RNA–Protein interactions for RNA: ENST00000478541.1

CYTH3-206, Transcript of cytohesin 3, humanhuman

TSL 2

Gene CYTH3, Length 505 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-206ENST00000478541 TRMT61BQ9BVS5 477 aaKnown RBP17.11■□□□□ 0.33
CYTH3-206ENST00000478541 GTPBP4Q9BZE4 634 aaKnown RBP17.11■□□□□ 0.33
CYTH3-206ENST00000478541 SNX25Q9H3E2 840 aa17.11■□□□□ 0.33
CYTH3-206ENST00000478541 OBP2AQ9NY56 170 aa17.11■□□□□ 0.33
CYTH3-206ENST00000478541 MAGEC2Q9UBF1 373 aaPredicted RBP17.11■□□□□ 0.33
CYTH3-206ENST00000478541 HOOK1Q9UJC3 728 aaKnown RBP17.11■□□□□ 0.33
CYTH3-206ENST00000478541 NME7Q9Y5B8 376 aa17.11■□□□□ 0.33
CYTH3-206ENST00000478541 TICRRQ7Z2Z1 1910 aa17.11■□□□□ 0.33
CYTH3-206ENST00000478541 KIF26AQ9ULI4 1882 aaPredicted RBP17.1■□□□□ 0.33
CYTH3-206ENST00000478541 STK25O00506 426 aa17.1■□□□□ 0.33
CYTH3-206ENST00000478541 NOL4O94818 638 aa17.1■□□□□ 0.33
CYTH3-206ENST00000478541 SMC2O95347 1197 aa17.1■□□□□ 0.33
CYTH3-206ENST00000478541 F11P03951 625 aa17.1■□□□□ 0.33
CYTH3-206ENST00000478541 PDGFRBP09619 1106 aa17.1■□□□□ 0.33
CYTH3-206ENST00000478541 RFX1P22670 979 aa17.1■□□□□ 0.33
CYTH3-206ENST00000478541 PSMC2P35998 433 aaKnown RBP17.1■□□□□ 0.33
CYTH3-206ENST00000478541 VIPR2P41587 438 aa17.1■□□□□ 0.33
CYTH3-206ENST00000478541 GPR15P49685 360 aa17.1■□□□□ 0.33
CYTH3-206ENST00000478541 VAMP7P51809 220 aa17.1■□□□□ 0.33
CYTH3-206ENST00000478541 NLRP12P59046 1061 aa17.1■□□□□ 0.33
CYTH3-206ENST00000478541 PSMC1P62191 440 aaKnown RBP17.1■□□□□ 0.33
CYTH3-206ENST00000478541 FCHO2Q0JRZ9 810 aa17.1■□□□□ 0.33
CYTH3-206ENST00000478541 ADAM9Q13443 819 aa17.1■□□□□ 0.33
CYTH3-206ENST00000478541 DDR2Q16832 855 aa17.1■□□□□ 0.33
CYTH3-206ENST00000478541 SGSM1Q2NKQ1 1148 aa17.1■□□□□ 0.33
CYTH3-206ENST00000478541 ZNF699Q32M78 642 aa17.1■□□□□ 0.33
CYTH3-206ENST00000478541 ZNF667Q5HYK9 610 aa17.1■□□□□ 0.33
CYTH3-206ENST00000478541 GPR158Q5T848 1215 aa17.1■□□□□ 0.33
CYTH3-206ENST00000478541 SV2AQ7L0J3 742 aa17.1■□□□□ 0.33
CYTH3-206ENST00000478541 TMEM150AQ86TG1 271 aa17.1■□□□□ 0.33
CYTH3-206ENST00000478541 CCDC105Q8IYK2 499 aa17.1■□□□□ 0.33
CYTH3-206ENST00000478541 SMYD4Q8IYR2 804 aaPredicted RBP17.1■□□□□ 0.33
CYTH3-206ENST00000478541 OR6B3Q8NGW1 331 aa17.1■□□□□ 0.33
CYTH3-206ENST00000478541 IRF7Q92985 503 aa17.1■□□□□ 0.33
CYTH3-206ENST00000478541 MYLPFQ96A32 169 aa17.1■□□□□ 0.33
CYTH3-206ENST00000478541 MYRFLQ96LU7 910 aa17.1■□□□□ 0.33
CYTH3-206ENST00000478541 TASP1Q9H6P5 420 aa17.1■□□□□ 0.33
CYTH3-206ENST00000478541 BRD9Q9H8M2 597 aa17.1■□□□□ 0.33
CYTH3-206ENST00000478541 UXTQ9UBK9 157 aaPredicted RBP17.1■□□□□ 0.33
CYTH3-206ENST00000478541 NXF1Q9UBU9 619 aaKnown RBP17.1■□□□□ 0.33
CYTH3-206ENST00000478541 PCDHA5Q9Y5H7 936 aa17.1■□□□□ 0.33
CYTH3-206ENST00000478541 COL4A3Q01955 1670 aa17.1■□□□□ 0.33
CYTH3-206ENST00000478541 KANSL1LA0AUZ9 987 aa17.09■□□□□ 0.33
CYTH3-206ENST00000478541 HEPACAM2A8MVW5 462 aa17.09■□□□□ 0.33
CYTH3-206ENST00000478541 DDX6P26196 483 aaKnown RBP eCLIP17.09■□□□□ 0.33
CYTH3-206ENST00000478541 PRCPP42785 496 aa17.09■□□□□ 0.33
CYTH3-206ENST00000478541 CYP4F8P98187 520 aa17.09■□□□□ 0.33
CYTH3-206ENST00000478541 GRM2Q14416 872 aa17.09■□□□□ 0.33
CYTH3-206ENST00000478541 ARID3BQ8IVW6 561 aaPredicted RBP17.09■□□□□ 0.33
CYTH3-206ENST00000478541 FAM186BQ8IYM0 893 aa17.09■□□□□ 0.33
CYTH3-206ENST00000478541 PJA1Q8NG27 643 aa17.09■□□□□ 0.33
CYTH3-206ENST00000478541 SMARCE1Q969G3 411 aa17.09■□□□□ 0.33
CYTH3-206ENST00000478541 RSPRY1Q96DX4 576 aa17.09■□□□□ 0.33
CYTH3-206ENST00000478541 PCED1BQ96HM7 432 aa17.09■□□□□ 0.33
CYTH3-206ENST00000478541 SPATA17Q96L03 361 aa17.09■□□□□ 0.33
CYTH3-206ENST00000478541 OSBPL6Q9BZF3 934 aa17.09■□□□□ 0.33
CYTH3-206ENST00000478541 SIT1Q9Y3P8 196 aa17.09■□□□□ 0.33
CYTH3-206ENST00000478541 NCANO14594 1321 aa17.09■□□□□ 0.33
CYTH3-206ENST00000478541 ANAPC1Q9H1A4 1944 aa17.09■□□□□ 0.33
CYTH3-206ENST00000478541 ZNF638Q14966 1978 aaKnown RBP17.08■□□□□ 0.33
CYTH3-206ENST00000478541 SLC38A8A6NNN8 435 aa17.08■□□□□ 0.32
CYTH3-206ENST00000478541 A8MXQ7 604 aa17.08■□□□□ 0.32
CYTH3-206ENST00000478541 ASS1P00966 412 aaKnown RBP17.08■□□□□ 0.32
CYTH3-206ENST00000478541 KRT13P13646 458 aa17.08■□□□□ 0.32
CYTH3-206ENST00000478541 P4HA1P13674 534 aa17.08■□□□□ 0.32
CYTH3-206ENST00000478541 PTPN1P18031 435 aaKnown RBP17.08■□□□□ 0.32
CYTH3-206ENST00000478541 GDI1P31150 447 aa17.08■□□□□ 0.32
CYTH3-206ENST00000478541 SDHAF4Q5VUM1 108 aa17.08■□□□□ 0.32
CYTH3-206ENST00000478541 DTWD2Q8NBA8 298 aa17.08■□□□□ 0.32
CYTH3-206ENST00000478541 SLC46A2Q9BY10 475 aa17.08■□□□□ 0.32
CYTH3-206ENST00000478541 DLGAP2Q9P1A6 1054 aa17.08■□□□□ 0.32
CYTH3-206ENST00000478541 MAGED2Q9UNF1 606 aaPredicted RBP17.08■□□□□ 0.32
CYTH3-206ENST00000478541 ARNTLO00327 626 aa17.07■□□□□ 0.32
CYTH3-206ENST00000478541 ZNF263O14978 683 aa17.07■□□□□ 0.32
CYTH3-206ENST00000478541 TRIM66O15016 1216 aa17.07■□□□□ 0.32
CYTH3-206ENST00000478541 CHADO15335 359 aa17.07■□□□□ 0.32
CYTH3-206ENST00000478541 KINO60870 393 aaKnown RBP17.07■□□□□ 0.32
CYTH3-206ENST00000478541 BDNFP23560 247 aa17.07■□□□□ 0.32
CYTH3-206ENST00000478541 HOXD11P31277 338 aaPredicted RBP17.07■□□□□ 0.32
CYTH3-206ENST00000478541 MLLT6P55198 1093 aaPredicted RBP17.07■□□□□ 0.32
CYTH3-206ENST00000478541 CYP27A1Q02318 531 aa17.07■□□□□ 0.32
CYTH3-206ENST00000478541 MDH1BQ5I0G3 518 aa17.07■□□□□ 0.32
CYTH3-206ENST00000478541 SCN4BQ8IWT1 228 aa17.07■□□□□ 0.32
CYTH3-206ENST00000478541 ZC3H3Q8IXZ2 948 aaKnown RBP17.07■□□□□ 0.32
CYTH3-206ENST00000478541 CMTM8Q8IZV2 173 aa17.07■□□□□ 0.32
CYTH3-206ENST00000478541 B3GALNT2Q8NCR0 500 aa17.07■□□□□ 0.32
CYTH3-206ENST00000478541 NELL2Q99435 816 aa17.07■□□□□ 0.32
CYTH3-206ENST00000478541 FOXQ1Q9C009 403 aa17.07■□□□□ 0.32
CYTH3-206ENST00000478541 DPEP3Q9H4B8 488 aa17.07■□□□□ 0.32
CYTH3-206ENST00000478541 SMYD3Q9H7B4 428 aa17.07■□□□□ 0.32
CYTH3-206ENST00000478541 HEBP1Q9NRV9 189 aa17.07■□□□□ 0.32
CYTH3-206ENST00000478541 DMDP11532 3685 aa17.07■□□□□ 0.32
CYTH3-206ENST00000478541 MYO15AQ9UKN7 3530 aa17.06■□□□□ 0.32
CYTH3-206ENST00000478541 PATJQ8NI35 1801 aa17.06■□□□□ 0.32
CYTH3-206ENST00000478541 DPYSL4O14531 572 aa17.06■□□□□ 0.32
CYTH3-206ENST00000478541 CETN3O15182 167 aa17.06■□□□□ 0.32
CYTH3-206ENST00000478541 GADD45BO75293 160 aaPredicted RBP17.06■□□□□ 0.32
CYTH3-206ENST00000478541 TADA3O75528 432 aa17.06■□□□□ 0.32
CYTH3-206ENST00000478541 PRAMEF12O95522 483 aa17.06■□□□□ 0.32
CYTH3-206ENST00000478541 HLA-DRAP01903 254 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms