RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 ABCA3Q99758 1704 aa6.05□□□□□ -1.44
RFC4-212ENST00000479307 NEXMIFQ5QGS0 1516 aa6.04□□□□□ -1.44
RFC4-212ENST00000479307 THSD7AQ9UPZ6 1657 aa6.04□□□□□ -1.44
RFC4-212ENST00000479307 TRIM43BA6NCK2 446 aa6.04□□□□□ -1.44
RFC4-212ENST00000479307 DNAJB5O75953 348 aa6.04□□□□□ -1.44
RFC4-212ENST00000479307 RECQL4O94761 1208 aa6.04□□□□□ -1.44
RFC4-212ENST00000479307 SPATA31D3P0C874 917 aa6.04□□□□□ -1.44
RFC4-212ENST00000479307 PIM1P11309 404 aaPredicted RBP6.04□□□□□ -1.44
RFC4-212ENST00000479307 SLFN5Q08AF3 891 aa6.04□□□□□ -1.44
RFC4-212ENST00000479307 ZNF543Q08ER8 600 aa6.04□□□□□ -1.44
RFC4-212ENST00000479307 CRHR2Q13324 411 aa6.04□□□□□ -1.44
RFC4-212ENST00000479307 CNGB1Q14028 1251 aaPredicted RBP6.04□□□□□ -1.44
RFC4-212ENST00000479307 AMOTQ4VCS5 1084 aa6.04□□□□□ -1.44
RFC4-212ENST00000479307 NOMO2Q5JPE7 1267 aa6.04□□□□□ -1.44
RFC4-212ENST00000479307 Q6ZRM9 215 aa6.04□□□□□ -1.44
RFC4-212ENST00000479307 SPATA31D4Q6ZUB0 917 aa6.04□□□□□ -1.44
RFC4-212ENST00000479307 TTLL10Q6ZVT0 673 aa6.04□□□□□ -1.44
RFC4-212ENST00000479307 USP37Q86T82 979 aa6.04□□□□□ -1.44
RFC4-212ENST00000479307 SPICE1Q8N0Z3 855 aa6.04□□□□□ -1.44
RFC4-212ENST00000479307 OR2C3Q8N628 320 aa6.04□□□□□ -1.44
RFC4-212ENST00000479307 SLC17A8Q8NDX2 589 aa6.04□□□□□ -1.44
RFC4-212ENST00000479307 CXorf38Q8TB03 319 aa6.04□□□□□ -1.44
RFC4-212ENST00000479307 TRIM43Q96BQ3 446 aaPredicted RBP6.04□□□□□ -1.44
RFC4-212ENST00000479307 PHACTR3Q96KR7 559 aa6.04□□□□□ -1.44
RFC4-212ENST00000479307 SGCZQ96LD1 299 aa6.04□□□□□ -1.44
RFC4-212ENST00000479307 WWC2-AS2Q96NR7 200 aa6.04□□□□□ -1.44
RFC4-212ENST00000479307 MED15Q96RN5 788 aa6.04□□□□□ -1.44
RFC4-212ENST00000479307 COLEC11Q9BWP8 271 aa6.04□□□□□ -1.44
RFC4-212ENST00000479307 BRIP1Q9BX63 1249 aa6.04□□□□□ -1.44
RFC4-212ENST00000479307 IMPG2Q9BZV3 1241 aa6.04□□□□□ -1.44
RFC4-212ENST00000479307 RNPEPQ9H4A4 650 aa6.04□□□□□ -1.44
RFC4-212ENST00000479307 DEF6Q9H4E7 631 aa6.04□□□□□ -1.44
RFC4-212ENST00000479307 SMURF2Q9HAU4 748 aa6.04□□□□□ -1.44
RFC4-212ENST00000479307 STK32BQ9NY57 414 aa6.04□□□□□ -1.44
RFC4-212ENST00000479307 ADGRL2O95490 1459 aa6.03□□□□□ -1.44
RFC4-212ENST00000479307 XDHP47989 1333 aa6.03□□□□□ -1.44
RFC4-212ENST00000479307 K7ESM1 405 aa6.03□□□□□ -1.44
RFC4-212ENST00000479307 MYO1CO00159 1063 aa6.03□□□□□ -1.44
RFC4-212ENST00000479307 KPNA5O15131 536 aa6.03□□□□□ -1.44
RFC4-212ENST00000479307 TPD52L2O43399 206 aaKnown RBP6.03□□□□□ -1.44
RFC4-212ENST00000479307 UNC5CO95185 931 aa6.03□□□□□ -1.44
RFC4-212ENST00000479307 LDHAP00338 332 aaKnown RBP6.03□□□□□ -1.44
RFC4-212ENST00000479307 GRPP07492 148 aa6.03□□□□□ -1.44
RFC4-212ENST00000479307 SCNN1GP51170 649 aa6.03□□□□□ -1.44
RFC4-212ENST00000479307 PRKD1Q15139 912 aaPredicted RBP6.03□□□□□ -1.44
RFC4-212ENST00000479307 EZH2Q15910 746 aaKnown RBP6.03□□□□□ -1.44
RFC4-212ENST00000479307 CRB2Q5IJ48 1285 aa6.03□□□□□ -1.44
RFC4-212ENST00000479307 FAM160B1Q5W0V3 765 aa6.03□□□□□ -1.44
RFC4-212ENST00000479307 METRNLQ641Q3 311 aa6.03□□□□□ -1.44
RFC4-212ENST00000479307 PPP1R32Q7Z5V6 425 aa6.03□□□□□ -1.44
RFC4-212ENST00000479307 PCSK9Q8NBP7 692 aaKnown RBP6.03□□□□□ -1.44
RFC4-212ENST00000479307 PDPRQ8NCN5 879 aa6.03□□□□□ -1.44
RFC4-212ENST00000479307 DEPTORQ8TB45 409 aa6.03□□□□□ -1.44
RFC4-212ENST00000479307 MORC4Q8TE76 937 aa6.03□□□□□ -1.44
RFC4-212ENST00000479307 MAML1Q92585 1016 aa6.03□□□□□ -1.44
RFC4-212ENST00000479307 LOXL4Q96JB6 756 aa6.03□□□□□ -1.44
RFC4-212ENST00000479307 RIPOR3Q96MK2 946 aa6.03□□□□□ -1.44
RFC4-212ENST00000479307 ADOQ96SZ5 270 aa6.03□□□□□ -1.44
RFC4-212ENST00000479307 A1CFQ9NQ94 594 aaKnown RBP6.03□□□□□ -1.44
RFC4-212ENST00000479307 SERHLQ9NQF3 203 aa6.03□□□□□ -1.44
RFC4-212ENST00000479307 SACM1LQ9NTJ5 587 aa6.03□□□□□ -1.44
RFC4-212ENST00000479307 COL20A1Q9P218 1284 aa6.03□□□□□ -1.44
RFC4-212ENST00000479307 EIF2B4Q9UI10 523 aaKnown RBP6.03□□□□□ -1.44
RFC4-212ENST00000479307 NEU2Q9Y3R4 380 aa6.03□□□□□ -1.44
RFC4-212ENST00000479307 RGPD3A6NKT7 1758 aaPredicted RBP6.03□□□□□ -1.44
RFC4-212ENST00000479307 RGPD4Q7Z3J3 1758 aa6.03□□□□□ -1.44
RFC4-212ENST00000479307 IQGAP3Q86VI3 1631 aa6.03□□□□□ -1.44
RFC4-212ENST00000479307 A0A087WWL8 130 aa6.02□□□□□ -1.45
RFC4-212ENST00000479307 MBD3L4A6NDZ8 208 aaPredicted RBP6.02□□□□□ -1.45
RFC4-212ENST00000479307 MBD3L3A6NE82 208 aaPredicted RBP6.02□□□□□ -1.45
RFC4-212ENST00000479307 E9PLN8 166 aa6.02□□□□□ -1.45
RFC4-212ENST00000479307 M0QYG6 137 aa6.02□□□□□ -1.45
RFC4-212ENST00000479307 LEFTY2O00292 366 aa6.02□□□□□ -1.45
RFC4-212ENST00000479307 EIF3JO75822 258 aaKnown RBP6.02□□□□□ -1.45
RFC4-212ENST00000479307 PRSS23O95084 383 aa6.02□□□□□ -1.45
RFC4-212ENST00000479307 PARP1P09874 1014 aaKnown RBP6.02□□□□□ -1.45
RFC4-212ENST00000479307 CYP2C9P11712 490 aa6.02□□□□□ -1.45
RFC4-212ENST00000479307 FCER1AP12319 257 aa6.02□□□□□ -1.45
RFC4-212ENST00000479307 XRCC6P12956 609 aaKnown RBP eCLIP6.02□□□□□ -1.45
RFC4-212ENST00000479307 TSHRP16473 764 aa6.02□□□□□ -1.45
RFC4-212ENST00000479307 ACRV1P26436 265 aa6.02□□□□□ -1.45
RFC4-212ENST00000479307 APOBEC3AP31941 199 aaPredicted RBP6.02□□□□□ -1.45
RFC4-212ENST00000479307 STT3AP46977 705 aa6.02□□□□□ -1.45
RFC4-212ENST00000479307 SLC11A2P49281 568 aa6.02□□□□□ -1.45
RFC4-212ENST00000479307 WNT3P56703 355 aa6.02□□□□□ -1.45
RFC4-212ENST00000479307 ZNF844Q08AG5 666 aa6.02□□□□□ -1.45
RFC4-212ENST00000479307 CTBP1Q13363 440 aa6.02□□□□□ -1.45
RFC4-212ENST00000479307 RRP1BQ14684 758 aaKnown RBP6.02□□□□□ -1.45
RFC4-212ENST00000479307 TSHZ3Q63HK5 1081 aa6.02□□□□□ -1.45
RFC4-212ENST00000479307 MICU3Q86XE3 530 aa6.02□□□□□ -1.45
RFC4-212ENST00000479307 CFAP52Q8N1V2 620 aa6.02□□□□□ -1.45
RFC4-212ENST00000479307 CHST13Q8NET6 341 aa6.02□□□□□ -1.45
RFC4-212ENST00000479307 OR56A1Q8NGH5 318 aa6.02□□□□□ -1.45
RFC4-212ENST00000479307 BRI3BPQ8WY22 251 aa6.02□□□□□ -1.45
RFC4-212ENST00000479307 MOGAT1Q96PD6 335 aa6.02□□□□□ -1.45
RFC4-212ENST00000479307 NEU1Q99519 415 aa6.02□□□□□ -1.45
RFC4-212ENST00000479307 SMOQ99835 787 aa6.02□□□□□ -1.45
RFC4-212ENST00000479307 VKORC1Q9BQB6 163 aa6.02□□□□□ -1.45
RFC4-212ENST00000479307 SELENOOQ9BVL4 669 aa6.02□□□□□ -1.45
RFC4-212ENST00000479307 SPATA5L1Q9BVQ7 753 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms