RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 SSU72Q9NP77 194 aaKnown RBP22.22■■□□□ 1.15
SDF4-206ENST00000478938 SLC38A7Q9NVC3 462 aa22.22■■□□□ 1.15
SDF4-206ENST00000478938 TRMT112Q9UI30 125 aaKnown RBP22.22■■□□□ 1.15
SDF4-206ENST00000478938 SOX13Q9UN79 622 aa22.22■■□□□ 1.15
SDF4-206ENST00000478938 GPC6Q9Y625 555 aaPredicted RBP22.22■■□□□ 1.15
SDF4-206ENST00000478938 MAD1L1Q9Y6D9 718 aa22.22■■□□□ 1.15
SDF4-206ENST00000478938 A0A1B0GUL6 1792 aa22.22■■□□□ 1.15
SDF4-206ENST00000478938 SPATA31A1Q5TZJ5 1347 aa22.22■■□□□ 1.15
SDF4-206ENST00000478938 H3BNX3 289 aa22.22■■□□□ 1.15
SDF4-206ENST00000478938 EIF3FO00303 357 aaPredicted RBP22.22■■□□□ 1.15
SDF4-206ENST00000478938 PDXKO00764 312 aa22.22■■□□□ 1.15
SDF4-206ENST00000478938 TM9SF1O15321 606 aa22.22■■□□□ 1.15
SDF4-206ENST00000478938 ORC2Q13416 577 aaPredicted RBP22.22■■□□□ 1.15
SDF4-206ENST00000478938 PDAP1Q13442 181 aaKnown RBP22.22■■□□□ 1.15
SDF4-206ENST00000478938 DCAF6Q58WW2 860 aa22.22■■□□□ 1.15
SDF4-206ENST00000478938 OGFRL1Q5TC84 451 aaPredicted RBP22.22■■□□□ 1.15
SDF4-206ENST00000478938 ANKMY2Q8IV38 441 aa22.22■■□□□ 1.15
SDF4-206ENST00000478938 GLIS1Q8NBF1 620 aa22.22■■□□□ 1.15
SDF4-206ENST00000478938 BBOF1Q8ND07 529 aa22.22■■□□□ 1.15
SDF4-206ENST00000478938 DDI1Q8WTU0 396 aa22.22■■□□□ 1.15
SDF4-206ENST00000478938 HAS1Q92839 578 aa22.22■■□□□ 1.15
SDF4-206ENST00000478938 FAM111AQ96PZ2 611 aa22.22■■□□□ 1.15
SDF4-206ENST00000478938 APEX2Q9UBZ4 518 aa22.22■■□□□ 1.15
SDF4-206ENST00000478938 MARCOQ9UEW3 520 aaPredicted RBP22.22■■□□□ 1.15
SDF4-206ENST00000478938 SPO11Q9Y5K1 396 aa22.22■■□□□ 1.15
SDF4-206ENST00000478938 MYO3BQ8WXR4 1341 aa22.21■■□□□ 1.15
SDF4-206ENST00000478938 CASQ2O14958 399 aaPredicted RBP22.21■■□□□ 1.15
SDF4-206ENST00000478938 SLC16A3O15427 465 aaKnown RBP22.21■■□□□ 1.15
SDF4-206ENST00000478938 PEX1O43933 1283 aa22.21■■□□□ 1.15
SDF4-206ENST00000478938 MARCH6O60337 910 aa22.21■■□□□ 1.15
SDF4-206ENST00000478938 KITP10721 976 aa22.21■■□□□ 1.15
SDF4-206ENST00000478938 PDK1Q15118 436 aa22.21■■□□□ 1.15
SDF4-206ENST00000478938 TCEAL1Q15170 157 aa22.21■■□□□ 1.15
SDF4-206ENST00000478938 DCDC5Q6ZRR9 648 aa22.21■■□□□ 1.15
SDF4-206ENST00000478938 GSTA5Q7RTV2 222 aa22.21■■□□□ 1.15
SDF4-206ENST00000478938 CCDC106Q9BWC9 280 aa22.21■■□□□ 1.15
SDF4-206ENST00000478938 TPK1Q9H3S4 243 aa22.21■■□□□ 1.15
SDF4-206ENST00000478938 PSTPIP2Q9H939 334 aa22.21■■□□□ 1.15
SDF4-206ENST00000478938 TCHHL1Q5QJ38 904 aaPredicted RBP22.21■■□□□ 1.15
SDF4-206ENST00000478938 ITPRIPL1Q6GPH6 555 aa22.21■■□□□ 1.15
SDF4-206ENST00000478938 FASTKD5Q7L8L6 764 aaKnown RBP22.21■■□□□ 1.15
SDF4-206ENST00000478938 BIRC8Q96P09 236 aa22.21■■□□□ 1.15
SDF4-206ENST00000478938 Q9H521 79 aa22.21■■□□□ 1.15
SDF4-206ENST00000478938 SLC24A2Q9UI40 661 aa22.21■■□□□ 1.15
SDF4-206ENST00000478938 K7EPI3 171 aa22.2■■□□□ 1.14
SDF4-206ENST00000478938 KRT38O76015 456 aa22.2■■□□□ 1.14
SDF4-206ENST00000478938 ZSCAN5DPP0CG00 497 aa22.2■■□□□ 1.14
SDF4-206ENST00000478938 CDK9P50750 372 aaKnown RBP22.2■■□□□ 1.14
SDF4-206ENST00000478938 SLC5A3P53794 718 aa22.2■■□□□ 1.14
SDF4-206ENST00000478938 PSMD6Q15008 389 aa22.2■■□□□ 1.14
SDF4-206ENST00000478938 C6orf52Q5T4I8 152 aa22.2■■□□□ 1.14
SDF4-206ENST00000478938 C14orf80Q86SX3 495 aa22.2■■□□□ 1.14
SDF4-206ENST00000478938 RAB3IL1Q8TBN0 382 aa22.2■■□□□ 1.14
SDF4-206ENST00000478938 RUSC1Q9BVN2 902 aa22.2■■□□□ 1.14
SDF4-206ENST00000478938 DRC3Q9H069 523 aa22.2■■□□□ 1.14
SDF4-206ENST00000478938 ZNF395Q9H8N7 513 aaPredicted RBP22.2■■□□□ 1.14
SDF4-206ENST00000478938 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.2■■□□□ 1.14
SDF4-206ENST00000478938 MTA2O94776 668 aa22.2■■□□□ 1.14
SDF4-206ENST00000478938 ADSSP30520 456 aa22.2■■□□□ 1.14
SDF4-206ENST00000478938 TNNI2P48788 182 aa22.2■■□□□ 1.14
SDF4-206ENST00000478938 METTL21CQ5VZV1 264 aa22.2■■□□□ 1.14
SDF4-206ENST00000478938 ARID3BQ8IVW6 561 aaPredicted RBP22.2■■□□□ 1.14
SDF4-206ENST00000478938 GPATCH1Q9BRR8 931 aaKnown RBP22.2■■□□□ 1.14
SDF4-206ENST00000478938 TBC1D23Q9NUY8 699 aa22.2■■□□□ 1.14
SDF4-206ENST00000478938 RBMX2Q9Y388 322 aaKnown RBP22.2■■□□□ 1.14
SDF4-206ENST00000478938 ROBO3Q96MS0 1386 aa22.19■■□□□ 1.14
SDF4-206ENST00000478938 FAM58BPP0C7Q3 252 aa22.19■■□□□ 1.14
SDF4-206ENST00000478938 KPNA1P52294 538 aaPredicted RBP22.19■■□□□ 1.14
SDF4-206ENST00000478938 ATP1A4Q13733 1029 aa22.19■■□□□ 1.14
SDF4-206ENST00000478938 OASLQ15646 514 aaKnown RBP22.19■■□□□ 1.14
SDF4-206ENST00000478938 NEPROQ6NW34 567 aa22.19■■□□□ 1.14
SDF4-206ENST00000478938 DYNLL2Q96FJ2 89 aa22.19■■□□□ 1.14
SDF4-206ENST00000478938 PIGSQ96S52 555 aa22.19■■□□□ 1.14
SDF4-206ENST00000478938 PLVAPQ9BX97 442 aa22.19■■□□□ 1.14
SDF4-206ENST00000478938 CYP4F11Q9HBI6 524 aa22.19■■□□□ 1.14
SDF4-206ENST00000478938 KCNK4Q9NYG8 393 aa22.19■■□□□ 1.14
SDF4-206ENST00000478938 MYH14Q7Z406 1995 aaKnown RBP22.19■■□□□ 1.14
SDF4-206ENST00000478938 SF3B1O75533 1304 aaKnown RBP eCLIP22.19■■□□□ 1.142e-7■■■■■ 85.3
SDF4-206ENST00000478938 CCNT2O60583 730 aaKnown RBP22.19■■□□□ 1.14
SDF4-206ENST00000478938 LPXNO60711 386 aa22.19■■□□□ 1.14
SDF4-206ENST00000478938 POTEGQ6S5H5 508 aa22.19■■□□□ 1.14
SDF4-206ENST00000478938 CPNE9Q8IYJ1 553 aa22.19■■□□□ 1.14
SDF4-206ENST00000478938 CACNA1SQ13698 1873 aa22.19■■□□□ 1.14
SDF4-206ENST00000478938 F5H6K3 240 aa22.18■■□□□ 1.14
SDF4-206ENST00000478938 PDE8AO60658 829 aa22.18■■□□□ 1.14
SDF4-206ENST00000478938 KLRC2P26717 231 aa22.18■■□□□ 1.14
SDF4-206ENST00000478938 SF3B3Q15393 1217 aaKnown RBP22.18■■□□□ 1.14
SDF4-206ENST00000478938 EFHC2Q5JST6 749 aa22.18■■□□□ 1.14
SDF4-206ENST00000478938 OGFOD2Q6N063 350 aa22.18■■□□□ 1.14
SDF4-206ENST00000478938 ZNF804AQ7Z570 1209 aa22.18■■□□□ 1.14
SDF4-206ENST00000478938 CENPSQ8N2Z9 138 aa22.18■■□□□ 1.14
SDF4-206ENST00000478938 C1orf21Q9H246 121 aa22.18■■□□□ 1.14
SDF4-206ENST00000478938 GIT1Q9Y2X7 761 aa22.18■■□□□ 1.14
SDF4-206ENST00000478938 NR2E3Q9Y5X4 410 aa22.18■■□□□ 1.14
SDF4-206ENST00000478938 XPO1O14980 1071 aaKnown RBP22.18■■□□□ 1.14
SDF4-206ENST00000478938 GPX6P59796 221 aa22.18■■□□□ 1.14
SDF4-206ENST00000478938 CYTH1Q15438 398 aa22.18■■□□□ 1.14
SDF4-206ENST00000478938 TTC13Q8NBP0 860 aa22.18■■□□□ 1.14
SDF4-206ENST00000478938 MZB1Q8WU39 189 aa22.18■■□□□ 1.14
SDF4-206ENST00000478938 ZNF512Q96ME7 567 aaPredicted RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms