RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 C2CD2LO14523 706 aa13.91□□□□□ -0.18
CHD3-210ENST00000479080 BEST1O76090 585 aa13.91□□□□□ -0.18
CHD3-210ENST00000479080 DNAJB2P25686 324 aa13.91□□□□□ -0.18
CHD3-210ENST00000479080 PCSK1P29120 753 aa13.91□□□□□ -0.18
CHD3-210ENST00000479080 ADORA2BP29275 332 aa13.91□□□□□ -0.18
CHD3-210ENST00000479080 CDH5P33151 784 aaPredicted RBP13.91□□□□□ -0.18
CHD3-210ENST00000479080 GPD2P43304 727 aa13.91□□□□□ -0.18
CHD3-210ENST00000479080 BPIFB4P59827 614 aa13.91□□□□□ -0.18
CHD3-210ENST00000479080 ROR1Q01973 937 aa13.91□□□□□ -0.18
CHD3-210ENST00000479080 RAB30Q15771 203 aa13.91□□□□□ -0.18
CHD3-210ENST00000479080 CNGA2Q16280 664 aa13.91□□□□□ -0.18
CHD3-210ENST00000479080 CLEC16AQ2KHT3 1053 aa13.91□□□□□ -0.18
CHD3-210ENST00000479080 SLC39A12Q504Y0 691 aa13.91□□□□□ -0.18
CHD3-210ENST00000479080 ANKS3Q6ZW76 656 aa13.91□□□□□ -0.18
CHD3-210ENST00000479080 FAM35AQ86V20 835 aa13.91□□□□□ -0.18
CHD3-210ENST00000479080 ZNF677Q86XU0 584 aa13.91□□□□□ -0.18
CHD3-210ENST00000479080 UBA3Q8TBC4 463 aa13.91□□□□□ -0.18
CHD3-210ENST00000479080 POF1BQ8WVV4 589 aa13.91□□□□□ -0.18
CHD3-210ENST00000479080 TNIP3Q96KP6 325 aa13.91□□□□□ -0.18
CHD3-210ENST00000479080 ZNHIT6Q9NWK9 470 aaKnown RBP13.91□□□□□ -0.18
CHD3-210ENST00000479080 TFR2Q9UP52 801 aa13.91□□□□□ -0.18
CHD3-210ENST00000479080 LZTS1Q9Y250 596 aa13.91□□□□□ -0.18
CHD3-210ENST00000479080 RWDD3Q9Y3V2 267 aa13.91□□□□□ -0.18
CHD3-210ENST00000479080 BZW2Q9Y6E2 419 aaKnown RBP13.91□□□□□ -0.18
CHD3-210ENST00000479080 MTMR11A4FU01 709 aa13.9□□□□□ -0.18
CHD3-210ENST00000479080 CARNS1A5YM72 827 aa13.9□□□□□ -0.18
CHD3-210ENST00000479080 HIDE1A8MVS5 230 aa13.9□□□□□ -0.18
CHD3-210ENST00000479080 EIF3CLB5ME19 914 aaKnown RBP13.9□□□□□ -0.18
CHD3-210ENST00000479080 H3BNC9 293 aa13.9□□□□□ -0.18
CHD3-210ENST00000479080 M0QYV0 167 aa13.9□□□□□ -0.18
CHD3-210ENST00000479080 ARHGAP6O43182 974 aa13.9□□□□□ -0.18
CHD3-210ENST00000479080 NDUFA10O95299 355 aa13.9□□□□□ -0.18
CHD3-210ENST00000479080 RB1P06400 928 aa13.9□□□□□ -0.18
CHD3-210ENST00000479080 SMAD3P84022 425 aaKnown RBP13.9□□□□□ -0.18
CHD3-210ENST00000479080 CYP27A1Q02318 531 aa13.9□□□□□ -0.18
CHD3-210ENST00000479080 PTP4A2Q12974 167 aa13.9□□□□□ -0.18
CHD3-210ENST00000479080 BMS1Q14692 1282 aaKnown RBP13.9□□□□□ -0.18
CHD3-210ENST00000479080 SLC18A3Q16572 532 aa13.9□□□□□ -0.18
CHD3-210ENST00000479080 LLGL2Q6P1M3 1020 aa13.9□□□□□ -0.18
CHD3-210ENST00000479080 RNF19BQ6ZMZ0 732 aa13.9□□□□□ -0.18
CHD3-210ENST00000479080 GPR65Q8IYL9 337 aa13.9□□□□□ -0.18
CHD3-210ENST00000479080 THEM5Q8N1Q8 247 aa13.9□□□□□ -0.18
CHD3-210ENST00000479080 C1orf131Q8NDD1 294 aaKnown RBP13.9□□□□□ -0.18
CHD3-210ENST00000479080 CCDC112Q8NEF3 446 aa13.9□□□□□ -0.18
CHD3-210ENST00000479080 FBXO22Q8NEZ5 403 aa13.9□□□□□ -0.18
CHD3-210ENST00000479080 EIF3CQ99613 913 aaKnown RBP13.9□□□□□ -0.18
CHD3-210ENST00000479080 SMOQ99835 787 aa13.9□□□□□ -0.18
CHD3-210ENST00000479080 PACSIN1Q9BY11 444 aa13.9□□□□□ -0.18
CHD3-210ENST00000479080 NAGPAQ9UK23 515 aa13.9□□□□□ -0.18
CHD3-210ENST00000479080 KIAA1257Q9ULG3 409 aa13.9□□□□□ -0.18
CHD3-210ENST00000479080 COLQQ9Y215 455 aaPredicted RBP13.9□□□□□ -0.18
CHD3-210ENST00000479080 CDY1Q9Y6F8 540 aa13.9□□□□□ -0.18
CHD3-210ENST00000479080 EPN1Q9Y6I3 576 aaPredicted RBP13.9□□□□□ -0.18
CHD3-210ENST00000479080 HHLA1C9JL84 531 aa13.89□□□□□ -0.19
CHD3-210ENST00000479080 H7C4K7 107 aa13.89□□□□□ -0.19
CHD3-210ENST00000479080 RFXAPO00287 272 aa13.89□□□□□ -0.19
CHD3-210ENST00000479080 TEX28O15482 410 aa13.89□□□□□ -0.19
CHD3-210ENST00000479080 LPXNO60711 386 aa13.89□□□□□ -0.19
CHD3-210ENST00000479080 CSPG5O95196 566 aa13.89□□□□□ -0.19
CHD3-210ENST00000479080 URODP06132 367 aa13.89□□□□□ -0.19
CHD3-210ENST00000479080 CNPP09543 421 aaKnown RBP13.89□□□□□ -0.19
CHD3-210ENST00000479080 CCDC172P0C7W6 258 aa13.89□□□□□ -0.19
CHD3-210ENST00000479080 TNFAIP3P21580 790 aa13.89□□□□□ -0.19
CHD3-210ENST00000479080 ANXA13P27216 316 aa13.89□□□□□ -0.19
CHD3-210ENST00000479080 GPR15P49685 360 aa13.89□□□□□ -0.19
CHD3-210ENST00000479080 CENPCQ03188 943 aa13.89□□□□□ -0.19
CHD3-210ENST00000479080 PDE4CQ08493 712 aa13.89□□□□□ -0.19
CHD3-210ENST00000479080 GPR17Q13304 367 aa13.89□□□□□ -0.19
CHD3-210ENST00000479080 PTPN20Q4JDL3 420 aa13.89□□□□□ -0.19
CHD3-210ENST00000479080 C2CD6Q53TS8 623 aa13.89□□□□□ -0.19
CHD3-210ENST00000479080 NAA35Q5VZE5 725 aa13.89□□□□□ -0.19
CHD3-210ENST00000479080 PPP2R2DQ66LE6 453 aa13.89□□□□□ -0.19
CHD3-210ENST00000479080 CLEC20AQ6ZU45 233 aa13.89□□□□□ -0.19
CHD3-210ENST00000479080 FMNL3Q8IVF7 1028 aa13.89□□□□□ -0.19
CHD3-210ENST00000479080 CCDC170Q8IYT3 715 aa13.89□□□□□ -0.19
CHD3-210ENST00000479080 ATAD1Q8NBU5 361 aa13.89□□□□□ -0.19
CHD3-210ENST00000479080 GDPD5Q8WTR4 605 aa13.89□□□□□ -0.19
CHD3-210ENST00000479080 SECISBP2LQ93073 1101 aaKnown RBP13.89□□□□□ -0.19
CHD3-210ENST00000479080 SAMD11Q96NU1 681 aa13.89□□□□□ -0.19
CHD3-210ENST00000479080 PGLYRP2Q96PD5 576 aa13.89□□□□□ -0.19
CHD3-210ENST00000479080 C11orf84Q9BUA3 381 aaPredicted RBP13.89□□□□□ -0.19
CHD3-210ENST00000479080 LHX5Q9H2C1 402 aa13.89□□□□□ -0.19
CHD3-210ENST00000479080 MSRAQ9UJ68 235 aa13.89□□□□□ -0.19
CHD3-210ENST00000479080 ADGRG1Q9Y653 693 aa13.89□□□□□ -0.19
CHD3-210ENST00000479080 PTPRDP23468 1912 aa13.89□□□□□ -0.19
CHD3-210ENST00000479080 CDH23Q9H251 3354 aa13.88□□□□□ -0.19
CHD3-210ENST00000479080 SOX1O00570 391 aaPredicted RBP13.88□□□□□ -0.19
CHD3-210ENST00000479080 SEC24AO95486 1093 aa13.88□□□□□ -0.19
CHD3-210ENST00000479080 ABL1P00519 1130 aa13.88□□□□□ -0.19
CHD3-210ENST00000479080 BDNFP23560 247 aa13.88□□□□□ -0.19
CHD3-210ENST00000479080 OR1D2P34982 312 aa13.88□□□□□ -0.19
CHD3-210ENST00000479080 ARPP19P56211 112 aa13.88□□□□□ -0.19
CHD3-210ENST00000479080 TSPY1Q01534 308 aa13.88□□□□□ -0.19
CHD3-210ENST00000479080 KRT17Q04695 432 aa13.88□□□□□ -0.19
CHD3-210ENST00000479080 UBE3AQ05086 875 aa13.88□□□□□ -0.19
CHD3-210ENST00000479080 GPM6BQ13491 265 aa13.88□□□□□ -0.19
CHD3-210ENST00000479080 TSR1Q2NL82 804 aaKnown RBP13.88□□□□□ -0.19
CHD3-210ENST00000479080 PLPP4Q5VZY2 271 aa13.88□□□□□ -0.19
CHD3-210ENST00000479080 MON1BQ7L1V2 547 aa13.88□□□□□ -0.19
CHD3-210ENST00000479080 GPRIN1Q7Z2K8 1008 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms