RNA–Protein interactions for RNA: ENST00000478954.1

STRADBP1-201, Transcript of STE20-related kinase adaptor beta pseudogene 1, humanhuman

BASIC

Gene STRADBP1, Length 1,281 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBP1-201ENST00000478954 SNX33Q8WV41 574 aa6.54□□□□□ -1.36
STRADBP1-201ENST00000478954 TACO1Q9BSH4 297 aaKnown RBP6.54□□□□□ -1.36
STRADBP1-201ENST00000478954 MRPL46Q9H2W6 279 aaKnown RBP6.54□□□□□ -1.36
STRADBP1-201ENST00000478954 PRO3102Q9H379 93 aa6.54□□□□□ -1.36
STRADBP1-201ENST00000478954 MANSC1Q9H8J5 431 aa6.54□□□□□ -1.36
STRADBP1-201ENST00000478954 SARS2Q9NP81 518 aaKnown RBP6.54□□□□□ -1.36
STRADBP1-201ENST00000478954 POLR3BQ9NW08 1133 aaPredicted RBP6.54□□□□□ -1.36
STRADBP1-201ENST00000478954 LRFN1Q9P244 771 aa6.54□□□□□ -1.36
STRADBP1-201ENST00000478954 AFF4Q9UHB7 1163 aaKnown RBP6.54□□□□□ -1.36
STRADBP1-201ENST00000478954 FEZ2Q9UHY8 353 aaPredicted RBP6.54□□□□□ -1.36
STRADBP1-201ENST00000478954 POLR2AP24928 1970 aaKnown RBP6.54□□□□□ -1.36
STRADBP1-201ENST00000478954 COL11A2P13942 1736 aaPredicted RBP6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 MYBBP1AQ9BQG0 1328 aaKnown RBP6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 ADAMTS20P59510 1910 aa6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 GOLGA6L3A6NEY3 463 aa6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 DBX1A6NMT0 343 aa6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 BTBD11A6QL63 1104 aa6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 F2RL2O00254 374 aa6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 EIF3FO00303 357 aaPredicted RBP6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 POLRMTO00411 1230 aaKnown RBP6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 WNT10BO00744 389 aa6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 PRAMEF4O60810 478 aa6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 CNOT4O95628 575 aaKnown RBP6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 HDCP19113 662 aa6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 ECHS1P30084 290 aa6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 ITGA8P53708 1063 aa6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 ATP8B2P98198 1209 aa6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 MEF2AQ02078 507 aaPredicted RBP6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 FKBP15Q5T1M5 1219 aa6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 INTS11Q5TA45 600 aaKnown RBP6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 FAM180AQ6UWF9 173 aa6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 CD300LDQ6UXZ3 194 aa6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 GADL1Q6ZQY3 521 aa6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 NAXEQ8NCW5 288 aa6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 GIMAP8Q8ND71 665 aaPredicted RBP6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 DACT3Q96B18 629 aaPredicted RBP6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 NMD3Q96D46 503 aaKnown RBP6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 GDF15Q99988 308 aa6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 GORASP1Q9BQQ3 440 aa6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 HEPHQ9BQS7 1158 aa6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 C1orf43Q9BWL3 253 aa6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 TRIM54Q9BYV2 358 aa6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 WDCPQ9H6R7 721 aa6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 SMURF2Q9HAU4 748 aa6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 PIH1D1Q9NWS0 290 aaKnown RBP6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 DACT1Q9NYF0 836 aa6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 SLC39A10Q9ULF5 831 aa6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 CRYL1Q9Y2S2 319 aa6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 EYSQ5T1H1 3165 aa6.53□□□□□ -1.36
STRADBP1-201ENST00000478954 ARFGEF2Q9Y6D5 1785 aa6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 DYTNA2CJ06 578 aa6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 hCG_1984214I3L0E3 225 aa6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 ACKR2O00590 384 aa6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 NUAK1O60285 661 aa6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 SNX2O60749 519 aa6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 GAAP10253 952 aa6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 ARL4CP56559 192 aa6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 NKX3-2P78367 333 aa6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 DLX2Q07687 328 aaPredicted RBP6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 G3BP1Q13283 466 aaKnown RBP eCLIP6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 ADAM9Q13443 819 aa6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 PRKG1Q13976 671 aa6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 VMACQ2NL98 169 aa6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 CNKSR3Q6P9H4 555 aa6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 FBXO46Q6PJ61 603 aaPredicted RBP6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 LRRC56Q8IYG6 542 aaPredicted RBP6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 SYNE4Q8N205 404 aa6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 PQLC1Q8N2U9 271 aa6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 LILRA3Q8N6C8 439 aaPredicted RBP6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 WDR48Q8TAF3 677 aa6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 FNIP1Q8TF40 1166 aa6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 NKD2Q969F2 451 aaPredicted RBP6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 MUL1Q969V5 352 aa6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 SUCLG2Q96I99 432 aa6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 PWWP2AQ96N64 755 aa6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 OSBPL6Q9BZF3 934 aa6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 DLL4Q9NR61 685 aa6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 VPS45Q9NRW7 570 aa6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 GGA3Q9NZ52 723 aa6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 ARHGAP20Q9P2F6 1191 aa6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 TRPS1Q9UHF7 1281 aa6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 MAN2B2Q9Y2E5 1009 aa6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 MUC6Q6W4X9 2439 aa6.52□□□□□ -1.37
STRADBP1-201ENST00000478954 AQP12BA6NM10 295 aa6.51□□□□□ -1.37
STRADBP1-201ENST00000478954 H0Y858 1186 aa6.51□□□□□ -1.37
STRADBP1-201ENST00000478954 TRIM38O00635 465 aa6.51□□□□□ -1.37
STRADBP1-201ENST00000478954 ADCY6O43306 1168 aa6.51□□□□□ -1.37
STRADBP1-201ENST00000478954 PHF2O75151 1096 aa6.51□□□□□ -1.37
STRADBP1-201ENST00000478954 RNASEH2AO75792 299 aaKnown RBP6.51□□□□□ -1.37
STRADBP1-201ENST00000478954 CELF2O95319 508 aaKnown RBP6.51□□□□□ -1.37
STRADBP1-201ENST00000478954 CYP2C8P10632 490 aa6.51□□□□□ -1.37
STRADBP1-201ENST00000478954 DDCP20711 480 aa6.51□□□□□ -1.37
STRADBP1-201ENST00000478954 PCSK1P29120 753 aa6.51□□□□□ -1.37
STRADBP1-201ENST00000478954 RFC4P35249 363 aa6.51□□□□□ -1.37
STRADBP1-201ENST00000478954 SERPINF1P36955 418 aa6.51□□□□□ -1.37
STRADBP1-201ENST00000478954 ADCY8P40145 1251 aa6.51□□□□□ -1.37
STRADBP1-201ENST00000478954 PER3P56645 1201 aa6.51□□□□□ -1.37
STRADBP1-201ENST00000478954 SOX8P57073 446 aa6.51□□□□□ -1.37
STRADBP1-201ENST00000478954 RTP5Q14D33 572 aa6.51□□□□□ -1.37
STRADBP1-201ENST00000478954 MAN2A1Q16706 1144 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms