□□□□□ -0.32
TRA2B-212ENST00000480461 CCDC150Q8NCX0 1101 aa13.04□□□□□ -0.32
TRA2B-212ENST00000480461 SUSD6Q92537 303 aa13.04□□□□□ -0.32
TRA2B-212ENST00000480461 ZSWIM1Q9BR11 485 aa13.04□□□□□ -0.32
TRA2B-212ENST00000480461 LSM14BQ9BX40 385 aaKnown RBP13.04□□□□□ -0.32
TRA2B-212ENST00000480461 B3GNT5Q9BYG0 378 aa13.04□□□□□ -0.32
TRA2B-212ENST00000480461 RHOBTB2Q9BYZ6 727 aa13.04□□□□□ -0.32
TRA2B-212ENST00000480461 GPR88Q9GZN0 384 aa13.04□□□□□ -0.32
TRA2B-212ENST00000480461 GANQ9H2C0 597 aa13.04□□□□□ -0.32
TRA2B-212ENST00000480461 PLCB1Q9NQ66 1216 aa13.04□□□□□ -0.32
TRA2B-212ENST00000480461 IFNKQ9P0W0 207 aa13.04□□□□□ -0.32
TRA2B-212ENST00000480461 APEX2Q9UBZ4 518 aa13.04□□□□□ -0.32
TRA2B-212ENST00000480461 DNAJC12Q9UKB3 198 aa13.04□□□□□ -0.32
TRA2B-212ENST00000480461 CDH9Q9ULB4 789 aa13.04□□□□□ -0.32
TRA2B-212ENST00000480461 CNTN6Q9UQ52 1028 aa13.04□□□□□ -0.32
TRA2B-212ENST00000480461 SLC27A5Q9Y2P5 690 aa13.04□□□□□ -0.32
TRA2B-212ENST00000480461 GVINP1Q7Z2Y8 2422 aa13.04□□□□□ -0.32
TRA2B-212ENST00000480461 ARHGEF37A1IGU5 675 aa13.03□□□□□ -0.32
TRA2B-212ENST00000480461 MTMR11A4FU01 709 aa13.03□□□□□ -0.32
TRA2B-212ENST00000480461 FOXN3O00409 490 aaPredicted RBP13.03□□□□□ -0.32
TRA2B-212ENST00000480461 SOAT2O75908 522 aa13.03□□□□□ -0.32
TRA2B-212ENST00000480461 CLSTN1O94985 981 aa13.03□□□□□ -0.32
TRA2B-212ENST00000480461 PNMA6AP0CW24 399 aaPredicted RBP13.03□□□□□ -0.32
TRA2B-212ENST00000480461 NBL1P41271 181 aa13.03□□□□□ -0.32
TRA2B-212ENST00000480461 UBASH3AP57075 661 aa13.03□□□□□ -0.32
TRA2B-212ENST00000480461 ADCY1Q08828 1119 aa13.03□□□□□ -0.32
TRA2B-212ENST00000480461 DUSP4Q13115 394 aa13.03□□□□□ -0.32
TRA2B-212ENST00000480461 SYCE2Q6PIF2 218 aa13.03□□□□□ -0.32
TRA2B-212ENST00000480461 UNC93AQ86WB7 457 aa13.03□□□□□ -0.32
TRA2B-212ENST00000480461 C12orf76Q8N812 135 aaPredicted RBP13.03□□□□□ -0.32
TRA2B-212ENST00000480461 KREMEN2Q8NCW0 462 aa13.03□□□□□ -0.32
TRA2B-212ENST00000480461 ANKRD20A12PQ8NF67 263 aa13.03□□□□□ -0.32
TRA2B-212ENST00000480461 MYCBPAPQ8TBZ2 947 aa13.03□□□□□ -0.32
TRA2B-212ENST00000480461 CDCA3Q99618 268 aaPredicted RBP13.03□□□□□ -0.32
TRA2B-212ENST00000480461 SYT15Q9BQS2 421 aa13.03□□□□□ -0.32
TRA2B-212ENST00000480461 OXCT2Q9BYC2 517 aaPredicted RBP13.03□□□□□ -0.32
TRA2B-212ENST00000480461 XPO4Q9C0E2 1151 aaKnown RBP13.03□□□□□ -0.32
TRA2B-212ENST00000480461 ACP6Q9NPH0 428 aa13.03□□□□□ -0.32
TRA2B-212ENST00000480461 FAM207AQ9NSI2 230 aaPredicted RBP13.03□□□□□ -0.32
TRA2B-212ENST00000480461 TMEM30AQ9NV96 361 aa13.03□□□□□ -0.32
TRA2B-212ENST00000480461 FHOD1Q9Y613 1164 aa13.03□□□□□ -0.32
TRA2B-212ENST00000480461 TSC2P49815 1807 aa13.03□□□□□ -0.32
TRA2B-212ENST00000480461 DNAH14Q0VDD8 3507 aa13.03□□□□□ -0.32
TRA2B-212ENST00000480461 CLDN5O00501 218 aa13.02□□□□□ -0.33
TRA2B-212ENST00000480461 RFPL2O75678 378 aa13.02□□□□□ -0.33
TRA2B-212ENST00000480461 GLUD1P00367 558 aa13.02□□□□□ -0.33
TRA2B-212ENST00000480461 C1RP00736 705 aa13.02□□□□□ -0.33
TRA2B-212ENST00000480461 CPB1P15086 417 aa13.02□□□□□ -0.33
TRA2B-212ENST00000480461 UCHL3P15374 230 aa13.02□□□□□ -0.33
TRA2B-212ENST00000480461 TBXAS1P24557 533 aaPredicted RBP13.02□□□□□ -0.33
TRA2B-212ENST00000480461 CYP2F1P24903 491 aa13.02□□□□□ -0.33
TRA2B-212ENST00000480461 PCSK1P29120 753 aa13.02□□□□□ -0.33
TRA2B-212ENST00000480461 ID4P47928 161 aa13.02□□□□□ -0.33
TRA2B-212ENST00000480461 ZNF132P52740 706 aa13.02□□□□□ -0.33
TRA2B-212ENST00000480461 CACNA2D1P54289 1103 aa13.02□□□□□ -0.33
TRA2B-212ENST00000480461 CREMQ03060 361 aa13.02□□□□□ -0.33
TRA2B-212ENST00000480461 ARHGAP44Q17R89 818 aa13.02□□□□□ -0.33
TRA2B-212ENST00000480461 MDH1BQ5I0G3 518 aa13.02□□□□□ -0.33
TRA2B-212ENST00000480461 FKBP15Q5T1M5 1219 aa13.02□□□□□ -0.33
TRA2B-212ENST00000480461 TPGS2Q68CL5 300 aa13.02□□□□□ -0.33
TRA2B-212ENST00000480461 TCEAL8Q8IYN2 117 aa13.02□□□□□ -0.33
TRA2B-212ENST00000480461 FUKQ8N0W3 1084 aa13.02□□□□□ -0.33
TRA2B-212ENST00000480461 B3GALNT2Q8NCR0 500 aa13.02□□□□□ -0.33
TRA2B-212ENST00000480461 TFAP2BQ92481 460 aa13.02□□□□□ -0.33
TRA2B-212ENST00000480461 PCED1BQ96HM7 432 aa13.02□□□□□ -0.33
TRA2B-212ENST00000480461 TMEM176AQ96HP8 235 aa13.02□□□□□ -0.33
TRA2B-212ENST00000480461 RIPOR3Q96MK2 946 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms