RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 DUSP15Q9H1R2 295 aaPredicted RBP13.76□□□□□ -0.21
TDP2-204ENST00000478507 ZHX3Q9H4I2 956 aa13.76□□□□□ -0.21
TDP2-204ENST00000478507 ECT2Q9H8V3 914 aa13.76□□□□□ -0.21
TDP2-204ENST00000478507 EBF1Q9UH73 591 aa13.76□□□□□ -0.21
TDP2-204ENST00000478507 L1RE1Q9UN81 338 aa13.76□□□□□ -0.21
TDP2-204ENST00000478507 PRPF40AO75400 957 aaKnown RBP13.75□□□□□ -0.21
TDP2-204ENST00000478507 IL18RAPO95256 599 aa13.75□□□□□ -0.21
TDP2-204ENST00000478507 CD2BP2O95400 341 aaKnown RBP13.75□□□□□ -0.21
TDP2-204ENST00000478507 KRT18P05783 430 aaKnown RBP13.75□□□□□ -0.21
TDP2-204ENST00000478507 CYP2F1P24903 491 aa13.75□□□□□ -0.21
TDP2-204ENST00000478507 DDIT3P35638 169 aa13.75□□□□□ -0.21
TDP2-204ENST00000478507 PNPLA4P41247 253 aa13.75□□□□□ -0.21
TDP2-204ENST00000478507 AMPD2Q01433 879 aa13.75□□□□□ -0.21
TDP2-204ENST00000478507 KCNA1Q09470 495 aa13.75□□□□□ -0.21
TDP2-204ENST00000478507 MTF1Q14872 753 aa13.75□□□□□ -0.21
TDP2-204ENST00000478507 DDR2Q16832 855 aa13.75□□□□□ -0.21
TDP2-204ENST00000478507 CCDC142Q17RM4 750 aa13.75□□□□□ -0.21
TDP2-204ENST00000478507 C8orf34Q49A92 452 aa13.75□□□□□ -0.21
TDP2-204ENST00000478507 INTS6LQ5JSJ4 861 aaKnown RBP13.75□□□□□ -0.21
TDP2-204ENST00000478507 ERICH6BQ5W0A0 696 aa13.75□□□□□ -0.21
TDP2-204ENST00000478507 TCEAL6Q6IPX3 200 aa13.75□□□□□ -0.21
TDP2-204ENST00000478507 SFR1Q86XK3 245 aa13.75□□□□□ -0.21
TDP2-204ENST00000478507 ZSWIM2Q8NEG5 633 aa13.75□□□□□ -0.21
TDP2-204ENST00000478507 RPLP0P6Q8NHW5 317 aa13.75□□□□□ -0.21
TDP2-204ENST00000478507 OSCP1Q8WVF1 389 aa13.75□□□□□ -0.21
TDP2-204ENST00000478507 MRPS31Q92665 395 aaKnown RBP13.75□□□□□ -0.21
TDP2-204ENST00000478507 TCEAL3Q969E4 200 aa13.75□□□□□ -0.21
TDP2-204ENST00000478507 ZNF560Q96MR9 790 aa13.75□□□□□ -0.21
TDP2-204ENST00000478507 TMEM206Q9H813 350 aa13.75□□□□□ -0.21
TDP2-204ENST00000478507 VPS45Q9NRW7 570 aa13.75□□□□□ -0.21
TDP2-204ENST00000478507 GCNT4Q9P109 453 aa13.75□□□□□ -0.21
TDP2-204ENST00000478507 FAM208BQ5VWN6 2430 aa13.74□□□□□ -0.21
TDP2-204ENST00000478507 GABRDO14764 452 aa13.74□□□□□ -0.21
TDP2-204ENST00000478507 KCNK5O95279 499 aa13.74□□□□□ -0.21
TDP2-204ENST00000478507 TCF3P15923 654 aa13.74□□□□□ -0.21
TDP2-204ENST00000478507 POLR2BP30876 1174 aaKnown RBP13.74□□□□□ -0.21
TDP2-204ENST00000478507 TSPY1Q01534 308 aa13.74□□□□□ -0.21
TDP2-204ENST00000478507 POSTNQ15063 836 aa13.74□□□□□ -0.21
TDP2-204ENST00000478507 RABEP1Q15276 862 aa13.74□□□□□ -0.21
TDP2-204ENST00000478507 EML3Q32P44 896 aa13.74□□□□□ -0.21
TDP2-204ENST00000478507 CFAP221Q4G0U5 840 aa13.74□□□□□ -0.21
TDP2-204ENST00000478507 CC2D1AQ6P1N0 951 aaPredicted RBP13.74□□□□□ -0.21
TDP2-204ENST00000478507 USP49Q70CQ1 688 aa13.74□□□□□ -0.21
TDP2-204ENST00000478507 LIMS2Q7Z4I7 341 aa13.74□□□□□ -0.21
TDP2-204ENST00000478507 BRSK2Q8IWQ3 736 aa13.74□□□□□ -0.21
TDP2-204ENST00000478507 CPA6Q8N4T0 437 aa13.74□□□□□ -0.21
TDP2-204ENST00000478507 LRRC52Q8N7C0 313 aa13.74□□□□□ -0.21
TDP2-204ENST00000478507 POMGNT1Q8WZA1 660 aa13.74□□□□□ -0.21
TDP2-204ENST00000478507 CHAMP1Q96JM3 812 aa13.74□□□□□ -0.21
TDP2-204ENST00000478507 FAM84AQ96KN4 292 aa13.74□□□□□ -0.21
TDP2-204ENST00000478507 CYP2S1Q96SQ9 504 aa13.74□□□□□ -0.21
TDP2-204ENST00000478507 GDAP2Q9NXN4 497 aa13.74□□□□□ -0.21
TDP2-204ENST00000478507 UXTQ9UBK9 157 aaPredicted RBP13.74□□□□□ -0.21
TDP2-204ENST00000478507 SIX4Q9UIU6 781 aa13.74□□□□□ -0.21
TDP2-204ENST00000478507 MAGED2Q9UNF1 606 aaPredicted RBP13.74□□□□□ -0.21
TDP2-204ENST00000478507 IGF2RP11717 2491 aa13.73□□□□□ -0.21
TDP2-204ENST00000478507 BCLAF3A2AJT9 711 aaKnown RBP13.73□□□□□ -0.21
TDP2-204ENST00000478507 H3BQV1 296 aa13.73□□□□□ -0.21
TDP2-204ENST00000478507 DCLK1O15075 740 aa13.73□□□□□ -0.21
TDP2-204ENST00000478507 HCRTO43612 131 aa13.73□□□□□ -0.21
TDP2-204ENST00000478507 APBB3O95704 486 aa13.73□□□□□ -0.21
TDP2-204ENST00000478507 BMP15O95972 392 aa13.73□□□□□ -0.21
TDP2-204ENST00000478507 ITGB3P05106 788 aa13.73□□□□□ -0.21
TDP2-204ENST00000478507 CHRM1P11229 460 aaPredicted RBP13.73□□□□□ -0.21
TDP2-204ENST00000478507 ACAT1P24752 427 aaKnown RBP13.73□□□□□ -0.21
TDP2-204ENST00000478507 RPL10AP62906 217 aaKnown RBP13.73□□□□□ -0.21
TDP2-204ENST00000478507 ZXDBP98169 803 aa13.73□□□□□ -0.21
TDP2-204ENST00000478507 DMC1Q14565 340 aa13.73□□□□□ -0.21
TDP2-204ENST00000478507 GAB4Q2WGN9 574 aa13.73□□□□□ -0.21
TDP2-204ENST00000478507 OSTM1Q86WC4 334 aa13.73□□□□□ -0.21
TDP2-204ENST00000478507 TMEM86AQ8N2M4 240 aa13.73□□□□□ -0.21
TDP2-204ENST00000478507 KRI1Q8N9T8 703 aaKnown RBP13.73□□□□□ -0.21
TDP2-204ENST00000478507 SPATA18Q8TC71 538 aa13.73□□□□□ -0.21
TDP2-204ENST00000478507 CD101Q93033 1021 aa13.73□□□□□ -0.21
TDP2-204ENST00000478507 ATP2A3Q93084 1043 aa13.73□□□□□ -0.21
TDP2-204ENST00000478507 DNAJC19Q96DA6 116 aa13.73□□□□□ -0.21
TDP2-204ENST00000478507 EPSTI1Q96J88 318 aa13.73□□□□□ -0.21
TDP2-204ENST00000478507 FAM213AQ9BRX8 229 aa13.73□□□□□ -0.21
TDP2-204ENST00000478507 DUS2Q9NX74 493 aaKnown RBP13.73□□□□□ -0.21
TDP2-204ENST00000478507 DDX43Q9NXZ2 648 aaKnown RBP13.73□□□□□ -0.21
TDP2-204ENST00000478507 SEL1LQ9UBV2 794 aa13.73□□□□□ -0.21
TDP2-204ENST00000478507 GTF3C4Q9UKN8 822 aa13.73□□□□□ -0.21
TDP2-204ENST00000478507 AGAP1Q9UPQ3 857 aa13.73□□□□□ -0.21
TDP2-204ENST00000478507 WASF3Q9UPY6 502 aa13.73□□□□□ -0.21
TDP2-204ENST00000478507 WNT6Q9Y6F9 365 aa13.73□□□□□ -0.21
TDP2-204ENST00000478507 THADAQ6YHU6 1953 aa13.72□□□□□ -0.21
TDP2-204ENST00000478507 CACNA1GO43497 2377 aa13.72□□□□□ -0.21
TDP2-204ENST00000478507 LNP1A1A4G5 178 aa13.72□□□□□ -0.21
TDP2-204ENST00000478507 C2orf78A6NCI8 922 aa13.72□□□□□ -0.21
TDP2-204ENST00000478507 USP17L7P0C7H9 530 aa13.72□□□□□ -0.21
TDP2-204ENST00000478507 CASP5P51878 434 aa13.72□□□□□ -0.21
TDP2-204ENST00000478507 TFAMQ00059 246 aaKnown RBP13.72□□□□□ -0.21
TDP2-204ENST00000478507 SF3A1Q15459 793 aaKnown RBP13.72□□□□□ -0.21
TDP2-204ENST00000478507 SOWAHAQ2M3V2 549 aa13.72□□□□□ -0.21
TDP2-204ENST00000478507 L1TD1Q5T7N2 865 aaKnown RBP13.72□□□□□ -0.21
TDP2-204ENST00000478507 RNF43Q68DV7 783 aa13.72□□□□□ -0.21
TDP2-204ENST00000478507 FAM171BQ6P995 826 aa13.72□□□□□ -0.21
TDP2-204ENST00000478507 DYMQ7RTS9 669 aa13.72□□□□□ -0.21
TDP2-204ENST00000478507 RASSF3Q86WH2 238 aa13.72□□□□□ -0.21
TDP2-204ENST00000478507 TOP6BLQ8N6T0 577 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms