RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 CHRM3P20309 590 aa4.4□□□□□ -1.71
NCKAP1-204ENST00000477988 IL10RAQ13651 578 aa4.4□□□□□ -1.71
NCKAP1-204ENST00000477988 ERV3-1Q14264 604 aa4.4□□□□□ -1.71
NCKAP1-204ENST00000477988 KRT81Q14533 505 aa4.4□□□□□ -1.71
NCKAP1-204ENST00000477988 RBMS2Q15434 407 aaKnown RBP4.4□□□□□ -1.71
NCKAP1-204ENST00000477988 CT47A1Q5JQC4 288 aaPredicted RBP4.4□□□□□ -1.71
NCKAP1-204ENST00000477988 C10orf25Q5T742 122 aa4.4□□□□□ -1.71
NCKAP1-204ENST00000477988 MEX3CQ5U5Q3 659 aaKnown RBP4.4□□□□□ -1.71
NCKAP1-204ENST00000477988 RNF219Q5W0B1 726 aaPredicted RBP4.4□□□□□ -1.71
NCKAP1-204ENST00000477988 SLC4A10Q6U841 1118 aa4.4□□□□□ -1.71
NCKAP1-204ENST00000477988 ZNF813Q6ZN06 617 aa4.4□□□□□ -1.71
NCKAP1-204ENST00000477988 Q6ZTC4 211 aa4.4□□□□□ -1.71
NCKAP1-204ENST00000477988 TTC7BQ86TV6 843 aa4.4□□□□□ -1.71
NCKAP1-204ENST00000477988 LRRC71Q8N4P6 559 aa4.4□□□□□ -1.71
NCKAP1-204ENST00000477988 WDR66Q8TBY9 1149 aa4.4□□□□□ -1.71
NCKAP1-204ENST00000477988 NSUN6Q8TEA1 469 aaKnown RBP4.4□□□□□ -1.71
NCKAP1-204ENST00000477988 CUL5Q93034 780 aa4.4□□□□□ -1.71
NCKAP1-204ENST00000477988 MACROD1Q9BQ69 325 aa4.4□□□□□ -1.71
NCKAP1-204ENST00000477988 MRPS18AQ9NVS2 196 aaKnown RBP4.4□□□□□ -1.71
NCKAP1-204ENST00000477988 KLHL13Q9P2N7 655 aa4.4□□□□□ -1.71
NCKAP1-204ENST00000477988 CFAP20Q9Y6A4 193 aaKnown RBP4.4□□□□□ -1.71
NCKAP1-204ENST00000477988 PRSS29PA6NIE9 313 aa4.39□□□□□ -1.71
NCKAP1-204ENST00000477988 CD8B2A6NJW9 211 aa4.39□□□□□ -1.71
NCKAP1-204ENST00000477988 DSCR3O14972 297 aa4.39□□□□□ -1.71
NCKAP1-204ENST00000477988 VPS4BO75351 444 aa4.39□□□□□ -1.71
NCKAP1-204ENST00000477988 KIF20AO95235 890 aa4.39□□□□□ -1.71
NCKAP1-204ENST00000477988 ALPLP05186 524 aa4.39□□□□□ -1.71
NCKAP1-204ENST00000477988 FTH1P19P0C7X4 201 aa4.39□□□□□ -1.71
NCKAP1-204ENST00000477988 EDNRBP24530 442 aa4.39□□□□□ -1.71
NCKAP1-204ENST00000477988 MT3P25713 68 aa4.39□□□□□ -1.71
NCKAP1-204ENST00000477988 CLCN2P51788 898 aa4.39□□□□□ -1.71
NCKAP1-204ENST00000477988 PDE1AP54750 535 aa4.39□□□□□ -1.71
NCKAP1-204ENST00000477988 SNAPC2Q13487 334 aa4.39□□□□□ -1.71
NCKAP1-204ENST00000477988 SEMA3AQ14563 771 aa4.39□□□□□ -1.71
NCKAP1-204ENST00000477988 KIF22Q14807 665 aa4.39□□□□□ -1.71
NCKAP1-204ENST00000477988 CLUL1Q15846 466 aa4.39□□□□□ -1.71
NCKAP1-204ENST00000477988 TMEM108Q6UXF1 575 aa4.39□□□□□ -1.71
NCKAP1-204ENST00000477988 C9orf47Q6ZRZ4 202 aa4.39□□□□□ -1.71
NCKAP1-204ENST00000477988 LIMCH1Q9UPQ0 1083 aa4.39□□□□□ -1.71
NCKAP1-204ENST00000477988 AGAP1Q9UPQ3 857 aa4.39□□□□□ -1.71
NCKAP1-204ENST00000477988 PRF1P14222 555 aa4.38□□□□□ -1.71
NCKAP1-204ENST00000477988 SMARCA1P28370 1054 aa4.38□□□□□ -1.71
NCKAP1-204ENST00000477988 KCNJ5P48544 419 aa4.38□□□□□ -1.71
NCKAP1-204ENST00000477988 C3orf36Q3SXR2 165 aa4.38□□□□□ -1.71
NCKAP1-204ENST00000477988 LEXMQ3ZCV2 418 aa4.38□□□□□ -1.71
NCKAP1-204ENST00000477988 KHDC1Q4VXA5 237 aaKnown RBP4.38□□□□□ -1.71
NCKAP1-204ENST00000477988 FCRL6Q6DN72 434 aa4.38□□□□□ -1.71
NCKAP1-204ENST00000477988 KIRREL2Q6UWL6 708 aa4.38□□□□□ -1.71
NCKAP1-204ENST00000477988 LHFPL2Q6ZUX7 228 aa4.38□□□□□ -1.71
NCKAP1-204ENST00000477988 ACRBPQ8NEB7 543 aa4.38□□□□□ -1.71
NCKAP1-204ENST00000477988 ABHD11Q8NFV4 315 aa4.38□□□□□ -1.71
NCKAP1-204ENST00000477988 JADE3Q92613 823 aa4.38□□□□□ -1.71
NCKAP1-204ENST00000477988 SNX18Q96RF0 628 aa4.38□□□□□ -1.71
NCKAP1-204ENST00000477988 VRK1Q99986 396 aaPredicted RBP4.38□□□□□ -1.71
NCKAP1-204ENST00000477988 THAP7Q9BT49 309 aaPredicted RBP4.38□□□□□ -1.71
NCKAP1-204ENST00000477988 CCDC154A6NI56 674 aa4.37□□□□□ -1.71
NCKAP1-204ENST00000477988 ABLIM3O94929 683 aa4.37□□□□□ -1.71
NCKAP1-204ENST00000477988 ARIH2O95376 493 aa4.37□□□□□ -1.71
NCKAP1-204ENST00000477988 FESP07332 822 aa4.37□□□□□ -1.71
NCKAP1-204ENST00000477988 DLDP09622 509 aaKnown RBP4.37□□□□□ -1.71
NCKAP1-204ENST00000477988 C5AR1P21730 350 aa4.37□□□□□ -1.71
NCKAP1-204ENST00000477988 PPIFP30405 207 aaKnown RBP4.37□□□□□ -1.71
NCKAP1-204ENST00000477988 PIK3CGP48736 1102 aa4.37□□□□□ -1.71
NCKAP1-204ENST00000477988 FXR1P51114 621 aaKnown RBP eCLIP4.37□□□□□ -1.71
NCKAP1-204ENST00000477988 NANOS2P60321 138 aaKnown RBP4.37□□□□□ -1.71
NCKAP1-204ENST00000477988 SRSF1Q07955 248 aaKnown RBP eCLIP4.37□□□□□ -1.71
NCKAP1-204ENST00000477988 TRIM71Q2Q1W2 868 aaKnown RBP4.37□□□□□ -1.71
NCKAP1-204ENST00000477988 Q6ZWC4 215 aa4.37□□□□□ -1.71
NCKAP1-204ENST00000477988 USP37Q86T82 979 aa4.37□□□□□ -1.71
NCKAP1-204ENST00000477988 TERB1Q8NA31 727 aa4.37□□□□□ -1.71
NCKAP1-204ENST00000477988 SLKQ9H2G2 1235 aaPredicted RBP4.37□□□□□ -1.71
NCKAP1-204ENST00000477988 GLOD4Q9HC38 313 aa4.37□□□□□ -1.71
NCKAP1-204ENST00000477988 ZDHHC8Q9ULC8 765 aa4.37□□□□□ -1.71
NCKAP1-204ENST00000477988 GNAI2P04899 355 aa4.36□□□□□ -1.71
NCKAP1-204ENST00000477988 GPSM2P81274 684 aa4.36□□□□□ -1.71
NCKAP1-204ENST00000477988 GHRHRQ02643 423 aa4.36□□□□□ -1.71
NCKAP1-204ENST00000477988 ZNF268Q14587 947 aaPredicted RBP4.36□□□□□ -1.71
NCKAP1-204ENST00000477988 NPY5RQ15761 445 aa4.36□□□□□ -1.71
NCKAP1-204ENST00000477988 FAM160B1Q5W0V3 765 aa4.36□□□□□ -1.71
NCKAP1-204ENST00000477988 FAM90A1Q86YD7 464 aa4.36□□□□□ -1.71
NCKAP1-204ENST00000477988 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.36□□□□□ -1.71
NCKAP1-204ENST00000477988 COG1Q8WTW3 980 aa4.36□□□□□ -1.71
NCKAP1-204ENST00000477988 KAT5Q92993 513 aa4.36□□□□□ -1.71
NCKAP1-204ENST00000477988 COA7Q96BR5 231 aa4.36□□□□□ -1.71
NCKAP1-204ENST00000477988 POLHQ9Y253 713 aa4.36□□□□□ -1.71
NCKAP1-204ENST00000477988 TTC3P53804 2025 aa4.35□□□□□ -1.71
NCKAP1-204ENST00000477988 A1L4Q6 167 aa4.35□□□□□ -1.71
NCKAP1-204ENST00000477988 EME2A4GXA9 379 aaPredicted RBP4.35□□□□□ -1.71
NCKAP1-204ENST00000477988 PRSS44E7EML9 344 aa4.35□□□□□ -1.71
NCKAP1-204ENST00000477988 A1BGP04217 495 aa4.35□□□□□ -1.71
NCKAP1-204ENST00000477988 PRDX5P30044 214 aa4.35□□□□□ -1.71
NCKAP1-204ENST00000477988 TPTEP56180 551 aa4.35□□□□□ -1.71
NCKAP1-204ENST00000477988 LOXL3P58215 753 aa4.35□□□□□ -1.71
NCKAP1-204ENST00000477988 BOP1Q14137 746 aaKnown RBP4.35□□□□□ -1.71
NCKAP1-204ENST00000477988 PTDSS2Q9BVG9 487 aa4.35□□□□□ -1.71
NCKAP1-204ENST00000477988 FOXP1Q9H334 677 aaPredicted RBP4.35□□□□□ -1.71
NCKAP1-204ENST00000477988 POT1Q9NUX5 634 aa4.35□□□□□ -1.71
NCKAP1-204ENST00000477988 PI4KBQ9UBF8 816 aa4.35□□□□□ -1.71
NCKAP1-204ENST00000477988 SERTAD3Q9UJW9 196 aa4.35□□□□□ -1.71
NCKAP1-204ENST00000477988 GABRQQ9UN88 632 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms