RNA–Protein interactions for RNA: ENST00000478459.5

EPHB4-205, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 965 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-205ENST00000478459 GREB1Q4ZG55 1949 aa20.4■□□□□ 0.86
EPHB4-205ENST00000478459 TXNDC8Q6A555 127 aa20.4■□□□□ 0.86
EPHB4-205ENST00000478459 TMEM150AQ86TG1 271 aa20.4■□□□□ 0.86
EPHB4-205ENST00000478459 C12orf56Q8IXR9 622 aa20.4■□□□□ 0.86
EPHB4-205ENST00000478459 DDX23Q9BUQ8 820 aaKnown RBP20.4■□□□□ 0.86
EPHB4-205ENST00000478459 GPR88Q9GZN0 384 aa20.4■□□□□ 0.86
EPHB4-205ENST00000478459 SMYD3Q9H7B4 428 aa20.4■□□□□ 0.86
EPHB4-205ENST00000478459 MMRN2Q9H8L6 949 aa20.4■□□□□ 0.86
EPHB4-205ENST00000478459 CCL26Q9Y258 94 aa20.4■□□□□ 0.86
EPHB4-205ENST00000478459 PIAS3Q9Y6X2 628 aa20.4■□□□□ 0.86
EPHB4-205ENST00000478459 CDC25CP30307 473 aa20.39■□□□□ 0.85
EPHB4-205ENST00000478459 GNL1P36915 607 aaPredicted RBP20.39■□□□□ 0.85
EPHB4-205ENST00000478459 NLRP12P59046 1061 aa20.39■□□□□ 0.85
EPHB4-205ENST00000478459 SNRPFP62306 86 aaKnown RBP20.39■□□□□ 0.85
EPHB4-205ENST00000478459 SMARCB1Q12824 385 aa20.39■□□□□ 0.85
EPHB4-205ENST00000478459 IFRD2Q12894 506 aaPredicted RBP20.39■□□□□ 0.85
EPHB4-205ENST00000478459 ORC1Q13415 861 aa20.39■□□□□ 0.85
EPHB4-205ENST00000478459 PNOCQ13519 176 aa20.39■□□□□ 0.85
EPHB4-205ENST00000478459 ZNF852Q6ZMS4 543 aa20.39■□□□□ 0.85
EPHB4-205ENST00000478459 ASCL5Q7RTU5 278 aa20.39■□□□□ 0.85
EPHB4-205ENST00000478459 GOLGA5Q8TBA6 731 aa20.39■□□□□ 0.85
EPHB4-205ENST00000478459 CSGALNACT1Q8TDX6 532 aa20.39■□□□□ 0.85
EPHB4-205ENST00000478459 DEPDC1BQ8WUY9 529 aa20.39■□□□□ 0.85
EPHB4-205ENST00000478459 IRF7Q92985 503 aa20.39■□□□□ 0.85
EPHB4-205ENST00000478459 EEF2KMTQ96G04 330 aa20.39■□□□□ 0.85
EPHB4-205ENST00000478459 TASP1Q9H6P5 420 aa20.39■□□□□ 0.85
EPHB4-205ENST00000478459 TRPV4Q9HBA0 871 aa20.39■□□□□ 0.85
EPHB4-205ENST00000478459 MAGEC2Q9UBF1 373 aaPredicted RBP20.39■□□□□ 0.85
EPHB4-205ENST00000478459 FRYLO94915 3013 aa20.39■□□□□ 0.85
EPHB4-205ENST00000478459 ANAPC1Q9H1A4 1944 aa20.38■□□□□ 0.85
EPHB4-205ENST00000478459 FAM237AA0A1B0GTK4 181 aa20.38■□□□□ 0.85
EPHB4-205ENST00000478459 A0A1W2PQ27 194 aa20.38■□□□□ 0.85
EPHB4-205ENST00000478459 A0A1W2PQ64 194 aa20.38■□□□□ 0.85
EPHB4-205ENST00000478459 A0A1W2PQD8 194 aa20.38■□□□□ 0.85
EPHB4-205ENST00000478459 F11P03951 625 aa20.38■□□□□ 0.85
EPHB4-205ENST00000478459 WARSP23381 471 aaKnown RBP20.38■□□□□ 0.85
EPHB4-205ENST00000478459 CCNE1P24864 410 aa20.38■□□□□ 0.85
EPHB4-205ENST00000478459 GRIK1P39086 918 aa20.38■□□□□ 0.85
EPHB4-205ENST00000478459 RPL10AP62906 217 aaKnown RBP20.38■□□□□ 0.85
EPHB4-205ENST00000478459 TNK2Q07912 1038 aa20.38■□□□□ 0.85
EPHB4-205ENST00000478459 TSSK4Q6SA08 328 aa20.38■□□□□ 0.85
EPHB4-205ENST00000478459 PARD3BQ8TEW8 1205 aa20.38■□□□□ 0.85
EPHB4-205ENST00000478459 DNASE1L2Q92874 299 aa20.38■□□□□ 0.85
EPHB4-205ENST00000478459 CCDC47Q96A33 483 aaKnown RBP20.38■□□□□ 0.85
EPHB4-205ENST00000478459 BCO2Q9BYV7 579 aa20.38■□□□□ 0.85
EPHB4-205ENST00000478459 IRF2BPLQ9H1B7 796 aa20.38■□□□□ 0.85
EPHB4-205ENST00000478459 DMAC2Q9NW81 257 aa20.38■□□□□ 0.85
EPHB4-205ENST00000478459 GTSE1Q9NYZ3 720 aa20.38■□□□□ 0.85
EPHB4-205ENST00000478459 CGNQ9P2M7 1197 aaKnown RBP20.38■□□□□ 0.85
EPHB4-205ENST00000478459 CDH9Q9ULB4 789 aa20.38■□□□□ 0.85
EPHB4-205ENST00000478459 CLDN5O00501 218 aa20.37■□□□□ 0.85
EPHB4-205ENST00000478459 PDXKO00764 312 aa20.37■□□□□ 0.85
EPHB4-205ENST00000478459 TADA3O75528 432 aa20.37■□□□□ 0.85
EPHB4-205ENST00000478459 VNN1O95497 513 aa20.37■□□□□ 0.85
EPHB4-205ENST00000478459 FGF19O95750 216 aa20.37■□□□□ 0.85
EPHB4-205ENST00000478459 TRIM49P0CI25 452 aa20.37■□□□□ 0.85
EPHB4-205ENST00000478459 TRIM49CP0CI26 452 aa20.37■□□□□ 0.85
EPHB4-205ENST00000478459 CSH1P0DML2 217 aa20.37■□□□□ 0.85
EPHB4-205ENST00000478459 CSH2P0DML3 217 aa20.37■□□□□ 0.85
EPHB4-205ENST00000478459 KPNA1P52294 538 aaPredicted RBP20.37■□□□□ 0.85
EPHB4-205ENST00000478459 CACNA2D1P54289 1103 aa20.37■□□□□ 0.85
EPHB4-205ENST00000478459 NCOA4Q13772 614 aa20.37■□□□□ 0.85
EPHB4-205ENST00000478459 ZNF699Q32M78 642 aa20.37■□□□□ 0.85
EPHB4-205ENST00000478459 TRIM68Q6AZZ1 485 aa20.37■□□□□ 0.85
EPHB4-205ENST00000478459 SPOPLQ6IQ16 392 aa20.37■□□□□ 0.85
EPHB4-205ENST00000478459 FAM171BQ6P995 826 aa20.37■□□□□ 0.85
EPHB4-205ENST00000478459 DPH6Q7L8W6 267 aa20.37■□□□□ 0.85
EPHB4-205ENST00000478459 LIMS2Q7Z4I7 341 aa20.37■□□□□ 0.85
EPHB4-205ENST00000478459 C1orf210Q8IVY1 113 aa20.37■□□□□ 0.85
EPHB4-205ENST00000478459 PCED1BQ96HM7 432 aa20.37■□□□□ 0.85
EPHB4-205ENST00000478459 CYP2S1Q96SQ9 504 aa20.37■□□□□ 0.85
EPHB4-205ENST00000478459 SDCBP2Q9H190 292 aa20.37■□□□□ 0.85
EPHB4-205ENST00000478459 XYLT2Q9H1B5 865 aa20.37■□□□□ 0.85
EPHB4-205ENST00000478459 MYH10P35580 1976 aa20.37■□□□□ 0.85
EPHB4-205ENST00000478459 GOLGA6L4A6NEF3 574 aa20.36■□□□□ 0.85
EPHB4-205ENST00000478459 A8MXQ7 604 aa20.36■□□□□ 0.85
EPHB4-205ENST00000478459 CALUO43852 315 aaPredicted RBP20.36■□□□□ 0.85
EPHB4-205ENST00000478459 RHOBTB3O94955 611 aa20.36■□□□□ 0.85
EPHB4-205ENST00000478459 USP46P62068 366 aa20.36■□□□□ 0.85
EPHB4-205ENST00000478459 C4orf50Q6ZRC1 276 aa20.36■□□□□ 0.85
EPHB4-205ENST00000478459 CMTM8Q8IZV2 173 aa20.36■□□□□ 0.85
EPHB4-205ENST00000478459 FAM3CQ92520 227 aa20.36■□□□□ 0.85
EPHB4-205ENST00000478459 MRPS31Q92665 395 aaKnown RBP20.36■□□□□ 0.85
EPHB4-205ENST00000478459 SLC22A12Q96S37 553 aa20.36■□□□□ 0.85
EPHB4-205ENST00000478459 RBM12Q9NTZ6 932 aaKnown RBP20.36■□□□□ 0.85
EPHB4-205ENST00000478459 CFAP54Q96N23 3096 aa20.36■□□□□ 0.85
EPHB4-205ENST00000478459 ARNTLO00327 626 aa20.35■□□□□ 0.85
EPHB4-205ENST00000478459 C4BPAP04003 597 aaKnown RBP20.35■□□□□ 0.85
EPHB4-205ENST00000478459 SP9P0CG40 484 aa20.35■□□□□ 0.85
EPHB4-205ENST00000478459 PTPN1P18031 435 aaKnown RBP20.35■□□□□ 0.85
EPHB4-205ENST00000478459 NR2F2P24468 414 aa20.35■□□□□ 0.85
EPHB4-205ENST00000478459 AVPR1AP37288 418 aa20.35■□□□□ 0.85
EPHB4-205ENST00000478459 NBL1P41271 181 aa20.35■□□□□ 0.85
EPHB4-205ENST00000478459 CSTF1Q05048 431 aaKnown RBP20.35■□□□□ 0.85
EPHB4-205ENST00000478459 ISM2Q6H9L7 571 aa20.35■□□□□ 0.85
EPHB4-205ENST00000478459 MAML2Q8IZL2 1156 aaPredicted RBP20.35■□□□□ 0.85
EPHB4-205ENST00000478459 RIN3Q8TB24 985 aa20.35■□□□□ 0.85
EPHB4-205ENST00000478459 MYCBPAPQ8TBZ2 947 aa20.35■□□□□ 0.85
EPHB4-205ENST00000478459 BPIFB1Q8TDL5 484 aa20.35■□□□□ 0.85
EPHB4-205ENST00000478459 USP13Q92995 863 aaPredicted RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms