RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 PNMA5Q96PV4 448 aa18.52■□□□□ 0.56
VIM-204ENST00000478746 CYP2S1Q96SQ9 504 aa18.52■□□□□ 0.56
VIM-204ENST00000478746 LLPHQ9BRT6 129 aaKnown RBP18.52■□□□□ 0.56
VIM-204ENST00000478746 PI4K2AQ9BTU6 479 aa18.52■□□□□ 0.56
VIM-204ENST00000478746 SLC32A1Q9H598 525 aa18.52■□□□□ 0.56
VIM-204ENST00000478746 TRPC7Q9HCX4 862 aa18.52■□□□□ 0.56
VIM-204ENST00000478746 DPP3Q9NY33 737 aa18.52■□□□□ 0.56
VIM-204ENST00000478746 UXTQ9UBK9 157 aaPredicted RBP18.52■□□□□ 0.56
VIM-204ENST00000478746 NEUROG3Q9Y4Z2 214 aa18.52■□□□□ 0.56
VIM-204ENST00000478746 WNT6Q9Y6F9 365 aa18.52■□□□□ 0.56
VIM-204ENST00000478746 USP17L7P0C7H9 530 aa18.51■□□□□ 0.55
VIM-204ENST00000478746 TSPY1Q01534 308 aa18.51■□□□□ 0.55
VIM-204ENST00000478746 LMAN2Q12907 356 aa18.51■□□□□ 0.55
VIM-204ENST00000478746 ZNF77Q15935 545 aa18.51■□□□□ 0.55
VIM-204ENST00000478746 EML3Q32P44 896 aa18.51■□□□□ 0.55
VIM-204ENST00000478746 C2orf27AQ580R0 203 aa18.51■□□□□ 0.55
VIM-204ENST00000478746 ARSHQ5FYA8 562 aa18.51■□□□□ 0.55
VIM-204ENST00000478746 SDHAF4Q5VUM1 108 aa18.51■□□□□ 0.55
VIM-204ENST00000478746 ANO7Q6IWH7 933 aa18.51■□□□□ 0.55
VIM-204ENST00000478746 RASSF3Q86WH2 238 aa18.51■□□□□ 0.55
VIM-204ENST00000478746 FAM184AQ8NB25 1140 aa18.51■□□□□ 0.55
VIM-204ENST00000478746 USP33Q8TEY7 942 aa18.51■□□□□ 0.55
VIM-204ENST00000478746 CNOT6LQ96LI5 555 aaKnown RBP18.51■□□□□ 0.55
VIM-204ENST00000478746 NUSAP1Q9BXS6 441 aaKnown RBP18.51■□□□□ 0.55
VIM-204ENST00000478746 ASB7Q9H672 318 aa18.51■□□□□ 0.55
VIM-204ENST00000478746 TMEM206Q9H813 350 aa18.51■□□□□ 0.55
VIM-204ENST00000478746 TMLHEQ9NVH6 421 aa18.51■□□□□ 0.55
VIM-204ENST00000478746 TSC2P49815 1807 aa18.51■□□□□ 0.55
VIM-204ENST00000478746 TRAV19A0A0A6YYK7 116 aa18.5■□□□□ 0.55
VIM-204ENST00000478746 KPNA7A9QM74 516 aa18.5■□□□□ 0.55
VIM-204ENST00000478746 HYAL3O43820 417 aaPredicted RBP18.5■□□□□ 0.55
VIM-204ENST00000478746 CKMP06732 381 aa18.5■□□□□ 0.55
VIM-204ENST00000478746 SCP2P22307 547 aa18.5■□□□□ 0.55
VIM-204ENST00000478746 ACOT2P49753 483 aa18.5■□□□□ 0.55
VIM-204ENST00000478746 SEC13P55735 322 aa18.5■□□□□ 0.55
VIM-204ENST00000478746 RPL10AP62906 217 aaKnown RBP18.5■□□□□ 0.55
VIM-204ENST00000478746 NFE2Q16621 373 aaPredicted RBP18.5■□□□□ 0.55
VIM-204ENST00000478746 DDR2Q16832 855 aa18.5■□□□□ 0.55
VIM-204ENST00000478746 TRIM61Q5EBN2 209 aa18.5■□□□□ 0.55
VIM-204ENST00000478746 TTC30AQ86WT1 665 aa18.5■□□□□ 0.55
VIM-204ENST00000478746 CDK5RAP3Q96JB5 506 aa18.5■□□□□ 0.55
VIM-204ENST00000478746 SLC22A12Q96S37 553 aa18.5■□□□□ 0.55
VIM-204ENST00000478746 CCSER1Q9C0I3 900 aa18.5■□□□□ 0.55
VIM-204ENST00000478746 LINC00597Q9H2U6 94 aa18.5■□□□□ 0.55
VIM-204ENST00000478746 EVLQ9UI08 416 aaPredicted RBP18.5■□□□□ 0.55
VIM-204ENST00000478746 MSRB2Q9Y3D2 182 aa18.5■□□□□ 0.55
VIM-204ENST00000478746 C2CD2Q9Y426 696 aa18.5■□□□□ 0.55
VIM-204ENST00000478746 TCHHQ07283 1943 aa18.5■□□□□ 0.55
VIM-204ENST00000478746 OBSL1O75147 1896 aa18.5■□□□□ 0.55
VIM-204ENST00000478746 MYO16Q9Y6X6 1858 aa18.5■□□□□ 0.55
VIM-204ENST00000478746 GON4LQ3T8J9 2241 aa18.49■□□□□ 0.55
VIM-204ENST00000478746 NBEAQ8NFP9 2946 aa18.49■□□□□ 0.55
VIM-204ENST00000478746 K7EQS6 105 aa18.49■□□□□ 0.55
VIM-204ENST00000478746 MAP3K13O43283 966 aa18.49■□□□□ 0.55
VIM-204ENST00000478746 SV2CQ496J9 727 aa18.49■□□□□ 0.55
VIM-204ENST00000478746 LPCAT2Q7L5N7 544 aa18.49■□□□□ 0.55
VIM-204ENST00000478746 EFCAB13Q8IY85 973 aa18.49■□□□□ 0.55
VIM-204ENST00000478746 CCDC33Q8N5R6 958 aa18.49■□□□□ 0.55
VIM-204ENST00000478746 MYCT1Q8N699 235 aa18.49■□□□□ 0.55
VIM-204ENST00000478746 ODF2LQ9ULJ1 636 aa18.49■□□□□ 0.55
VIM-204ENST00000478746 MMP17Q9ULZ9 603 aa18.49■□□□□ 0.55
VIM-204ENST00000478746 LIMCH1Q9UPQ0 1083 aa18.49■□□□□ 0.55
VIM-204ENST00000478746 K7ENM7 598 aa18.48■□□□□ 0.55
VIM-204ENST00000478746 TADA3O75528 432 aa18.48■□□□□ 0.55
VIM-204ENST00000478746 ALDH1A2O94788 518 aa18.48■□□□□ 0.55
VIM-204ENST00000478746 NOL4O94818 638 aa18.48■□□□□ 0.55
VIM-204ENST00000478746 CYP2F1P24903 491 aa18.48■□□□□ 0.55
VIM-204ENST00000478746 MAPK8P45983 427 aa18.48■□□□□ 0.55
VIM-204ENST00000478746 HMGN5P82970 282 aaKnown RBP18.48■□□□□ 0.55
VIM-204ENST00000478746 USP4Q13107 963 aa18.48■□□□□ 0.55
VIM-204ENST00000478746 CRY1Q16526 586 aa18.48■□□□□ 0.55
VIM-204ENST00000478746 SLC39A4Q6P5W5 647 aa18.48■□□□□ 0.55
VIM-204ENST00000478746 ARL14EPQ8N8R7 260 aaPredicted RBP18.48■□□□□ 0.55
VIM-204ENST00000478746 MDGA1Q8NFP4 955 aa18.48■□□□□ 0.55
VIM-204ENST00000478746 SH3RF2Q8TEC5 729 aa18.48■□□□□ 0.55
VIM-204ENST00000478746 TRMT2BQ96GJ1 504 aaKnown RBP18.48■□□□□ 0.55
VIM-204ENST00000478746 MYRFLQ96LU7 910 aa18.48■□□□□ 0.55
VIM-204ENST00000478746 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.48■□□□□ 0.55
VIM-204ENST00000478746 CIZ1Q9ULV3 898 aaPredicted RBP18.48■□□□□ 0.55
VIM-204ENST00000478746 KIAA1549LQ6ZVL6 1849 aa18.48■□□□□ 0.55
VIM-204ENST00000478746 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.47■□□□□ 0.55
VIM-204ENST00000478746 ANKRD63C9JTQ0 380 aa18.47■□□□□ 0.55
VIM-204ENST00000478746 TNFRSF10BO14763 440 aa18.47■□□□□ 0.55
VIM-204ENST00000478746 FAM13AO94988 1023 aa18.47■□□□□ 0.55
VIM-204ENST00000478746 NFATC1O95644 943 aa18.47■□□□□ 0.55
VIM-204ENST00000478746 RDXP35241 583 aaKnown RBP18.47■□□□□ 0.55
VIM-204ENST00000478746 SIM1P81133 766 aaPredicted RBP18.47■□□□□ 0.55
VIM-204ENST00000478746 ADALQ6DHV7 355 aa18.47■□□□□ 0.55
VIM-204ENST00000478746 SYT12Q8IV01 421 aa18.47■□□□□ 0.55
VIM-204ENST00000478746 TMEFF1Q8IYR6 380 aa18.47■□□□□ 0.55
VIM-204ENST00000478746 FSIP1Q8NA03 581 aa18.47■□□□□ 0.55
VIM-204ENST00000478746 OLIG1Q8TAK6 271 aa18.47■□□□□ 0.55
VIM-204ENST00000478746 LRRC15Q8TF66 581 aa18.47■□□□□ 0.55
VIM-204ENST00000478746 RLN3Q8WXF3 142 aa18.47■□□□□ 0.55
VIM-204ENST00000478746 REEP2Q9BRK0 252 aa18.47■□□□□ 0.55
VIM-204ENST00000478746 ABCB6Q9NP58 842 aa18.47■□□□□ 0.55
VIM-204ENST00000478746 KLK13Q9UKR3 277 aa18.47■□□□□ 0.55
VIM-204ENST00000478746 WDFY3Q8IZQ1 3526 aa18.47■□□□□ 0.55
VIM-204ENST00000478746 PI4KAP42356 2102 aa18.47■□□□□ 0.55
VIM-204ENST00000478746 SPAARA0A1B0GVQ0 90 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms