RNA–Protein interactions for RNA: ENST00000480226.5

ITGB1-212, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-212ENST00000480226 PPP1R32Q7Z5V6 425 aa5.35□□□□□ -1.55
ITGB1-212ENST00000480226 CHPFQ8IZ52 775 aa5.35□□□□□ -1.55
ITGB1-212ENST00000480226 ZBTB34Q8NCN2 500 aa5.35□□□□□ -1.55
ITGB1-212ENST00000480226 TSR2Q969E8 191 aaKnown RBP5.35□□□□□ -1.55
ITGB1-212ENST00000480226 NT5C1BQ96P26 610 aa5.35□□□□□ -1.55
ITGB1-212ENST00000480226 ARMT1Q9H993 441 aa5.35□□□□□ -1.55
ITGB1-212ENST00000480226 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.35□□□□□ -1.55
ITGB1-212ENST00000480226 A0A088AWK7 358 aa5.34□□□□□ -1.55
ITGB1-212ENST00000480226 A6NNZ2 444 aa5.34□□□□□ -1.55
ITGB1-212ENST00000480226 M0QYG6 137 aa5.34□□□□□ -1.55
ITGB1-212ENST00000480226 TSPAN6O43657 245 aa5.34□□□□□ -1.55
ITGB1-212ENST00000480226 JTBO76095 146 aa5.34□□□□□ -1.55
ITGB1-212ENST00000480226 HTR1BP28222 390 aa5.34□□□□□ -1.55
ITGB1-212ENST00000480226 TFF2Q03403 129 aa5.34□□□□□ -1.55
ITGB1-212ENST00000480226 FAM160B1Q5W0V3 765 aa5.34□□□□□ -1.55
ITGB1-212ENST00000480226 NXNQ6DKJ4 435 aa5.34□□□□□ -1.55
ITGB1-212ENST00000480226 CXorf57Q6NSI4 855 aaKnown RBP5.34□□□□□ -1.55
ITGB1-212ENST00000480226 ANKRD16Q6P6B7 361 aa5.34□□□□□ -1.55
ITGB1-212ENST00000480226 DENND1CQ8IV53 801 aa5.34□□□□□ -1.55
ITGB1-212ENST00000480226 TCEAL8Q8IYN2 117 aa5.34□□□□□ -1.55
ITGB1-212ENST00000480226 MAGEB6Q8N7X4 407 aa5.34□□□□□ -1.55
ITGB1-212ENST00000480226 CDK5RAP3Q96JB5 506 aa5.34□□□□□ -1.55
ITGB1-212ENST00000480226 MRGPRX1Q96LB2 322 aa5.34□□□□□ -1.55
ITGB1-212ENST00000480226 ZNF778Q96MU6 729 aa5.34□□□□□ -1.55
ITGB1-212ENST00000480226 KLHL42Q9P2K6 505 aa5.34□□□□□ -1.55
ITGB1-212ENST00000480226 ZNF70Q9UC06 446 aaPredicted RBP5.34□□□□□ -1.55
ITGB1-212ENST00000480226 TLR5O60602 858 aa5.33□□□□□ -1.56
ITGB1-212ENST00000480226 TUSC2O75896 110 aa5.33□□□□□ -1.56
ITGB1-212ENST00000480226 DNAJB5O75953 348 aa5.33□□□□□ -1.56
ITGB1-212ENST00000480226 RAB1AP62820 205 aa5.33□□□□□ -1.56
ITGB1-212ENST00000480226 TMEM119Q4V9L6 283 aa5.33□□□□□ -1.56
ITGB1-212ENST00000480226 EMC10Q5UCC4 262 aa5.33□□□□□ -1.56
ITGB1-212ENST00000480226 VPS53Q5VIR6 699 aa5.33□□□□□ -1.56
ITGB1-212ENST00000480226 ICE2Q659A1 982 aa5.33□□□□□ -1.56
ITGB1-212ENST00000480226 LAYNQ6UX15 382 aa5.33□□□□□ -1.56
ITGB1-212ENST00000480226 TMEM108Q6UXF1 575 aa5.33□□□□□ -1.56
ITGB1-212ENST00000480226 DTX2Q86UW9 622 aa5.33□□□□□ -1.56
ITGB1-212ENST00000480226 VGLL2Q8N8G2 317 aa5.33□□□□□ -1.56
ITGB1-212ENST00000480226 FAM46DQ8NEK8 389 aa5.33□□□□□ -1.56
ITGB1-212ENST00000480226 TBC1D5Q92609 795 aa5.33□□□□□ -1.56
ITGB1-212ENST00000480226 SEMA4CQ9C0C4 833 aa5.33□□□□□ -1.56
ITGB1-212ENST00000480226 STAP2Q9UGK3 403 aa5.33□□□□□ -1.56
ITGB1-212ENST00000480226 PCDHA6Q9UN73 950 aa5.33□□□□□ -1.56
ITGB1-212ENST00000480226 ZNF804BA4D1E1 1349 aa5.32□□□□□ -1.56
ITGB1-212ENST00000480226 PPM1DO15297 605 aa5.32□□□□□ -1.56
ITGB1-212ENST00000480226 SLC16A3O15427 465 aaKnown RBP5.32□□□□□ -1.56
ITGB1-212ENST00000480226 ONECUT2O95948 504 aa5.32□□□□□ -1.56
ITGB1-212ENST00000480226 AGFG1P52594 562 aaKnown RBP5.32□□□□□ -1.56
ITGB1-212ENST00000480226 EIF2B5Q13144 721 aaKnown RBP5.32□□□□□ -1.56
ITGB1-212ENST00000480226 CCDC157Q569K6 752 aa5.32□□□□□ -1.56
ITGB1-212ENST00000480226 AARS2Q5JTZ9 985 aaKnown RBP5.32□□□□□ -1.56
ITGB1-212ENST00000480226 ZNF425Q6IV72 752 aa5.32□□□□□ -1.56
ITGB1-212ENST00000480226 SWSAP1Q6NVH7 229 aa5.32□□□□□ -1.56
ITGB1-212ENST00000480226 SLC29A4Q7RTT9 530 aa5.32□□□□□ -1.56
ITGB1-212ENST00000480226 ZNF804AQ7Z570 1209 aa5.32□□□□□ -1.56
ITGB1-212ENST00000480226 WDR53Q7Z5U6 358 aaPredicted RBP5.32□□□□□ -1.56
ITGB1-212ENST00000480226 FANCBQ8NB91 859 aa5.32□□□□□ -1.56
ITGB1-212ENST00000480226 ATP6V0A4Q9HBG4 840 aa5.32□□□□□ -1.56
ITGB1-212ENST00000480226 SERHLQ9NQF3 203 aa5.32□□□□□ -1.56
ITGB1-212ENST00000480226 SH3BP4Q9P0V3 963 aa5.32□□□□□ -1.56
ITGB1-212ENST00000480226 SERGEFQ9UGK8 458 aa5.32□□□□□ -1.56
ITGB1-212ENST00000480226 DDX20Q9UHI6 824 aaKnown RBP5.32□□□□□ -1.56
ITGB1-212ENST00000480226 QSOX1O00391 747 aa5.31□□□□□ -1.56
ITGB1-212ENST00000480226 JUPP14923 745 aa5.31□□□□□ -1.56
ITGB1-212ENST00000480226 PCSK6P29122 969 aa5.31□□□□□ -1.56
ITGB1-212ENST00000480226 SOX8P57073 446 aa5.31□□□□□ -1.56
ITGB1-212ENST00000480226 MLC1Q15049 377 aa5.31□□□□□ -1.56
ITGB1-212ENST00000480226 LONRF3Q496Y0 759 aa5.31□□□□□ -1.56
ITGB1-212ENST00000480226 AMOTQ4VCS5 1084 aa5.31□□□□□ -1.56
ITGB1-212ENST00000480226 SLC44A4Q53GD3 710 aa5.31□□□□□ -1.56
ITGB1-212ENST00000480226 MTX3Q5HYI7 312 aa5.31□□□□□ -1.56
ITGB1-212ENST00000480226 NPNTQ6UXI9 565 aa5.31□□□□□ -1.56
ITGB1-212ENST00000480226 ZNF782Q6ZMW2 699 aaPredicted RBP5.31□□□□□ -1.56
ITGB1-212ENST00000480226 CERS3Q8IU89 383 aa5.31□□□□□ -1.56
ITGB1-212ENST00000480226 BRIX1Q8TDN6 353 aaKnown RBP5.31□□□□□ -1.56
ITGB1-212ENST00000480226 SLC46A1Q96NT5 459 aa5.31□□□□□ -1.56
ITGB1-212ENST00000480226 B3GNT5Q9BYG0 378 aa5.31□□□□□ -1.56
ITGB1-212ENST00000480226 ZMAT3Q9HA38 289 aaKnown RBP5.31□□□□□ -1.56
ITGB1-212ENST00000480226 HESX1Q9UBX0 185 aa5.31□□□□□ -1.56
ITGB1-212ENST00000480226 SH2B3Q9UQQ2 575 aa5.31□□□□□ -1.56
ITGB1-212ENST00000480226 ARID4BQ4LE39 1312 aaPredicted RBP5.3□□□□□ -1.56
ITGB1-212ENST00000480226 CTNND1O60716 968 aaKnown RBP5.3□□□□□ -1.56
ITGB1-212ENST00000480226 PDHA1P08559 390 aa5.3□□□□□ -1.56
ITGB1-212ENST00000480226 ATXN1LP0C7T5 689 aaKnown RBP5.3□□□□□ -1.56
ITGB1-212ENST00000480226 PRR35P0CG20 571 aa5.3□□□□□ -1.56
ITGB1-212ENST00000480226 PIM1P11309 404 aaPredicted RBP5.3□□□□□ -1.56
ITGB1-212ENST00000480226 NPR1P16066 1061 aa5.3□□□□□ -1.56
ITGB1-212ENST00000480226 CERS1P27544 350 aa5.3□□□□□ -1.56
ITGB1-212ENST00000480226 CYP2C18P33260 490 aa5.3□□□□□ -1.56
ITGB1-212ENST00000480226 LOXL3P58215 753 aa5.3□□□□□ -1.56
ITGB1-212ENST00000480226 PROSER3Q2NL68 480 aa5.3□□□□□ -1.56
ITGB1-212ENST00000480226 KHDC1LQ5JSQ8 128 aa5.3□□□□□ -1.56
ITGB1-212ENST00000480226 KIAA0319LQ8IZA0 1049 aa5.3□□□□□ -1.56
ITGB1-212ENST00000480226 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.3□□□□□ -1.56
ITGB1-212ENST00000480226 MOGAT1Q96PD6 335 aa5.3□□□□□ -1.56
ITGB1-212ENST00000480226 P2RX7Q99572 595 aaKnown RBP5.3□□□□□ -1.56
ITGB1-212ENST00000480226 TTYH3Q9C0H2 523 aa5.3□□□□□ -1.56
ITGB1-212ENST00000480226 NRIP3Q9NQ35 241 aa5.3□□□□□ -1.56
ITGB1-212ENST00000480226 CPA4Q9UI42 421 aa5.3□□□□□ -1.56
ITGB1-212ENST00000480226 DCLK1O15075 740 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms