RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 CYP2F1P24903 491 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 GBP2P32456 591 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-222ENST00000478095 ALDH1A3P47895 512 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 EPHB3P54753 998 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 SMARCB1Q12824 385 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 NFE2Q16621 373 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-222ENST00000478095 DDR2Q16832 855 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 ANO6Q4KMQ2 910 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 PABPC1LQ4VXU2 614 aaKnown RBP10.95□□□□□ -0.66
HDAC6-222ENST00000478095 ZNF394Q53GI3 561 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 CT47A1Q5JQC4 288 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-222ENST00000478095 FAM171BQ6P995 826 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 CYP26C1Q6V0L0 522 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 ACOT1Q86TX2 421 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 FAM114A1Q8IWE2 563 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 SCN4BQ8IWT1 228 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 GJD3Q8N144 294 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 ELMOD1Q8N336 334 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 TDRD5Q8NAT2 981 aaKnown RBP10.95□□□□□ -0.66
HDAC6-222ENST00000478095 B3GALNT2Q8NCR0 500 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 ST13P5Q8NFI4 369 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-222ENST00000478095 ENOX1Q8TC92 643 aaKnown RBP10.95□□□□□ -0.66
HDAC6-222ENST00000478095 FAM200AQ8TCP9 573 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 GIPC2Q8TF65 315 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 C2orf15Q8WU43 125 aaKnown RBP10.95□□□□□ -0.66
HDAC6-222ENST00000478095 ING5Q8WYH8 240 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 PCED1BQ96HM7 432 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 TWNKQ96RR1 684 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 PLSCR2Q9NRY7 297 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 PRKAG3Q9UGI9 489 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 MAFFQ9ULX9 164 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 KCNJ18B7U540 433 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 LOC730098B7Z3J9 87 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 NRG2O14511 850 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-222ENST00000478095 CILPO75339 1184 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 POU2F2P09086 479 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 MYL4P12829 197 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 PRKCSHP14314 528 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-222ENST00000478095 GJA1P17302 382 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 PTPN2P17706 415 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 TUFMP49411 452 aaKnown RBP10.94□□□□□ -0.66
HDAC6-222ENST00000478095 MYL5Q02045 173 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 CETN1Q12798 172 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 PLD1Q13393 1074 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 CUL2Q13617 745 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 KCNJ12Q14500 433 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 VEPH1Q14D04 833 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 MAPRE1Q15691 268 aaKnown RBP10.94□□□□□ -0.66
HDAC6-222ENST00000478095 SLC5A9Q2M3M2 681 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 CFAP221Q4G0U5 840 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 IQCEQ6IPM2 695 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 C4orf50Q6ZRC1 276 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 RTL10Q7L3V2 364 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 AOPEPQ8N6M6 819 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 LMO3Q8TAP4 145 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 ITFG1Q8TB96 612 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 MYCBPAPQ8TBZ2 947 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 KAT5Q92993 513 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 TCEAL4Q96EI5 215 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 TNIP3Q96KP6 325 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 ZNF512Q96ME7 567 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-222ENST00000478095 MYADMQ96S97 322 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 CRACR2AQ9BSW2 395 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 B3GNT5Q9BYG0 378 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 ZNF518BQ9C0D4 1074 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 ELOVL4Q9GZR5 314 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 INTS2Q9H0H0 1204 aaKnown RBP10.94□□□□□ -0.66
HDAC6-222ENST00000478095 CYP3A43Q9HB55 503 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 ZNF334Q9HCZ1 680 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-222ENST00000478095 FAM49BQ9NUQ9 324 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 FANCLQ9NW38 375 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 TAB2Q9NYJ8 693 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 GCNT4Q9P109 453 aa10.94□□□□□ -0.66
HDAC6-222ENST00000478095 PES1O00541 588 aaKnown RBP10.93□□□□□ -0.66
HDAC6-222ENST00000478095 PMM2O15305 246 aa10.93□□□□□ -0.66
HDAC6-222ENST00000478095 P4HA2O15460 535 aa10.93□□□□□ -0.66
HDAC6-222ENST00000478095 CCDC130P13994 396 aa10.93□□□□□ -0.66
HDAC6-222ENST00000478095 CEBPBP17676 345 aa10.93□□□□□ -0.66
HDAC6-222ENST00000478095 CCR2P41597 374 aa10.93□□□□□ -0.66
HDAC6-222ENST00000478095 CACNA2D1P54289 1103 aa10.93□□□□□ -0.66
HDAC6-222ENST00000478095 APBA1Q02410 837 aa10.93□□□□□ -0.66
HDAC6-222ENST00000478095 INCA1Q0VD86 236 aa10.93□□□□□ -0.66
HDAC6-222ENST00000478095 MTMR3Q13615 1198 aa10.93□□□□□ -0.66
HDAC6-222ENST00000478095 MAN2A1Q16706 1144 aa10.93□□□□□ -0.66
HDAC6-222ENST00000478095 TCP11X2Q5H9J9 407 aa10.93□□□□□ -0.66
HDAC6-222ENST00000478095 PDZD4Q76G19 769 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-222ENST00000478095 RRAGAQ7L523 313 aa10.93□□□□□ -0.66
HDAC6-222ENST00000478095 OTOP3Q7RTS5 596 aa10.93□□□□□ -0.66
HDAC6-222ENST00000478095 UNC93AQ86WB7 457 aa10.93□□□□□ -0.66
HDAC6-222ENST00000478095 ARHGEF19Q8IW93 802 aa10.93□□□□□ -0.66
HDAC6-222ENST00000478095 ZNF687Q8N1G0 1237 aa10.93□□□□□ -0.66
HDAC6-222ENST00000478095 PPM1KQ8N3J5 372 aa10.93□□□□□ -0.66
HDAC6-222ENST00000478095 C12orf29Q8N999 325 aa10.93□□□□□ -0.66
HDAC6-222ENST00000478095 EHBP1Q8NDI1 1231 aa10.93□□□□□ -0.66
HDAC6-222ENST00000478095 WHAMMQ8TF30 809 aa10.93□□□□□ -0.66
HDAC6-222ENST00000478095 PSMG2Q969U7 264 aa10.93□□□□□ -0.66
HDAC6-222ENST00000478095 ACSF2Q96CM8 615 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-222ENST00000478095 FUBP3Q96I24 572 aaKnown RBP eCLIP10.93□□□□□ -0.66
HDAC6-222ENST00000478095 NT5C1BQ96P26 610 aa10.93□□□□□ -0.66
HDAC6-222ENST00000478095 TUBGCP2Q9BSJ2 902 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms