RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 TMEM39BQ9GZU3 492 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 KIAA1683Q9H0B3 1180 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 DDX47Q9H0S4 455 aaKnown RBP5.29□□□□□ -1.56
SF3B6-202ENST00000478050 IKZF4Q9H2S9 585 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 PRO3102Q9H379 93 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 SEMA6CQ9H3T2 930 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 GOLPH3Q9H4A6 298 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 TMBIM4Q9HC24 238 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 UBE2TQ9NPD8 197 aaPredicted RBP5.29□□□□□ -1.56
SF3B6-202ENST00000478050 SEPT11Q9NVA2 429 aaKnown RBP5.29□□□□□ -1.56
SF3B6-202ENST00000478050 HSPBP1Q9NZL4 362 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 COL20A1Q9P218 1284 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 PGAP2Q9UHJ9 254 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 FAM153AQ9UHL3 310 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 RSPH14Q9UHP6 348 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 RASAL2Q9UJF2 1139 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 ZNRF3Q9ULT6 936 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 PLAAQ9Y263 795 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 UTP11Q9Y3A2 253 aaKnown RBP5.29□□□□□ -1.56
SF3B6-202ENST00000478050 TRIM17Q9Y577 477 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 CTDP1Q9Y5B0 961 aaPredicted RBP5.29□□□□□ -1.56
SF3B6-202ENST00000478050 ZHX2Q9Y6X8 837 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 PAPPA2Q9BXP8 1791 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 GRIN2DO15399 1336 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 ASTN2O75129 1339 aaPredicted RBP5.28□□□□□ -1.56
SF3B6-202ENST00000478050 IGSF9BQ9UPX0 1349 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 ZNF233A6NK53 670 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 FAM155AB1AL88 458 aaPredicted RBP5.28□□□□□ -1.56
SF3B6-202ENST00000478050 FOXN3O00409 490 aaPredicted RBP5.28□□□□□ -1.56
SF3B6-202ENST00000478050 EBAG9O00559 213 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 NFIBO00712 420 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 MAFGO15525 162 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 CPNE3O75131 537 aaKnown RBP5.28□□□□□ -1.56
SF3B6-202ENST00000478050 ZBED4O75132 1171 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 PHF2O75151 1096 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 LRRN2O75325 713 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 FGGP02679 453 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 RNASE1P07998 156 aaKnown RBP5.28□□□□□ -1.56
SF3B6-202ENST00000478050 MYZAPP0CAP1 466 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 GZMAP12544 262 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 ALAS1P13196 640 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 NR1D1P20393 614 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 ABCB4P21439 1286 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 EIF4BP23588 611 aaKnown RBP5.28□□□□□ -1.56
SF3B6-202ENST00000478050 ECHS1P30084 290 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 CCND2P30279 289 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 YWHABP31946 246 aaKnown RBP5.28□□□□□ -1.56
SF3B6-202ENST00000478050 GTF2H1P32780 548 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 HSD17B3P37058 310 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 MAGEA9P43362 315 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 ASPAP45381 313 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 DRG2P55039 364 aaKnown RBP5.28□□□□□ -1.56
SF3B6-202ENST00000478050 MFAP3P55082 362 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 EIF3BP55884 814 aaKnown RBP5.28□□□□□ -1.56
SF3B6-202ENST00000478050 CORO7P57737 925 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 GPC5P78333 572 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 MRPS9P82933 396 aaKnown RBP5.28□□□□□ -1.56
SF3B6-202ENST00000478050 POU5F1Q01860 360 aaKnown RBP5.28□□□□□ -1.56
SF3B6-202ENST00000478050 PPP3CAQ08209 521 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 SLC20A2Q08357 652 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 ITGB3BPQ13352 177 aaPredicted RBP5.28□□□□□ -1.56
SF3B6-202ENST00000478050 BIRC3Q13489 604 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 MTMR1Q13613 665 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 RASA3Q14644 834 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 PGM5Q15124 567 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 XKR9Q5GH70 373 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 CEP85LQ5SZL2 805 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 SEL1L2Q5TEA6 688 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 ZNF746Q6NUN9 644 aaPredicted RBP5.28□□□□□ -1.56
SF3B6-202ENST00000478050 XKR5Q6UX68 686 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 B4GALNT4Q76KP1 1039 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 MIGA2Q7L4E1 593 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 OTUD6AQ7L8S5 288 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 CROCCP2Q86T23 111 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 NLRX1Q86UT6 975 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 ARHGEF19Q8IW93 802 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 FAM71AQ8IYT1 594 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 RPUSD2Q8IZ73 545 aaKnown RBP5.28□□□□□ -1.56
SF3B6-202ENST00000478050 C2orf69Q8N8R5 385 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 BHLHE22Q8NFJ8 381 aaPredicted RBP5.28□□□□□ -1.56
SF3B6-202ENST00000478050 IL31RAQ8NI17 732 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 BCAS4Q8TDM0 211 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 JDP2Q8WYK2 163 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 KIFAP3Q92845 792 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 ARHGEF26Q96DR7 871 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 CRELD1Q96HD1 420 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 RNPC3Q96LT9 517 aaKnown RBP5.28□□□□□ -1.56
SF3B6-202ENST00000478050 RPS6KC1Q96S38 1066 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 SENP7Q9BQF6 1050 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 CBWD1Q9BRT8 395 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 AP1M1Q9BXS5 423 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 GLIS2Q9BZE0 524 aaPredicted RBP5.28□□□□□ -1.56
SF3B6-202ENST00000478050 MAF1Q9H063 256 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 WNT8AQ9H1J5 351 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 PCIF1Q9H4Z3 704 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 C17orf75Q9HAS0 396 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 ZFYVE1Q9HBF4 777 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 SLC38A10Q9HBR0 1119 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 ZNF277Q9NRM2 450 aaPredicted RBP5.28□□□□□ -1.56
SF3B6-202ENST00000478050 MBNL3Q9NUK0 354 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms