RNA–Protein interactions for RNA: ENST00000479791.1

LYSMD4-206, Transcript of LysM domain containing 4, humanhuman

TSL 5

Gene LYSMD4, Length 3,001 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-206ENST00000479791 VAV1P15498 845 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 ECE1P42892 770 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 ITGA9Q13797 1035 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 CDC42EP5Q6NZY7 148 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 SPATA24Q86W54 205 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 RASSF3Q86WH2 238 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 MFSD14AQ96MC6 490 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 RIT2Q99578 217 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 WWP1Q9H0M0 922 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 GALNT8Q9NY28 637 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 IP6K2Q9UHH9 426 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 ZNF335Q9H4Z2 1342 aaPredicted RBP13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 SGK1O00141 431 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 DSG3P32926 999 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 NCKAP1LP55160 1127 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 ENPEPQ07075 957 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 FNBP1LQ5T0N5 605 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 PPP1R2P3Q6NXS1 205 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 PHF13Q86YI8 300 aaPredicted RBP13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 TRIM42Q8IWZ5 723 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 PALM2Q8IXS6 379 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 NAT8LQ8N9F0 302 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 FBXO36Q8NEA4 188 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 LZICQ8WZA0 190 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 CYTH2Q99418 400 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 SENP7Q9BQF6 1050 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 C11orf70Q9BRQ4 267 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 TMEM121Q9BTD3 319 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 EHMT1Q9H9B1 1298 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 PPME1Q9Y570 386 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 OPHN1O60890 802 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 IFNB1P01574 187 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 KRT1P04264 644 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 ASLP04424 464 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 SLURP2P0DP57 97 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 ARP10275 920 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 UQCRBP14927 111 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 ETS2P15036 469 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 RBM5P52756 815 aaKnown RBP eCLIP13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 MSS51Q4VC12 460 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 ATP13A4Q4VNC1 1196 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 SPOCD1Q6ZMY3 1216 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 RAPH1Q70E73 1250 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 DHDDSQ86SQ9 333 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 RHPN2Q8IUC4 686 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 FEZF2Q8TBJ5 459 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 RPGRQ92834 1020 aaKnown RBP13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 FBXL18Q96ME1 805 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 WDR83Q9BRX9 315 aaKnown RBP13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 PREBQ9HCU5 417 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 S100A14Q9HCY8 104 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 TOPORSQ9NS56 1045 aaPredicted RBP13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 C1orf112Q9NSG2 853 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 POLLQ9UGP5 575 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 CIDEBQ9UHD4 219 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 SSX2IPQ9Y2D8 614 aa13.61□□□□□ -0.23
LYSMD4-206ENST00000479791 CFBP00751 764 aa13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 P4HBP07237 508 aaKnown RBP13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 HARSP12081 509 aaKnown RBP13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 STIP1P31948 543 aaKnown RBP13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 RARRES1P49788 294 aa13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 NOMO3P69849 1222 aa13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 SHROOM1Q2M3G4 852 aaPredicted RBP13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 HSF5Q4G112 596 aaPredicted RBP13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 TFDP3Q5H9I0 405 aa13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 MAP3K21Q5TCX8 1036 aa13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 SLC35B2Q8TB61 432 aa13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 CPT1BQ92523 772 aa13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 SERAC1Q96JX3 654 aa13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 CLPTM1LQ96KA5 538 aa13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 PARVAQ9NVD7 372 aa13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 KLHL11Q9NVR0 708 aa13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 PPARGC1AQ9UBK2 798 aaKnown RBP13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 hCG_1818297A0A087WSY0 165 aa13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 E5RJQ4 531 aa13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 I3L4J1 428 aa13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 SLC16A4O15374 487 aa13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 AP1G1O43747 822 aa13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 CSDE1O75534 798 aaKnown RBP13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 USP1O94782 785 aa13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 VIL1P09327 827 aaKnown RBP13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 POLR2MP0CAP2 368 aa13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 RGS2P41220 211 aa13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 C1QBPQ07021 282 aaKnown RBP13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 PTK7Q13308 1070 aa13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 R3HDM1Q15032 1099 aaKnown RBP13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 ZFYVE27Q5T4F4 411 aa13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 TMEM179Q6ZVK1 233 aa13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 MIPOL1Q8TD10 442 aa13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 CCDC106Q9BWC9 280 aa13.6□□□□□ -0.23
LYSMD4-206ENST00000479791 PIAS1O75925 651 aa13.59□□□□□ -0.23
LYSMD4-206ENST00000479791 PLCB3Q01970 1234 aa13.59□□□□□ -0.23
LYSMD4-206ENST00000479791 KDSRQ06136 332 aa13.59□□□□□ -0.23
LYSMD4-206ENST00000479791 USP4Q13107 963 aa13.59□□□□□ -0.23
LYSMD4-206ENST00000479791 SLC44A1Q8WWI5 657 aa13.59□□□□□ -0.23
LYSMD4-206ENST00000479791 DGCR14Q96DF8 476 aaKnown RBP13.59□□□□□ -0.23
LYSMD4-206ENST00000479791 DNAAF2Q9NVR5 837 aaKnown RBP13.59□□□□□ -0.23
LYSMD4-206ENST00000479791 PTTG2Q9NZH5 202 aa13.59□□□□□ -0.23
LYSMD4-206ENST00000479791 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.59□□□□□ -0.23
LYSMD4-206ENST00000479791 SORCS3Q9UPU3 1222 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms